RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 CCDC27Q2M243 656 aa11.59□□□□□ -0.55
COL6A4P1-204ENST00000508169 SLC4A9Q96Q91 983 aa11.59□□□□□ -0.55
COL6A4P1-204ENST00000508169 TNFRSF10AO00220 468 aa11.58□□□□□ -0.56
COL6A4P1-204ENST00000508169 ZIC2O95409 532 aaPredicted RBP11.58□□□□□ -0.56
COL6A4P1-204ENST00000508169 CBLBQ13191 982 aa11.58□□□□□ -0.56
COL6A4P1-204ENST00000508169 FKBP5Q13451 457 aaPredicted RBP11.58□□□□□ -0.56
COL6A4P1-204ENST00000508169 SCG3Q8WXD2 468 aaKnown RBP11.58□□□□□ -0.56
COL6A4P1-204ENST00000508169 ITPKCQ96DU7 683 aa11.58□□□□□ -0.56
COL6A4P1-204ENST00000508169 MKNK1Q9BUB5 465 aa11.58□□□□□ -0.56
COL6A4P1-204ENST00000508169 WDR4P57081 412 aaKnown RBP11.57□□□□□ -0.56
COL6A4P1-204ENST00000508169 KLF16Q9BXK1 252 aaPredicted RBP11.57□□□□□ -0.56
COL6A4P1-204ENST00000508169 TSPAN10Q9H1Z9 355 aaPredicted RBP11.57□□□□□ -0.56
COL6A4P1-204ENST00000508169 TOR4AQ9NXH8 423 aa11.57□□□□□ -0.56
COL6A4P1-204ENST00000508169 SOWAHDA6NJG2 315 aa11.56□□□□□ -0.56
COL6A4P1-204ENST00000508169 FOXO3O43524 673 aa11.56□□□□□ -0.56
COL6A4P1-204ENST00000508169 IL2RAP01589 272 aa11.56□□□□□ -0.56
COL6A4P1-204ENST00000508169 Q6ZVU0 165 aa11.56□□□□□ -0.56
COL6A4P1-204ENST00000508169 XAGE2Q96GT9 111 aa11.56□□□□□ -0.56
COL6A4P1-204ENST00000508169 PURBQ96QR8 312 aaKnown RBP11.56□□□□□ -0.56
COL6A4P1-204ENST00000508169 ZFAND3Q9H8U3 227 aa11.56□□□□□ -0.56
COL6A4P1-204ENST00000508169 ATAD2Q6PL18 1390 aa11.55□□□□□ -0.56
COL6A4P1-204ENST00000508169 A6NJY4 79 aa11.55□□□□□ -0.56
COL6A4P1-204ENST00000508169 PTCD1O75127 700 aaKnown RBP11.55□□□□□ -0.56
COL6A4P1-204ENST00000508169 SMTNP53814 917 aa11.55□□□□□ -0.56
COL6A4P1-204ENST00000508169 GAS2L2Q8NHY3 880 aa11.55□□□□□ -0.56
COL6A4P1-204ENST00000508169 A0A1W2PRU2 124 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 ABL1P00519 1130 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 TIMP2P16035 220 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 SMPD1P17405 629 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 PRR20EP86478 221 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 PRR20CP86479 221 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 PRR20DP86480 221 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 PRR20BP86481 221 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 PRR20AP86496 221 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 FOXK2Q01167 660 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 MTFR1Q15390 333 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 TLR1Q15399 786 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 KDF1Q8NAX2 398 aaPredicted RBP11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 RGS22Q8NE09 1264 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 COL26A1Q96A83 441 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 ESYT1Q9BSJ8 1104 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 SCHIP1Q9P0W5 487 aaPredicted RBP11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 EGFL7Q9UHF1 273 aa11.54□□□□□ -0.56
COL6A4P1-204ENST00000508169 C21orf2O43822 256 aa11.53□□□□□ -0.56
COL6A4P1-204ENST00000508169 PTGIRP43119 386 aa11.53□□□□□ -0.56
COL6A4P1-204ENST00000508169 CLN3Q13286 438 aa11.53□□□□□ -0.56
COL6A4P1-204ENST00000508169 SLC9A9Q8IVB4 645 aa11.53□□□□□ -0.56
COL6A4P1-204ENST00000508169 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
COL6A4P1-204ENST00000508169 SEPT3Q9UH03 358 aa11.53□□□□□ -0.56
COL6A4P1-204ENST00000508169 PPP1R12BO60237 982 aaPredicted RBP11.52□□□□□ -0.57
COL6A4P1-204ENST00000508169 TRIM67Q6ZTA4 783 aa11.52□□□□□ -0.57
COL6A4P1-204ENST00000508169 VTI1AQ96AJ9 217 aa11.52□□□□□ -0.57
COL6A4P1-204ENST00000508169 AGBL1Q96MI9 1066 aa11.52□□□□□ -0.57
COL6A4P1-204ENST00000508169 ZNF211Q13398 564 aaPredicted RBP11.51□□□□□ -0.57
COL6A4P1-204ENST00000508169 TBCELQ5QJ74 424 aa11.51□□□□□ -0.57
COL6A4P1-204ENST00000508169 CAPN12Q6ZSI9 719 aa11.51□□□□□ -0.57
COL6A4P1-204ENST00000508169 GTF3C2Q8WUA4 911 aaPredicted RBP11.51□□□□□ -0.57
COL6A4P1-204ENST00000508169 HRH3Q9Y5N1 445 aa11.51□□□□□ -0.57
COL6A4P1-204ENST00000508169 MEN1O00255 615 aa11.5□□□□□ -0.57
COL6A4P1-204ENST00000508169 RELBQ01201 579 aa11.5□□□□□ -0.57
COL6A4P1-204ENST00000508169 NLRP3Q96P20 1036 aa11.5□□□□□ -0.57
COL6A4P1-204ENST00000508169 BIN2Q9UBW5 565 aaPredicted RBP11.5□□□□□ -0.57
COL6A4P1-204ENST00000508169 H3BRB1 525 aa11.49□□□□□ -0.57
COL6A4P1-204ENST00000508169 CDK2AP1O14519 115 aa11.49□□□□□ -0.57
COL6A4P1-204ENST00000508169 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
COL6A4P1-204ENST00000508169 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
COL6A4P1-204ENST00000508169 TUT1Q9H6E5 874 aaKnown RBP11.49□□□□□ -0.57
COL6A4P1-204ENST00000508169 ANO2Q9NQ90 1003 aa11.49□□□□□ -0.57
COL6A4P1-204ENST00000508169 PSMA6P60900 246 aaKnown RBP11.48□□□□□ -0.57
COL6A4P1-204ENST00000508169 NAA30Q147X3 362 aaPredicted RBP11.48□□□□□ -0.57
COL6A4P1-204ENST00000508169 MEIOBQ8N635 442 aa11.48□□□□□ -0.57
COL6A4P1-204ENST00000508169 HPS1Q92902 700 aa11.48□□□□□ -0.57
COL6A4P1-204ENST00000508169 IQSEC3Q9UPP2 1182 aaPredicted RBP11.48□□□□□ -0.57
COL6A4P1-204ENST00000508169 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
COL6A4P1-204ENST00000508169 USP3Q9Y6I4 520 aa11.48□□□□□ -0.57
COL6A4P1-204ENST00000508169 DNMT3AQ9Y6K1 912 aaPredicted RBP11.48□□□□□ -0.57
COL6A4P1-204ENST00000508169 ICMTO60725 284 aa11.47□□□□□ -0.57
COL6A4P1-204ENST00000508169 CENPCQ03188 943 aa11.47□□□□□ -0.57
COL6A4P1-204ENST00000508169 NPM2Q86SE8 214 aaKnown RBP11.47□□□□□ -0.57
COL6A4P1-204ENST00000508169 GLYCTKQ8IVS8 523 aa11.47□□□□□ -0.57
COL6A4P1-204ENST00000508169 C2orf49Q9BVC5 232 aaPredicted RBP11.47□□□□□ -0.57
COL6A4P1-204ENST00000508169 FHDC1Q9C0D6 1143 aaPredicted RBP11.47□□□□□ -0.57
COL6A4P1-204ENST00000508169 ZNF395Q9H8N7 513 aaPredicted RBP11.47□□□□□ -0.57
COL6A4P1-204ENST00000508169 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL6A4P1-204ENST00000508169 SF3B2Q13435 895 aaKnown RBP11.46□□□□□ -0.57
COL6A4P1-204ENST00000508169 HELQQ8TDG4 1101 aa11.45□□□□□ -0.58
COL6A4P1-204ENST00000508169 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
COL6A4P1-204ENST00000508169 FOXD4L5Q5VV16 416 aaPredicted RBP11.44□□□□□ -0.58
COL6A4P1-204ENST00000508169 FOXD4L4Q8WXT5 416 aaPredicted RBP11.44□□□□□ -0.58
COL6A4P1-204ENST00000508169 ZSCAN10Q96SZ4 725 aaPredicted RBP11.44□□□□□ -0.58
COL6A4P1-204ENST00000508169 TSEN34Q9BSV6 310 aaKnown RBP11.44□□□□□ -0.58
COL6A4P1-204ENST00000508169 MTMR3Q13615 1198 aa11.43□□□□□ -0.58
COL6A4P1-204ENST00000508169 C16orf46Q6P387 395 aa11.43□□□□□ -0.58
COL6A4P1-204ENST00000508169 CABP1Q9NZU7 370 aa11.43□□□□□ -0.58
COL6A4P1-204ENST00000508169 SERTM1A2A2V5 107 aa11.42□□□□□ -0.58
COL6A4P1-204ENST00000508169 CAPN5O15484 640 aaPredicted RBP11.42□□□□□ -0.58
COL6A4P1-204ENST00000508169 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
COL6A4P1-204ENST00000508169 TEAD4Q15561 434 aa11.42□□□□□ -0.58
COL6A4P1-204ENST00000508169 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms