RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 TUBGCP6Q96RT7 1819 aa22.24■■□□□ 1.15
DDR1-263ENST00000508317 LY75O60449 1722 aa22.24■■□□□ 1.15
DDR1-263ENST00000508317 QSER1Q2KHR3 1735 aa22.24■■□□□ 1.15
DDR1-263ENST00000508317 MTHFSP49914 203 aa22.24■■□□□ 1.15
DDR1-263ENST00000508317 ASAP1Q9ULH1 1129 aa22.24■■□□□ 1.15
DDR1-263ENST00000508317 RTCBQ9Y3I0 505 aaKnown RBP22.23■■□□□ 1.15
DDR1-263ENST00000508317 ZEB1P37275 1124 aaPredicted RBP22.21■■□□□ 1.15
DDR1-263ENST00000508317 TRAPPC3LQ5T215 181 aa22.21■■□□□ 1.15
DDR1-263ENST00000508317 SULT6B1Q6IMI4 303 aa22.2■■□□□ 1.14
DDR1-263ENST00000508317 LINC00116Q8NCU8 138 aa22.2■■□□□ 1.14
DDR1-263ENST00000508317 ATG3Q9NT62 314 aa22.2■■□□□ 1.14
DDR1-263ENST00000508317 ADCY9O60503 1353 aa22.19■■□□□ 1.14
DDR1-263ENST00000508317 PKD1L3Q7Z443 1732 aa22.19■■□□□ 1.14
DDR1-263ENST00000508317 HSPA6P17066 643 aa22.18■■□□□ 1.14
DDR1-263ENST00000508317 C5P01031 1676 aa22.17■■□□□ 1.14
DDR1-263ENST00000508317 ADRA2BP18089 450 aa22.17■■□□□ 1.14
DDR1-263ENST00000508317 RFC4P35249 363 aa22.17■■□□□ 1.14
DDR1-263ENST00000508317 NLGN1Q8N2Q7 840 aa22.17■■□□□ 1.14
DDR1-263ENST00000508317 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
DDR1-263ENST00000508317 MAP2P11137 1827 aaKnown RBP22.15■■□□□ 1.14
DDR1-263ENST00000508317 ITPK1Q13572 414 aa22.15■■□□□ 1.14
DDR1-263ENST00000508317 RC3H1Q5TC82 1133 aaKnown RBP22.15■■□□□ 1.14
DDR1-263ENST00000508317 C4BP0C0L5 1744 aa22.14■■□□□ 1.13
DDR1-263ENST00000508317 PTCD1O75127 700 aaKnown RBP22.13■■□□□ 1.13
DDR1-263ENST00000508317 KIF7Q2M1P5 1343 aa22.12■■□□□ 1.13
DDR1-263ENST00000508317 MMP10P09238 476 aa22.12■■□□□ 1.13
DDR1-263ENST00000508317 AKAP4Q5JQC9 854 aa22.12■■□□□ 1.13
DDR1-263ENST00000508317 AEBP1Q8IUX7 1158 aa22.12■■□□□ 1.13
DDR1-263ENST00000508317 NFATC2IPQ8NCF5 419 aa22.12■■□□□ 1.13
DDR1-263ENST00000508317 IL13P35225 146 aa22.11■■□□□ 1.13
DDR1-263ENST00000508317 ZNF526Q8TF50 670 aaPredicted RBP22.11■■□□□ 1.13
DDR1-263ENST00000508317 GPBP1L1Q9HC44 474 aaPredicted RBP22.11■■□□□ 1.13
DDR1-263ENST00000508317 CCDC87Q9NVE4 849 aa22.11■■□□□ 1.13
DDR1-263ENST00000508317 PARP3Q9Y6F1 533 aa22.11■■□□□ 1.13
DDR1-263ENST00000508317 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
DDR1-263ENST00000508317 RPS6KA4O75676 772 aa22.1■■□□□ 1.13
DDR1-263ENST00000508317 AMER1Q5JTC6 1135 aaPredicted RBP22.1■■□□□ 1.13
DDR1-263ENST00000508317 CC2D1BQ5T0F9 858 aaKnown RBP22.1■■□□□ 1.13
DDR1-263ENST00000508317 CNTNAP4Q9C0A0 1308 aa22.09■■□□□ 1.13
DDR1-263ENST00000508317 SMIM5Q71RC9 77 aa22.09■■□□□ 1.13
DDR1-263ENST00000508317 TOGARAM1Q9Y4F4 1720 aa22.08■■□□□ 1.12
DDR1-263ENST00000508317 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
DDR1-263ENST00000508317 ARHGEF1Q92888 912 aaKnown RBP22.07■■□□□ 1.12
DDR1-263ENST00000508317 ITGB4P16144 1822 aa22.07■■□□□ 1.12
DDR1-263ENST00000508317 TGFB2P61812 414 aa22.06■■□□□ 1.12
DDR1-263ENST00000508317 AMIGO3Q86WK7 504 aa22.06■■□□□ 1.12
DDR1-263ENST00000508317 KDRP35968 1356 aa22.05■■□□□ 1.12
DDR1-263ENST00000508317 KIF3CO14782 793 aa22.05■■□□□ 1.12
DDR1-263ENST00000508317 HMOX1P09601 288 aa22.05■■□□□ 1.12
DDR1-263ENST00000508317 CFAP53Q96M91 514 aa22.05■■□□□ 1.12
DDR1-263ENST00000508317 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
DDR1-263ENST00000508317 ZPR1O75312 459 aa22.04■■□□□ 1.12
DDR1-263ENST00000508317 CRKLP46109 303 aaKnown RBP22.04■■□□□ 1.12
DDR1-263ENST00000508317 WWC3Q9ULE0 1092 aa22.04■■□□□ 1.12
DDR1-263ENST00000508317 TTC5Q8N0Z6 440 aa22.03■■□□□ 1.12
DDR1-263ENST00000508317 SLC52A2Q9HAB3 445 aa22.03■■□□□ 1.12
DDR1-263ENST00000508317 KDM6AO15550 1401 aaPredicted RBP22.03■■□□□ 1.12
DDR1-263ENST00000508317 TAF1LQ8IZX4 1826 aa22.01■■□□□ 1.11
DDR1-263ENST00000508317 NPM2Q86SE8 214 aaKnown RBP22.01■■□□□ 1.11
DDR1-263ENST00000508317 SLC4A9Q96Q91 983 aa22.01■■□□□ 1.11
DDR1-263ENST00000508317 BCS1LQ9Y276 419 aa22.01■■□□□ 1.11
DDR1-263ENST00000508317 GYS1P13807 737 aa22■■□□□ 1.11
DDR1-263ENST00000508317 DNAJC5GQ8N7S2 189 aa22■■□□□ 1.11
DDR1-263ENST00000508317 RNMTO43148 476 aaKnown RBP21.99■■□□□ 1.11
DDR1-263ENST00000508317 TEFQ10587 303 aa21.99■■□□□ 1.11
DDR1-263ENST00000508317 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
DDR1-263ENST00000508317 GAS2L2Q8NHY3 880 aa21.98■■□□□ 1.11
DDR1-263ENST00000508317 PER1O15534 1290 aaPredicted RBP21.97■■□□□ 1.11
DDR1-263ENST00000508317 FCHSD2O94868 740 aa21.97■■□□□ 1.11
DDR1-263ENST00000508317 UBR3Q6ZT12 1888 aa21.96■■□□□ 1.11
DDR1-263ENST00000508317 A0A0G2JLW4 131 aa21.96■■□□□ 1.11
DDR1-263ENST00000508317 STARD3NLO95772 234 aa21.96■■□□□ 1.11
DDR1-263ENST00000508317 ARHGAP27Q6ZUM4 889 aa21.96■■□□□ 1.11
DDR1-263ENST00000508317 LGR6Q9HBX8 967 aa21.96■■□□□ 1.11
DDR1-263ENST00000508317 NPC1L1Q9UHC9 1359 aa21.96■■□□□ 1.11
DDR1-263ENST00000508317 MTHFSDQ2M296 383 aaKnown RBP21.95■■□□□ 1.1
DDR1-263ENST00000508317 PIM2Q9P1W9 311 aa21.95■■□□□ 1.1
DDR1-263ENST00000508317 DNAJC10Q8IXB1 793 aa21.94■■□□□ 1.1
DDR1-263ENST00000508317 VSIG10Q8N0Z9 540 aa21.94■■□□□ 1.1
DDR1-263ENST00000508317 USP42Q9H9J4 1324 aaKnown RBP21.94■■□□□ 1.1
DDR1-263ENST00000508317 GNAT3A8MTJ3 354 aa21.93■■□□□ 1.1
DDR1-263ENST00000508317 TEX13AQ9BXU3 409 aaPredicted RBP21.93■■□□□ 1.1
DDR1-263ENST00000508317 A0A087WZG4 1122 aa21.92■■□□□ 1.1
DDR1-263ENST00000508317 NEFMP07197 916 aa21.92■■□□□ 1.1
DDR1-263ENST00000508317 DPEP1P16444 411 aa21.92■■□□□ 1.1
DDR1-263ENST00000508317 SLC39A6Q13433 755 aa21.92■■□□□ 1.1
DDR1-263ENST00000508317 DALRD3Q5D0E6 543 aaKnown RBP21.92■■□□□ 1.1
DDR1-263ENST00000508317 SRP68Q9UHB9 627 aaKnown RBP21.92■■□□□ 1.1
DDR1-263ENST00000508317 FKBP8Q14318 412 aa21.91■■□□□ 1.1
DDR1-263ENST00000508317 INTS5Q6P9B9 1019 aaKnown RBP21.91■■□□□ 1.1
DDR1-263ENST00000508317 ZNF831Q5JPB2 1677 aa21.91■■□□□ 1.1
DDR1-263ENST00000508317 CICQ96RK0 1608 aaPredicted RBP21.91■■□□□ 1.1
DDR1-263ENST00000508317 CYP19A1P11511 503 aaPredicted RBP21.9■■□□□ 1.1
DDR1-263ENST00000508317 APLP1P51693 650 aa21.9■■□□□ 1.1
DDR1-263ENST00000508317 COL13A1Q5TAT6 717 aaPredicted RBP21.9■■□□□ 1.1
DDR1-263ENST00000508317 RTF1Q92541 710 aaKnown RBP21.9■■□□□ 1.1
DDR1-263ENST00000508317 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.1
DDR1-263ENST00000508317 USPL1Q5W0Q7 1092 aa21.89■■□□□ 1.09
DDR1-263ENST00000508317 PXDNLA1KZ92 1463 aa21.89■■□□□ 1.09
DDR1-263ENST00000508317 PCNTO95613 3336 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms