RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 TLR1Q15399 786 aa10.46□□□□□ -0.73
DHFR-204ENST00000508282 NBPF10Q6P3W6 841 aaKnown RBP10.46□□□□□ -0.73
DHFR-204ENST00000508282 NBPF15Q8N660 670 aa10.46□□□□□ -0.73
DHFR-204ENST00000508282 SERTAD1Q9UHV2 236 aa10.46□□□□□ -0.73
DHFR-204ENST00000508282 ERBB4Q15303 1308 aa10.46□□□□□ -0.73
DHFR-204ENST00000508282 CFAP70Q5T0N1 1121 aa10.45□□□□□ -0.74
DHFR-204ENST00000508282 OGFOD1Q8N543 542 aa10.45□□□□□ -0.74
DHFR-204ENST00000508282 SLC4A9Q96Q91 983 aa10.45□□□□□ -0.74
DHFR-204ENST00000508282 LMOD1P29536 600 aaPredicted RBP10.44□□□□□ -0.74
DHFR-204ENST00000508282 ATP1A2P50993 1020 aa10.44□□□□□ -0.74
DHFR-204ENST00000508282 SMTNP53814 917 aa10.44□□□□□ -0.74
DHFR-204ENST00000508282 KANK4Q5T7N3 995 aaPredicted RBP10.44□□□□□ -0.74
DHFR-204ENST00000508282 TAS1R3Q7RTX0 852 aa10.44□□□□□ -0.74
DHFR-204ENST00000508282 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.44□□□□□ -0.74
DHFR-204ENST00000508282 DNAAF2Q9NVR5 837 aaKnown RBP10.44□□□□□ -0.74
DHFR-204ENST00000508282 ZNF358Q9NW07 568 aa10.44□□□□□ -0.74
DHFR-204ENST00000508282 ARID3CA6NKF2 412 aa10.43□□□□□ -0.74
DHFR-204ENST00000508282 WDR44Q5JSH3 913 aa10.43□□□□□ -0.74
DHFR-204ENST00000508282 PPARGC1BQ86YN6 1023 aaKnown RBP10.43□□□□□ -0.74
DHFR-204ENST00000508282 TPCN2Q8NHX9 752 aa10.43□□□□□ -0.74
DHFR-204ENST00000508282 IRF7Q92985 503 aa10.43□□□□□ -0.74
DHFR-204ENST00000508282 DKK1O94907 266 aa10.42□□□□□ -0.74
DHFR-204ENST00000508282 VSIG8P0DPA2 414 aa10.42□□□□□ -0.74
DHFR-204ENST00000508282 ITGA6P23229 1130 aa10.42□□□□□ -0.74
DHFR-204ENST00000508282 CCDC102BQ68D86 513 aa10.42□□□□□ -0.74
DHFR-204ENST00000508282 TMEM214Q6NUQ4 689 aaKnown RBP10.42□□□□□ -0.74
DHFR-204ENST00000508282 LARGE2Q8N3Y3 721 aa10.42□□□□□ -0.74
DHFR-204ENST00000508282 RASA1P20936 1047 aa10.41□□□□□ -0.74
DHFR-204ENST00000508282 PHKA2P46019 1235 aa10.41□□□□□ -0.74
DHFR-204ENST00000508282 MTFR1Q15390 333 aa10.41□□□□□ -0.74
DHFR-204ENST00000508282 C4orf17Q53FE4 359 aa10.41□□□□□ -0.74
DHFR-204ENST00000508282 GNASQ5JWF2 1037 aa10.41□□□□□ -0.74
DHFR-204ENST00000508282 SIX5Q8N196 739 aa10.41□□□□□ -0.74
DHFR-204ENST00000508282 ZNF594Q96JF6 807 aaPredicted RBP10.41□□□□□ -0.74
DHFR-204ENST00000508282 TIMMDC1Q9NPL8 285 aa10.41□□□□□ -0.74
DHFR-204ENST00000508282 CUEDC1Q9NWM3 386 aaPredicted RBP10.41□□□□□ -0.74
DHFR-204ENST00000508282 DYRK1BQ9Y463 629 aa10.41□□□□□ -0.74
DHFR-204ENST00000508282 USP3Q9Y6I4 520 aa10.41□□□□□ -0.74
DHFR-204ENST00000508282 A6NJY4 79 aa10.4□□□□□ -0.74
DHFR-204ENST00000508282 RHBDD1Q8TEB9 315 aa10.4□□□□□ -0.74
DHFR-204ENST00000508282 NANOS1Q8WY41 292 aaKnown RBP10.4□□□□□ -0.74
DHFR-204ENST00000508282 IQSEC3Q9UPP2 1182 aaPredicted RBP10.4□□□□□ -0.74
DHFR-204ENST00000508282 BACH1O14867 736 aa10.39□□□□□ -0.75
DHFR-204ENST00000508282 GTF2E1P29083 439 aaPredicted RBP10.39□□□□□ -0.75
DHFR-204ENST00000508282 GMPRP36959 345 aa10.39□□□□□ -0.75
DHFR-204ENST00000508282 CRTC2Q53ET0 693 aaPredicted RBP10.39□□□□□ -0.75
DHFR-204ENST00000508282 ZNF295-AS1Q8N0V1 137 aa10.39□□□□□ -0.75
DHFR-204ENST00000508282 CDK2AP1O14519 115 aa10.38□□□□□ -0.75
DHFR-204ENST00000508282 EPHA4P54764 986 aa10.38□□□□□ -0.75
DHFR-204ENST00000508282 VRTNQ9H8Y1 702 aa10.38□□□□□ -0.75
DHFR-204ENST00000508282 RFX1P22670 979 aa10.37□□□□□ -0.75
DHFR-204ENST00000508282 PTK7Q13308 1070 aa10.37□□□□□ -0.75
DHFR-204ENST00000508282 LARP1Q6PKG0 1096 aaKnown RBP10.37□□□□□ -0.75
DHFR-204ENST00000508282 TNS4Q8IZW8 715 aa10.37□□□□□ -0.75
DHFR-204ENST00000508282 VWA5B2Q8N398 1253 aa10.37□□□□□ -0.75
DHFR-204ENST00000508282 GPR161Q8N6U8 529 aaKnown RBP10.37□□□□□ -0.75
DHFR-204ENST00000508282 GAS2L1Q99501 681 aaPredicted RBP10.37□□□□□ -0.75
DHFR-204ENST00000508282 SCHIP1Q9P0W5 487 aaPredicted RBP10.37□□□□□ -0.75
DHFR-204ENST00000508282 SFI1A8K8P3 1242 aa10.36□□□□□ -0.75
DHFR-204ENST00000508282 WIPF1O43516 503 aa10.36□□□□□ -0.75
DHFR-204ENST00000508282 FOXK2Q01167 660 aa10.36□□□□□ -0.75
DHFR-204ENST00000508282 A0A1B0GTH6 734 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 CDC14CA4D256 554 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 FAM196BA6NMK8 535 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L10C9JJH3 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L12C9JPN9 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L21D6R901 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 F11P03951 625 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 PLA2G4AP47712 749 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 DBN1Q16643 649 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 RIPOR1Q6ZS17 1223 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 NIFKQ9BYG3 293 aaKnown RBP10.35□□□□□ -0.75
DHFR-204ENST00000508282 C1orf115Q9H7X2 142 aa10.35□□□□□ -0.75
DHFR-204ENST00000508282 M0R2N6 131 aa10.34□□□□□ -0.75
DHFR-204ENST00000508282 CDCA8Q53HL2 280 aa10.34□□□□□ -0.75
DHFR-204ENST00000508282 SV2AQ7L0J3 742 aa10.34□□□□□ -0.75
DHFR-204ENST00000508282 TRIM22Q8IYM9 498 aa10.34□□□□□ -0.75
DHFR-204ENST00000508282 TSEN2Q8NCE0 465 aaKnown RBP10.34□□□□□ -0.75
DHFR-204ENST00000508282 MSX1P28360 303 aa10.33□□□□□ -0.76
DHFR-204ENST00000508282 SRPK2P78362 688 aaKnown RBP10.33□□□□□ -0.76
DHFR-204ENST00000508282 SLC9A9Q8IVB4 645 aa10.33□□□□□ -0.76
DHFR-204ENST00000508282 ZNF837Q96EG3 531 aaPredicted RBP10.33□□□□□ -0.76
DHFR-204ENST00000508282 GPAMQ9HCL2 828 aa10.33□□□□□ -0.76
DHFR-204ENST00000508282 SERPINA10Q9UK55 444 aa10.33□□□□□ -0.76
DHFR-204ENST00000508282 SEC13P55735 322 aa10.32□□□□□ -0.76
DHFR-204ENST00000508282 DPYDQ12882 1025 aa10.32□□□□□ -0.76
DHFR-204ENST00000508282 TBCELQ5QJ74 424 aa10.32□□□□□ -0.76
DHFR-204ENST00000508282 ANKMY2Q8IV38 441 aa10.32□□□□□ -0.76
DHFR-204ENST00000508282 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
DHFR-204ENST00000508282 ARXQ96QS3 562 aa10.32□□□□□ -0.76
DHFR-204ENST00000508282 CABP1Q9NZU7 370 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms