RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 SSFA2P28290 1259 aa12.94□□□□□ -0.34
CAST-220ENST00000508117 ITGB4P16144 1822 aa12.94□□□□□ -0.34
CAST-220ENST00000508117 MAP2P11137 1827 aaKnown RBP12.93□□□□□ -0.34
CAST-220ENST00000508117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.93□□□□□ -0.34
CAST-220ENST00000508117 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
CAST-220ENST00000508117 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
CAST-220ENST00000508117 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
CAST-220ENST00000508117 WDR90Q96KV7 1748 aa12.93□□□□□ -0.34
CAST-220ENST00000508117 MPRIPQ6WCQ1 1025 aa12.92□□□□□ -0.34
CAST-220ENST00000508117 CARD11Q9BXL7 1154 aa12.92□□□□□ -0.34
CAST-220ENST00000508117 KIAA1551Q9HCM1 1747 aa12.91□□□□□ -0.34
CAST-220ENST00000508117 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
CAST-220ENST00000508117 TGFB2P61812 414 aa12.91□□□□□ -0.34
CAST-220ENST00000508117 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
CAST-220ENST00000508117 SIN3AQ96ST3 1273 aa12.91□□□□□ -0.34
CAST-220ENST00000508117 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
CAST-220ENST00000508117 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
CAST-220ENST00000508117 PKD1L3Q7Z443 1732 aa12.91□□□□□ -0.34
CAST-220ENST00000508117 CYP27B1O15528 508 aa12.9□□□□□ -0.34
CAST-220ENST00000508117 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
CAST-220ENST00000508117 RBM46Q8TBY0 533 aaKnown RBP12.9□□□□□ -0.34
CAST-220ENST00000508117 INSRP06213 1382 aa12.9□□□□□ -0.34
CAST-220ENST00000508117 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
CAST-220ENST00000508117 PHF14O94880 888 aa12.89□□□□□ -0.35
CAST-220ENST00000508117 FBLN1P23142 703 aa12.89□□□□□ -0.35
CAST-220ENST00000508117 USHBP1Q8N6Y0 703 aa12.89□□□□□ -0.35
CAST-220ENST00000508117 WWC3Q9ULE0 1092 aa12.89□□□□□ -0.35
CAST-220ENST00000508117 LOC102724428A0A0B4J2F2 783 aa12.88□□□□□ -0.35
CAST-220ENST00000508117 SIK1P57059 783 aa12.88□□□□□ -0.35
CAST-220ENST00000508117 FSTL1Q12841 308 aa12.88□□□□□ -0.35
CAST-220ENST00000508117 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
CAST-220ENST00000508117 PIGBQ92521 554 aa12.88□□□□□ -0.35
CAST-220ENST00000508117 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
CAST-220ENST00000508117 BRCA1P38398 1863 aaKnown RBP12.88□□□□□ -0.35
CAST-220ENST00000508117 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
CAST-220ENST00000508117 N4BP2Q86UW6 1770 aaPredicted RBP12.87□□□□□ -0.35
CAST-220ENST00000508117 FLT4P35916 1363 aa12.87□□□□□ -0.35
CAST-220ENST00000508117 MMP10P09238 476 aa12.87□□□□□ -0.35
CAST-220ENST00000508117 LINC00116Q8NCU8 138 aa12.87□□□□□ -0.35
CAST-220ENST00000508117 NMRK2Q9NPI5 230 aa12.87□□□□□ -0.35
CAST-220ENST00000508117 C10orf71Q711Q0 1435 aa12.87□□□□□ -0.35
CAST-220ENST00000508117 ARFGEF1Q9Y6D6 1849 aa12.86□□□□□ -0.35
CAST-220ENST00000508117 PLEKHG2Q9H7P9 1386 aa12.86□□□□□ -0.35
CAST-220ENST00000508117 FYB1O15117 783 aa12.86□□□□□ -0.35
CAST-220ENST00000508117 NEUROD1Q13562 356 aa12.86□□□□□ -0.35
CAST-220ENST00000508117 HSP90AB2PQ58FF8 381 aa12.86□□□□□ -0.35
CAST-220ENST00000508117 COL13A1Q5TAT6 717 aaPredicted RBP12.86□□□□□ -0.35
CAST-220ENST00000508117 TESK2Q96S53 571 aa12.86□□□□□ -0.35
CAST-220ENST00000508117 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
CAST-220ENST00000508117 GNPATO15228 680 aa12.85□□□□□ -0.35
CAST-220ENST00000508117 SMIM5Q71RC9 77 aa12.85□□□□□ -0.35
CAST-220ENST00000508117 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
CAST-220ENST00000508117 BCS1LQ9Y276 419 aa12.85□□□□□ -0.35
CAST-220ENST00000508117 PRELPP51888 382 aa12.84□□□□□ -0.35
CAST-220ENST00000508117 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
CAST-220ENST00000508117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■■■□□ 15.1
CAST-220ENST00000508117 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
CAST-220ENST00000508117 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
CAST-220ENST00000508117 ITPK1Q13572 414 aa12.83□□□□□ -0.36
CAST-220ENST00000508117 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
CAST-220ENST00000508117 SPG7Q9UQ90 795 aa12.83□□□□□ -0.36
CAST-220ENST00000508117 TONSLQ96HA7 1378 aa12.82□□□□□ -0.36
CAST-220ENST00000508117 C4AP0C0L4 1744 aa12.82□□□□□ -0.36
CAST-220ENST00000508117 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
CAST-220ENST00000508117 TMF1P82094 1093 aa12.82□□□□□ -0.36
CAST-220ENST00000508117 TRAPPC3LQ5T215 181 aa12.82□□□□□ -0.36
CAST-220ENST00000508117 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
CAST-220ENST00000508117 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
CAST-220ENST00000508117 TMOD3Q9NYL9 352 aa12.82□□□□□ -0.36
CAST-220ENST00000508117 KDM2BQ8NHM5 1336 aa12.82□□□□□ -0.36
CAST-220ENST00000508117 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
CAST-220ENST00000508117 TNRC6CQ9HCJ0 1690 aaKnown RBP12.81□□□□□ -0.36
CAST-220ENST00000508117 FCHSD2O94868 740 aa12.81□□□□□ -0.36
CAST-220ENST00000508117 DPEP1P16444 411 aa12.81□□□□□ -0.36
CAST-220ENST00000508117 RC3H1Q5TC82 1133 aaKnown RBP12.81□□□□□ -0.36
CAST-220ENST00000508117 C9orf131Q5VYM1 1079 aa12.81□□□□□ -0.36
CAST-220ENST00000508117 TNS4Q8IZW8 715 aa12.81□□□□□ -0.36
CAST-220ENST00000508117 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
CAST-220ENST00000508117 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
CAST-220ENST00000508117 KDRP35968 1356 aa12.81□□□□□ -0.36
CAST-220ENST00000508117 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
CAST-220ENST00000508117 KCNA3P22001 575 aa12.8□□□□□ -0.36
CAST-220ENST00000508117 ATG3Q9NT62 314 aa12.8□□□□□ -0.36
CAST-220ENST00000508117 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
CAST-220ENST00000508117 ANKRD26Q9UPS8 1709 aa12.79□□□□□ -0.36
CAST-220ENST00000508117 PCNTO95613 3336 aa12.79□□□□□ -0.36
CAST-220ENST00000508117 SBF1O95248 1867 aa12.79□□□□□ -0.36
CAST-220ENST00000508117 GYS1P13807 737 aa12.79□□□□□ -0.36
CAST-220ENST00000508117 HTRA3P83110 453 aa12.79□□□□□ -0.36
CAST-220ENST00000508117 IFNL2Q8IZJ0 200 aa12.79□□□□□ -0.36
CAST-220ENST00000508117 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
CAST-220ENST00000508117 PIM2Q9P1W9 311 aa12.79□□□□□ -0.36
CAST-220ENST00000508117 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
CAST-220ENST00000508117 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
CAST-220ENST00000508117 PHKG2P15735 406 aa12.78□□□□□ -0.36
CAST-220ENST00000508117 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
CAST-220ENST00000508117 ARHGEF1Q92888 912 aaKnown RBP12.78□□□□□ -0.36
CAST-220ENST00000508117 PARP3Q9Y6F1 533 aa12.78□□□□□ -0.36
CAST-220ENST00000508117 CNTNAP4Q9C0A0 1308 aa12.78□□□□□ -0.36
CAST-220ENST00000508117 RPS6KA4O75676 772 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms