RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 ARHGEF6Q15052 776 aa9.45□□□□□ -0.9
PDE6A-202ENST00000508173 TMEM132EQ6IEE7 984 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 POLR3DP05423 398 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-202ENST00000508173 USP5P45974 858 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 SASS6Q6UVJ0 657 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 LUC7LQ9NQ29 371 aaKnown RBP9.44□□□□□ -0.9
PDE6A-202ENST00000508173 LRP2BPQ9P2M1 347 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 A0A087WZG4 1122 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 KCNA6P17658 529 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 STIM1Q13586 685 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 INTS3Q68E01 1043 aaKnown RBP9.44□□□□□ -0.9
PDE6A-202ENST00000508173 CCDC150Q8NCX0 1101 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 PARP3Q9Y6F1 533 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 KDM6BO15054 1643 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 BRD4O60885 1362 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-202ENST00000508173 KDM4AO75164 1064 aa9.44□□□□□ -0.9
PDE6A-202ENST00000508173 FBXO31Q5XUX0 539 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-202ENST00000508173 SEPT7Q16181 437 aaKnown RBP9.43□□□□□ -0.9
PDE6A-202ENST00000508173 AEBP1Q8IUX7 1158 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 MNS1Q8NEH6 495 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 CCDC66A2RUB6 948 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 NOL7Q9UMY1 257 aaKnown RBP9.43□□□□□ -0.9
PDE6A-202ENST00000508173 KDM5BQ9UGL1 1544 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 ATP2B1P20020 1258 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 RFC4P35249 363 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 FILIP1LQ4L180 1135 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 TRERF1Q96PN7 1200 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 ATAD2Q6PL18 1390 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 RPRD2Q5VT52 1461 aaKnown RBP9.43□□□□□ -0.9
PDE6A-202ENST00000508173 DCTN1Q14203 1278 aa9.43□□□□□ -0.9
PDE6A-202ENST00000508173 NAT10Q9H0A0 1025 aaKnown RBP9.43□□□□□ -0.9
PDE6A-202ENST00000508173 ANKRD62A6NC57 917 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 CDC45O75419 566 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 ERLIN2O94905 339 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 TDO2P48775 406 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 TXLNBQ8N3L3 684 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 CAGE1Q8TC20 777 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 KIAA1107Q9UPP5 1409 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 EZRP15311 586 aaKnown RBP9.42□□□□□ -0.9
PDE6A-202ENST00000508173 DHX37Q8IY37 1157 aaKnown RBP9.42□□□□□ -0.9
PDE6A-202ENST00000508173 FLAD1Q8NFF5 587 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 ACBD3Q9H3P7 528 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
PDE6A-202ENST00000508173 C6orf229H3BNL8 230 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 CABP5Q9NP86 173 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 DZIP1Q86YF9 867 aaKnown RBP9.42□□□□□ -0.9
PDE6A-202ENST00000508173 SMARCE1Q969G3 411 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
PDE6A-202ENST00000508173 NOM1Q5C9Z4 860 aaKnown RBP9.42□□□□□ -0.9
PDE6A-202ENST00000508173 FERMT2Q96AC1 680 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 TRIM5Q9C035 493 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 SSBP05455 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
PDE6A-202ENST00000508173 MYL6BP14649 208 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 DPY19L2Q6NUT2 758 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 SYCE3A1L190 88 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 PPP1R12BO60237 982 aaPredicted RBP9.41□□□□□ -0.9
PDE6A-202ENST00000508173 TTLL5Q6EMB2 1281 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 PANK2Q9BZ23 570 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 TANGO6Q9C0B7 1094 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 YEATS2Q9ULM3 1422 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 DUOX2Q9NRD8 1548 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 HSP90AB3PQ58FF7 597 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 STK11IPQ8N1F8 1099 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 JDP2Q8WYK2 163 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 CDK19Q9BWU1 502 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 GGNBP2Q9H3C7 697 aa9.41□□□□□ -0.9
PDE6A-202ENST00000508173 B4DLN1 442 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 K7ELQ4 463 aaPredicted RBP9.4□□□□□ -0.9
PDE6A-202ENST00000508173 MRPL12P52815 198 aaKnown RBP9.4□□□□□ -0.9
PDE6A-202ENST00000508173 CCDC181Q5TID7 509 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 NUP133Q8WUM0 1156 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 NUP153P49790 1475 aaKnown RBP9.4□□□□□ -0.9
PDE6A-202ENST00000508173 LPXNO60711 386 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 ZSCAN30Q86W11 494 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 ARGLU1Q9NWB6 273 aaPredicted RBP9.4□□□□□ -0.9
PDE6A-202ENST00000508173 CETN2P41208 172 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 ANAPC15P60006 121 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 CGNQ9P2M7 1197 aaKnown RBP9.4□□□□□ -0.9
PDE6A-202ENST00000508173 COMMD10Q9Y6G5 202 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 ZMYM3Q14202 1370 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 PTPN23Q9H3S7 1636 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
PDE6A-202ENST00000508173 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.91
PDE6A-202ENST00000508173 PDILTQ8N807 584 aa9.4□□□□□ -0.91
PDE6A-202ENST00000508173 ZNHIT6Q9NWK9 470 aaKnown RBP9.4□□□□□ -0.91
PDE6A-202ENST00000508173 ZBTB24O43167 697 aaPredicted RBP9.39□□□□□ -0.91
PDE6A-202ENST00000508173 FIBPO43427 364 aa9.39□□□□□ -0.91
PDE6A-202ENST00000508173 EPB41L2O43491 1005 aaKnown RBP9.39□□□□□ -0.91
PDE6A-202ENST00000508173 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
PDE6A-202ENST00000508173 CCDC96Q2M329 555 aa9.39□□□□□ -0.91
PDE6A-202ENST00000508173 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
PDE6A-202ENST00000508173 PDCL2Q8N4E4 241 aa9.39□□□□□ -0.91
PDE6A-202ENST00000508173 SEPT11Q9NVA2 429 aaKnown RBP9.39□□□□□ -0.91
PDE6A-202ENST00000508173 NOB1Q9ULX3 412 aaKnown RBP9.39□□□□□ -0.91
PDE6A-202ENST00000508173 SSX2IPQ9Y2D8 614 aa9.39□□□□□ -0.91
PDE6A-202ENST00000508173 CCDC61Q9Y6R9 512 aa9.39□□□□□ -0.91
PDE6A-202ENST00000508173 RBM6P78332 1123 aaKnown RBP9.39□□□□□ -0.91
PDE6A-202ENST00000508173 HDGFL1Q5TGJ6 251 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms