RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 MYOM3Q5VTT5 1437 aa11.47□□□□□ -0.57
CDH6-204ENST00000508132 C11orf95C9JLR9 678 aaPredicted RBP11.47□□□□□ -0.57
CDH6-204ENST00000508132 SMCPP49901 116 aaPredicted RBP11.47□□□□□ -0.57
CDH6-204ENST00000508132 SKOR1P84550 965 aa11.47□□□□□ -0.57
CDH6-204ENST00000508132 CCDC24Q8N4L8 307 aa11.47□□□□□ -0.57
CDH6-204ENST00000508132 CTC1Q2NKJ3 1217 aa11.46□□□□□ -0.57
CDH6-204ENST00000508132 SNIP1Q8TAD8 396 aaKnown RBP11.46□□□□□ -0.57
CDH6-204ENST00000508132 BCL9LQ86UU0 1499 aa11.45□□□□□ -0.58
CDH6-204ENST00000508132 ITGAEP38570 1179 aa11.45□□□□□ -0.58
CDH6-204ENST00000508132 DEFB132Q7Z7B7 95 aa11.45□□□□□ -0.58
CDH6-204ENST00000508132 LCE2CQ5TA81 110 aa11.44□□□□□ -0.58
CDH6-204ENST00000508132 BRINP3Q76B58 766 aa11.44□□□□□ -0.58
CDH6-204ENST00000508132 HPS1Q92902 700 aa11.44□□□□□ -0.58
CDH6-204ENST00000508132 EID1Q9Y6B2 187 aa11.44□□□□□ -0.58
CDH6-204ENST00000508132 BRWD3Q6RI45 1802 aa11.44□□□□□ -0.58
CDH6-204ENST00000508132 SETD5Q9C0A6 1442 aa11.43□□□□□ -0.58
CDH6-204ENST00000508132 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
CDH6-204ENST00000508132 SNRPBP14678 240 aaKnown RBP11.43□□□□□ -0.58
CDH6-204ENST00000508132 YY1P25490 414 aa11.43□□□□□ -0.58
CDH6-204ENST00000508132 MINK1Q8N4C8 1332 aaPredicted RBP11.42□□□□□ -0.58
CDH6-204ENST00000508132 EFCAB6Q5THR3 1501 aa11.42□□□□□ -0.58
CDH6-204ENST00000508132 ASXL1Q8IXJ9 1541 aa11.42□□□□□ -0.58
CDH6-204ENST00000508132 REPIN1Q9BWE0 567 aaKnown RBP11.42□□□□□ -0.58
CDH6-204ENST00000508132 ATP13A2Q9NQ11 1180 aa11.42□□□□□ -0.58
CDH6-204ENST00000508132 PNPLA6Q8IY17 1366 aa11.41□□□□□ -0.58
CDH6-204ENST00000508132 HRCP23327 699 aa11.41□□□□□ -0.58
CDH6-204ENST00000508132 DDX17Q92841 729 aaKnown RBP11.41□□□□□ -0.58
CDH6-204ENST00000508132 NGLY1Q96IV0 654 aa11.41□□□□□ -0.58
CDH6-204ENST00000508132 FAM217BQ9NTX9 383 aaPredicted RBP11.41□□□□□ -0.58
CDH6-204ENST00000508132 ATRNO75882 1429 aa11.41□□□□□ -0.58
CDH6-204ENST00000508132 MYO5BQ9ULV0 1848 aa11.4□□□□□ -0.58
CDH6-204ENST00000508132 CCDC141Q6ZP82 1450 aa11.4□□□□□ -0.58
CDH6-204ENST00000508132 PTPN23Q9H3S7 1636 aa11.4□□□□□ -0.58
CDH6-204ENST00000508132 ADAMTS2O95450 1211 aa11.4□□□□□ -0.58
CDH6-204ENST00000508132 USP46P62068 366 aa11.4□□□□□ -0.58
CDH6-204ENST00000508132 NFX1Q12986 1120 aaKnown RBP11.4□□□□□ -0.58
CDH6-204ENST00000508132 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
CDH6-204ENST00000508132 WFS1O76024 890 aa11.39□□□□□ -0.59
CDH6-204ENST00000508132 PTCRAQ6ISU1 281 aaPredicted RBP11.39□□□□□ -0.59
CDH6-204ENST00000508132 CCDC125Q86Z20 511 aa11.39□□□□□ -0.59
CDH6-204ENST00000508132 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
CDH6-204ENST00000508132 JUNDP17535 347 aa11.38□□□□□ -0.59
CDH6-204ENST00000508132 PCDHGC3Q9UN70 934 aa11.38□□□□□ -0.59
CDH6-204ENST00000508132 EIF2AK4Q9P2K8 1649 aaKnown RBP11.38□□□□□ -0.59
CDH6-204ENST00000508132 BLMP54132 1417 aaPredicted RBP11.37□□□□□ -0.59
CDH6-204ENST00000508132 UTRNP46939 3433 aa11.37□□□□□ -0.59
CDH6-204ENST00000508132 USP21Q9UK80 565 aa11.36□□□□□ -0.59
CDH6-204ENST00000508132 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
CDH6-204ENST00000508132 ADGRB3O60242 1522 aa11.35□□□□□ -0.59
CDH6-204ENST00000508132 ARHGAP31Q2M1Z3 1444 aa11.35□□□□□ -0.59
CDH6-204ENST00000508132 GLI3P10071 1580 aa11.34□□□□□ -0.59
CDH6-204ENST00000508132 CLCN1P35523 988 aa11.34□□□□□ -0.59
CDH6-204ENST00000508132 C14orf37Q86TY3 774 aa11.34□□□□□ -0.59
CDH6-204ENST00000508132 TRPC5Q9UL62 973 aaPredicted RBP11.34□□□□□ -0.59
CDH6-204ENST00000508132 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
CDH6-204ENST00000508132 WNT7BP56706 349 aa11.33□□□□□ -0.6
CDH6-204ENST00000508132 IDI1Q13907 227 aa11.33□□□□□ -0.6
CDH6-204ENST00000508132 TRIM47Q96LD4 638 aa11.33□□□□□ -0.6
CDH6-204ENST00000508132 NUDT12Q9BQG2 462 aa11.33□□□□□ -0.6
CDH6-204ENST00000508132 C19orf44Q9H6X5 657 aa11.33□□□□□ -0.6
CDH6-204ENST00000508132 MST1RQ04912 1400 aa11.33□□□□□ -0.6
CDH6-204ENST00000508132 MARF1Q9Y4F3 1742 aaKnown RBP11.32□□□□□ -0.6
CDH6-204ENST00000508132 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
CDH6-204ENST00000508132 ATF3P18847 181 aa11.32□□□□□ -0.6
CDH6-204ENST00000508132 FNBP4Q8N3X1 1017 aaPredicted RBP11.32□□□□□ -0.6
CDH6-204ENST00000508132 CAMTA1Q9Y6Y1 1673 aa11.32□□□□□ -0.6
CDH6-204ENST00000508132 ZFYVE9O95405 1425 aa11.32□□□□□ -0.6
CDH6-204ENST00000508132 UNC13BO14795 1591 aa11.32□□□□□ -0.6
CDH6-204ENST00000508132 ARHGEF5Q12774 1597 aa11.32□□□□□ -0.6
CDH6-204ENST00000508132 SENP3-EIF4A1A0A087X0R7 540 aa11.31□□□□□ -0.6
CDH6-204ENST00000508132 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
CDH6-204ENST00000508132 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
CDH6-204ENST00000508132 LRRC59Q96AG4 307 aaKnown RBP11.31□□□□□ -0.6
CDH6-204ENST00000508132 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
CDH6-204ENST00000508132 SPHKAPQ2M3C7 1700 aa11.3□□□□□ -0.6
CDH6-204ENST00000508132 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
CDH6-204ENST00000508132 SIAH2O43255 324 aa11.3□□□□□ -0.6
CDH6-204ENST00000508132 FDX1P10109 184 aa11.3□□□□□ -0.6
CDH6-204ENST00000508132 NDUFV2P19404 249 aa11.3□□□□□ -0.6
CDH6-204ENST00000508132 BCANQ96GW7 911 aa11.3□□□□□ -0.6
CDH6-204ENST00000508132 PLEKHG1Q9ULL1 1385 aa11.29□□□□□ -0.6
CDH6-204ENST00000508132 ABCC5O15440 1437 aa11.29□□□□□ -0.6
CDH6-204ENST00000508132 DAPK1P53355 1430 aa11.29□□□□□ -0.6
CDH6-204ENST00000508132 ADAMTS13Q76LX8 1427 aa11.29□□□□□ -0.6
CDH6-204ENST00000508132 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
CDH6-204ENST00000508132 LAMC1P11047 1609 aa11.29□□□□□ -0.6
CDH6-204ENST00000508132 BMP1P13497 986 aa11.29□□□□□ -0.6
CDH6-204ENST00000508132 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
CDH6-204ENST00000508132 GCC2Q8IWJ2 1684 aa11.29□□□□□ -0.6
CDH6-204ENST00000508132 RAB3GAP2Q9H2M9 1393 aa11.28□□□□□ -0.6
CDH6-204ENST00000508132 COL22A1Q8NFW1 1626 aaPredicted RBP11.28□□□□□ -0.6
CDH6-204ENST00000508132 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
CDH6-204ENST00000508132 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDH6-204ENST00000508132 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
CDH6-204ENST00000508132 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.28□□□□□ -0.6
CDH6-204ENST00000508132 SH3BP2P78314 561 aa11.27□□□□□ -0.61
CDH6-204ENST00000508132 R3HDM1Q15032 1099 aaKnown RBP11.27□□□□□ -0.61
CDH6-204ENST00000508132 SPIRE2Q8WWL2 714 aa11.27□□□□□ -0.61
CDH6-204ENST00000508132 RRP7BPQ9NSQ0 103 aa11.27□□□□□ -0.61
CDH6-204ENST00000508132 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms