RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.7■□□□□ 0.9
NFKB1-207ENST00000508584 LGR6Q9HBX8 967 aa20.7■□□□□ 0.9
NFKB1-207ENST00000508584 BABAM1Q9NWV8 329 aa20.7■□□□□ 0.9
NFKB1-207ENST00000508584 RNMTO43148 476 aaKnown RBP20.69■□□□□ 0.9
NFKB1-207ENST00000508584 BCAR3O75815 825 aa20.69■□□□□ 0.9
NFKB1-207ENST00000508584 PHKG2P15735 406 aa20.69■□□□□ 0.9
NFKB1-207ENST00000508584 TAF7Q15545 349 aaPredicted RBP20.69■□□□□ 0.9
NFKB1-207ENST00000508584 ERICH6BQ5W0A0 696 aa20.69■□□□□ 0.9
NFKB1-207ENST00000508584 IFNL2Q8IZJ0 200 aa20.69■□□□□ 0.9
NFKB1-207ENST00000508584 TSPYL4Q9UJ04 414 aa20.69■□□□□ 0.9
NFKB1-207ENST00000508584 PARP4Q9UKK3 1724 aaKnown RBP20.69■□□□□ 0.9
NFKB1-207ENST00000508584 PKD1L3Q7Z443 1732 aa20.68■□□□□ 0.9
NFKB1-207ENST00000508584 EZH2Q15910 746 aaKnown RBP20.68■□□□□ 0.9
NFKB1-207ENST00000508584 PLIN1O60240 522 aa20.67■□□□□ 0.9
NFKB1-207ENST00000508584 APBA3O96018 575 aa20.67■□□□□ 0.9
NFKB1-207ENST00000508584 ZCRB1Q8TBF4 217 aaKnown RBP20.67■□□□□ 0.9
NFKB1-207ENST00000508584 ZNF428Q96B54 188 aa20.67■□□□□ 0.9
NFKB1-207ENST00000508584 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
NFKB1-207ENST00000508584 TEFQ10587 303 aa20.66■□□□□ 0.9
NFKB1-207ENST00000508584 C8orf58Q8NAV2 365 aa20.66■□□□□ 0.9
NFKB1-207ENST00000508584 PCDH11XQ9BZA7 1347 aa20.65■□□□□ 0.9
NFKB1-207ENST00000508584 PCDH11YQ9BZA8 1340 aa20.65■□□□□ 0.9
NFKB1-207ENST00000508584 CYP27B1O15528 508 aa20.65■□□□□ 0.9
NFKB1-207ENST00000508584 VAMP4O75379 141 aa20.65■□□□□ 0.9
NFKB1-207ENST00000508584 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
NFKB1-207ENST00000508584 R3HDM1Q15032 1099 aaKnown RBP20.65■□□□□ 0.9
NFKB1-207ENST00000508584 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
NFKB1-207ENST00000508584 TSPYL6Q8N831 410 aa20.65■□□□□ 0.9
NFKB1-207ENST00000508584 CAMKK2Q96RR4 588 aa20.65■□□□□ 0.9
NFKB1-207ENST00000508584 TNS1Q9HBL0 1735 aaKnown RBP20.64■□□□□ 0.9
NFKB1-207ENST00000508584 ALDH1L2Q3SY69 923 aa20.64■□□□□ 0.89
NFKB1-207ENST00000508584 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.89
NFKB1-207ENST00000508584 LRP5O75197 1615 aa20.64■□□□□ 0.89
NFKB1-207ENST00000508584 KDM6AO15550 1401 aaPredicted RBP20.63■□□□□ 0.89
NFKB1-207ENST00000508584 SSH1Q8WYL5 1049 aa20.63■□□□□ 0.89
NFKB1-207ENST00000508584 DCAF5Q96JK2 942 aa20.63■□□□□ 0.89
NFKB1-207ENST00000508584 BCL2L13Q9BXK5 485 aa20.63■□□□□ 0.89
NFKB1-207ENST00000508584 SMC4Q9NTJ3 1288 aa20.63■□□□□ 0.89
NFKB1-207ENST00000508584 ELL2O00472 640 aaPredicted RBP20.62■□□□□ 0.89
NFKB1-207ENST00000508584 CANXP27824 592 aaKnown RBP20.62■□□□□ 0.89
NFKB1-207ENST00000508584 BTBD11A6QL63 1104 aa20.6■□□□□ 0.89
NFKB1-207ENST00000508584 KRT24Q2M2I5 525 aa20.6■□□□□ 0.89
NFKB1-207ENST00000508584 FRAT1Q92837 279 aaPredicted RBP20.6■□□□□ 0.89
NFKB1-207ENST00000508584 CDCA7Q9BWT1 371 aaPredicted RBP20.6■□□□□ 0.89
NFKB1-207ENST00000508584 NKX1-1Q15270 411 aaPredicted RBP20.58■□□□□ 0.89
NFKB1-207ENST00000508584 C20orf194Q5TEA3 1177 aa20.58■□□□□ 0.89
NFKB1-207ENST00000508584 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.89
NFKB1-207ENST00000508584 SLC52A2Q9HAB3 445 aa20.58■□□□□ 0.89
NFKB1-207ENST00000508584 SOS1Q07889 1333 aaPredicted RBP20.57■□□□□ 0.88
NFKB1-207ENST00000508584 MRC1P22897 1456 aa20.57■□□□□ 0.88
NFKB1-207ENST00000508584 DDB1Q16531 1140 aa20.57■□□□□ 0.88
NFKB1-207ENST00000508584 NBPF14Q5TI25 921 aa20.57■□□□□ 0.88
NFKB1-207ENST00000508584 KIF16BQ96L93 1317 aa20.56■□□□□ 0.88
NFKB1-207ENST00000508584 BRPF1P55201 1214 aaPredicted RBP20.56■□□□□ 0.88
NFKB1-207ENST00000508584 PDE3AQ14432 1141 aa20.56■□□□□ 0.88
NFKB1-207ENST00000508584 ZKSCAN2Q63HK3 967 aa20.56■□□□□ 0.88
NFKB1-207ENST00000508584 MRPL50Q8N5N7 158 aaKnown RBP20.56■□□□□ 0.88
NFKB1-207ENST00000508584 CRBNQ96SW2 442 aa20.56■□□□□ 0.88
NFKB1-207ENST00000508584 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
NFKB1-207ENST00000508584 EXOC6Q8TAG9 804 aa20.55■□□□□ 0.88
NFKB1-207ENST00000508584 PPP4R2Q9NY27 417 aa20.55■□□□□ 0.88
NFKB1-207ENST00000508584 SCN11AQ9UI33 1791 aa20.54■□□□□ 0.88
NFKB1-207ENST00000508584 SHANK3Q9BYB0 1731 aa20.54■□□□□ 0.88
NFKB1-207ENST00000508584 EXOC5O00471 708 aa20.54■□□□□ 0.88
NFKB1-207ENST00000508584 IPO8O15397 1037 aaKnown RBP20.54■□□□□ 0.88
NFKB1-207ENST00000508584 CABP4P57796 275 aa20.54■□□□□ 0.88
NFKB1-207ENST00000508584 NFATC2IPQ8NCF5 419 aa20.54■□□□□ 0.88
NFKB1-207ENST00000508584 NOB1Q9ULX3 412 aaKnown RBP20.54■□□□□ 0.88
NFKB1-207ENST00000508584 KDM3BQ7LBC6 1761 aa20.54■□□□□ 0.88
NFKB1-207ENST00000508584 ERVV-2B6SEH9 535 aa20.53■□□□□ 0.88
NFKB1-207ENST00000508584 TCERG1O14776 1098 aaKnown RBP20.53■□□□□ 0.88
NFKB1-207ENST00000508584 KCNQ3O43525 872 aa20.53■□□□□ 0.88
NFKB1-207ENST00000508584 MS4A1P11836 297 aa20.53■□□□□ 0.88
NFKB1-207ENST00000508584 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
NFKB1-207ENST00000508584 TNS2Q63HR2 1409 aa20.53■□□□□ 0.88
NFKB1-207ENST00000508584 SIPA1L3O60292 1781 aaPredicted RBP20.52■□□□□ 0.88
NFKB1-207ENST00000508584 HOXB7P09629 217 aa20.51■□□□□ 0.87
NFKB1-207ENST00000508584 ATF7IPQ6VMQ6 1270 aa20.5■□□□□ 0.87
NFKB1-207ENST00000508584 PANK1Q8TE04 598 aa20.5■□□□□ 0.87
NFKB1-207ENST00000508584 RREB1Q92766 1687 aa20.49■□□□□ 0.87
NFKB1-207ENST00000508584 VIRMAQ69YN4 1812 aaKnown RBP20.49■□□□□ 0.87
NFKB1-207ENST00000508584 CCDC30Q5VVM6 783 aa20.49■□□□□ 0.87
NFKB1-207ENST00000508584 ZNF790Q6PG37 636 aa20.49■□□□□ 0.87
NFKB1-207ENST00000508584 ARHGAP45Q92619 1136 aa20.49■□□□□ 0.87
NFKB1-207ENST00000508584 CHMP4AQ9BY43 222 aa20.49■□□□□ 0.87
NFKB1-207ENST00000508584 TNNQ9UQP3 1299 aa20.49■□□□□ 0.87
NFKB1-207ENST00000508584 PLSCR1O15162 318 aa20.48■□□□□ 0.87
NFKB1-207ENST00000508584 TRIM27P14373 513 aa20.48■□□□□ 0.87
NFKB1-207ENST00000508584 FTSJ3Q8IY81 847 aaKnown RBP20.48■□□□□ 0.87
NFKB1-207ENST00000508584 DZIP1LQ8IYY4 767 aaKnown RBP20.48■□□□□ 0.87
NFKB1-207ENST00000508584 BCL11BQ9C0K0 894 aaPredicted RBP20.48■□□□□ 0.87
NFKB1-207ENST00000508584 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
NFKB1-207ENST00000508584 RLBP1P12271 317 aa20.47■□□□□ 0.87
NFKB1-207ENST00000508584 SLC39A6Q13433 755 aa20.47■□□□□ 0.87
NFKB1-207ENST00000508584 TTC5Q8N0Z6 440 aa20.47■□□□□ 0.87
NFKB1-207ENST00000508584 MARCH10Q8NA82 808 aaPredicted RBP20.47■□□□□ 0.87
NFKB1-207ENST00000508584 CLUAP1Q96AJ1 413 aa20.47■□□□□ 0.87
NFKB1-207ENST00000508584 STK31Q9BXU1 1019 aa20.47■□□□□ 0.87
NFKB1-207ENST00000508584 HDGFL1Q5TGJ6 251 aa20.46■□□□□ 0.87
NFKB1-207ENST00000508584 COG6Q9Y2V7 657 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms