RNA–Protein interactions for RNA: ENST00000508836.1

C4orf46-203, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 1 (best)

Gene C4orf46, Length 1,103 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-203ENST00000508836 SMARCC1Q92922 1105 aaPredicted RBP15.48■□□□□ 0.07
C4orf46-203ENST00000508836 SLC12A5Q9H2X9 1139 aa15.48■□□□□ 0.07
C4orf46-203ENST00000508836 MMP10P09238 476 aa15.47■□□□□ 0.07
C4orf46-203ENST00000508836 USHBP1Q8N6Y0 703 aa15.47■□□□□ 0.07
C4orf46-203ENST00000508836 A0A1W2PP64 1363 aa15.47■□□□□ 0.07
C4orf46-203ENST00000508836 PLEKHG2Q9H7P9 1386 aa15.47■□□□□ 0.07
C4orf46-203ENST00000508836 PCDH11XQ9BZA7 1347 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 PCDH11YQ9BZA8 1340 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 A0A0G2JLW4 131 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 FCHSD2O94868 740 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 FBLN1P23142 703 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 NBPF6Q5VWK0 638 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 C9orf131Q5VYM1 1079 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 L3MBTL2Q969R5 705 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 NBPF4Q96M43 638 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 TERF2IPQ9NYB0 399 aa15.46■□□□□ 0.07
C4orf46-203ENST00000508836 KCPQ6ZWJ8 1503 aa15.45■□□□□ 0.06
C4orf46-203ENST00000508836 HSPA1AP0DMV8 641 aaKnown RBP15.45■□□□□ 0.06
C4orf46-203ENST00000508836 HSPA1BP0DMV9 641 aaKnown RBP15.45■□□□□ 0.06
C4orf46-203ENST00000508836 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
C4orf46-203ENST00000508836 TGFB2P61812 414 aa15.45■□□□□ 0.06
C4orf46-203ENST00000508836 PKD1L3Q7Z443 1732 aa15.45■□□□□ 0.06
C4orf46-203ENST00000508836 KDM2BQ8NHM5 1336 aa15.44■□□□□ 0.06
C4orf46-203ENST00000508836 BRCA1P38398 1863 aaKnown RBP15.44■□□□□ 0.06
C4orf46-203ENST00000508836 PCNTO95613 3336 aa15.44■□□□□ 0.06
C4orf46-203ENST00000508836 GNPATO15228 680 aa15.44■□□□□ 0.06
C4orf46-203ENST00000508836 LINC00116Q8NCU8 138 aa15.44■□□□□ 0.06
C4orf46-203ENST00000508836 COG3Q96JB2 828 aa15.44■□□□□ 0.06
C4orf46-203ENST00000508836 MAP2P11137 1827 aaKnown RBP15.44■□□□□ 0.06
C4orf46-203ENST00000508836 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
C4orf46-203ENST00000508836 DPEP1P16444 411 aa15.43■□□□□ 0.06
C4orf46-203ENST00000508836 RRAGCQ9HB90 399 aa15.43■□□□□ 0.06
C4orf46-203ENST00000508836 C10orf71Q711Q0 1435 aa15.43■□□□□ 0.06
C4orf46-203ENST00000508836 SMC1BQ8NDV3 1235 aa15.42■□□□□ 0.06
C4orf46-203ENST00000508836 ARFGEF1Q9Y6D6 1849 aa15.42■□□□□ 0.06
C4orf46-203ENST00000508836 TNRC6CQ9HCJ0 1690 aaKnown RBP15.41■□□□□ 0.06
C4orf46-203ENST00000508836 RTL1A6NKG5 1358 aa15.41■□□□□ 0.06
C4orf46-203ENST00000508836 LOC102724428A0A0B4J2F2 783 aa15.41■□□□□ 0.06
C4orf46-203ENST00000508836 CYP27B1O15528 508 aa15.41■□□□□ 0.06
C4orf46-203ENST00000508836 SLC34A2O95436 690 aa15.41■□□□□ 0.06
C4orf46-203ENST00000508836 SIK1P57059 783 aa15.41■□□□□ 0.06
C4orf46-203ENST00000508836 PIGBQ92521 554 aa15.41■□□□□ 0.06
C4orf46-203ENST00000508836 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
C4orf46-203ENST00000508836 CCDC87Q9NVE4 849 aa15.4■□□□□ 0.06
C4orf46-203ENST00000508836 ITPK1Q13572 414 aa15.39■□□□□ 0.05
C4orf46-203ENST00000508836 RRS1Q15050 365 aaKnown RBP15.39■□□□□ 0.05
C4orf46-203ENST00000508836 RNF181Q9P0P0 153 aa15.39■□□□□ 0.05
C4orf46-203ENST00000508836 NLGN1Q8N2Q7 840 aa15.38■□□□□ 0.05
C4orf46-203ENST00000508836 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
C4orf46-203ENST00000508836 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
C4orf46-203ENST00000508836 ATP6V1AP38606 617 aa15.37■□□□□ 0.05
C4orf46-203ENST00000508836 TMF1P82094 1093 aa15.37■□□□□ 0.05
C4orf46-203ENST00000508836 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
C4orf46-203ENST00000508836 SBF1O95248 1867 aa15.37■□□□□ 0.05
C4orf46-203ENST00000508836 KCNA3P22001 575 aa15.35■□□□□ 0.05
C4orf46-203ENST00000508836 DALRD3Q5D0E6 543 aaKnown RBP15.35■□□□□ 0.05
C4orf46-203ENST00000508836 TRAPPC3LQ5T215 181 aa15.35■□□□□ 0.05
C4orf46-203ENST00000508836 DCAF5Q96JK2 942 aa15.35■□□□□ 0.05
C4orf46-203ENST00000508836 PIM2Q9P1W9 311 aa15.35■□□□□ 0.05
C4orf46-203ENST00000508836 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
C4orf46-203ENST00000508836 RTCBQ9Y3I0 505 aaKnown RBP15.35■□□□□ 0.05
C4orf46-203ENST00000508836 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
C4orf46-203ENST00000508836 TMOD3Q9NYL9 352 aa15.34■□□□□ 0.05
C4orf46-203ENST00000508836 ASAP1Q9ULH1 1129 aa15.34■□□□□ 0.05
C4orf46-203ENST00000508836 PARP3Q9Y6F1 533 aa15.34■□□□□ 0.05
C4orf46-203ENST00000508836 GYS1P13807 737 aa15.32■□□□□ 0.04
C4orf46-203ENST00000508836 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
C4orf46-203ENST00000508836 ARHGEF1Q92888 912 aaKnown RBP15.32■□□□□ 0.04
C4orf46-203ENST00000508836 CARD11Q9BXL7 1154 aa15.32■□□□□ 0.04
C4orf46-203ENST00000508836 INSRP06213 1382 aa15.32■□□□□ 0.04
C4orf46-203ENST00000508836 PUS7Q96PZ0 661 aaKnown RBP15.31■□□□□ 0.04
C4orf46-203ENST00000508836 SIN3AQ96ST3 1273 aa15.31■□□□□ 0.04
C4orf46-203ENST00000508836 VEGFAP15692 232 aaPredicted RBP15.3■□□□□ 0.04
C4orf46-203ENST00000508836 RFC4P35249 363 aa15.3■□□□□ 0.04
C4orf46-203ENST00000508836 FLT4P35916 1363 aa15.3■□□□□ 0.04
C4orf46-203ENST00000508836 GGNBP2Q9H3C7 697 aa15.3■□□□□ 0.04
C4orf46-203ENST00000508836 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
C4orf46-203ENST00000508836 SPG7Q9UQ90 795 aa15.3■□□□□ 0.04
C4orf46-203ENST00000508836 KDRP35968 1356 aa15.28■□□□□ 0.04
C4orf46-203ENST00000508836 ZC3H4Q9UPT8 1303 aaKnown RBP15.28■□□□□ 0.04
C4orf46-203ENST00000508836 CHRNA5P30532 468 aa15.28■□□□□ 0.04
C4orf46-203ENST00000508836 RASSF7Q02833 373 aa15.28■□□□□ 0.04
C4orf46-203ENST00000508836 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
C4orf46-203ENST00000508836 FYB1O15117 783 aa15.27■□□□□ 0.04
C4orf46-203ENST00000508836 MYH14Q7Z406 1995 aaKnown RBP15.27■□□□□ 0.03
C4orf46-203ENST00000508836 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
C4orf46-203ENST00000508836 CNTNAP4Q9C0A0 1308 aa15.26■□□□□ 0.03
C4orf46-203ENST00000508836 GLTPD2A6NH11 291 aa15.26■□□□□ 0.03
C4orf46-203ENST00000508836 RPS6KA4O75676 772 aa15.26■□□□□ 0.03
C4orf46-203ENST00000508836 RC3H1Q5TC82 1133 aaKnown RBP15.26■□□□□ 0.03
C4orf46-203ENST00000508836 SLC4A9Q96Q91 983 aa15.26■□□□□ 0.03
C4orf46-203ENST00000508836 CCDC88AQ3V6T2 1871 aa15.26■□□□□ 0.03
C4orf46-203ENST00000508836 KIF24Q5T7B8 1368 aa15.25■□□□□ 0.03
C4orf46-203ENST00000508836 FOXN1O15353 648 aa15.25■□□□□ 0.03
C4orf46-203ENST00000508836 MKRN1Q9UHC7 482 aaKnown RBP15.25■□□□□ 0.03
C4orf46-203ENST00000508836 KDM6AO15550 1401 aaPredicted RBP15.25■□□□□ 0.03
C4orf46-203ENST00000508836 TIAM2Q8IVF5 1701 aa15.24■□□□□ 0.03
C4orf46-203ENST00000508836 PHKG2P15735 406 aa15.24■□□□□ 0.03
C4orf46-203ENST00000508836 LMNB1P20700 586 aa15.24■□□□□ 0.03
C4orf46-203ENST00000508836 DDR1Q08345 913 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms