RNA–Protein interactions for RNA: ENST00000507816.5

SEC31A-223, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 4

Gene SEC31A, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-223	ENST00000507816	PHKG2	P15735	406 aa		27.7	■■■□□ 2.02
SEC31A-223	ENST00000507816	IFNL2	Q8IZJ0	200 aa		27.7	■■■□□ 2.02
SEC31A-223	ENST00000507816	PLEKHG2	Q9H7P9	1386 aa		27.7	■■■□□ 2.02
SEC31A-223	ENST00000507816	KDR	P35968	1356 aa		27.69	■■■□□ 2.02
SEC31A-223	ENST00000507816	ATG3	Q9NT62	314 aa		27.67	■■■□□ 2.02
SEC31A-223	ENST00000507816	KIF13B	Q9NQT8	1826 aa		27.67	■■■□□ 2.02
SEC31A-223	ENST00000507816	C10orf71	Q711Q0	1435 aa		27.67	■■■□□ 2.02
SEC31A-223	ENST00000507816	TGFB2	P61812	414 aa		27.66	■■■□□ 2.02
SEC31A-223	ENST00000507816	KIAA1551	Q9HCM1	1747 aa		27.66	■■■□□ 2.02
SEC31A-223	ENST00000507816	RTCB	Q9Y3I0	505 aa	Known RBP	27.64	■■■□□ 2.02
SEC31A-223	ENST00000507816	APLP1	P51693	650 aa		27.63	■■■□□ 2.01
SEC31A-223	ENST00000507816	NLGN1	Q8N2Q7	840 aa		27.63	■■■□□ 2.01
SEC31A-223	ENST00000507816	TRAPPC3L	Q5T215	181 aa		27.62	■■■□□ 2.01
SEC31A-223	ENST00000507816	POLK	Q9UBT6	870 aa		27.62	■■■□□ 2.01
SEC31A-223	ENST00000507816	BCS1L	Q9Y276	419 aa		27.62	■■■□□ 2.01
SEC31A-223	ENST00000507816	ZNF831	Q5JPB2	1677 aa		27.62	■■■□□ 2.01
SEC31A-223	ENST00000507816	ADRA2B	P18089	450 aa		27.61	■■■□□ 2.01
SEC31A-223	ENST00000507816	TOMM70	O94826	608 aa		27.6	■■■□□ 2.01
SEC31A-223	ENST00000507816	SLC4A9	Q96Q91	983 aa		27.59	■■■□□ 2.01
SEC31A-223	ENST00000507816	CNTNAP4	Q9C0A0	1308 aa		27.59	■■■□□ 2.01
SEC31A-223	ENST00000507816		A0A0G2JLW4	131 aa		27.58	■■■□□ 2.01
SEC31A-223	ENST00000507816	ERVV-2	B6SEH9	535 aa		27.58	■■■□□ 2.01
SEC31A-223	ENST00000507816	EIF4A2	Q14240	407 aa	Known RBP	27.58	■■■□□ 2.01
SEC31A-223	ENST00000507816	RC3H1	Q5TC82	1133 aa	Known RBP	27.58	■■■□□ 2.01
SEC31A-223	ENST00000507816	CCDC87	Q9NVE4	849 aa		27.58	■■■□□ 2.01
SEC31A-223	ENST00000507816	C4A	P0C0L4	1744 aa		27.58	■■■□□ 2.01
SEC31A-223	ENST00000507816	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.57	■■■□□ 2
SEC31A-223	ENST00000507816	GYS1	P13807	737 aa		27.56	■■■□□ 2
SEC31A-223	ENST00000507816	ARHGEF1	Q92888	912 aa	Known RBP	27.56	■■■□□ 2
SEC31A-223	ENST00000507816	COL5A3	P25940	1745 aa	Predicted RBP	27.55	■■■□□ 2
SEC31A-223	ENST00000507816	HSP90AB1	P08238	724 aa	Known RBP	27.55	■■■□□ 2
SEC31A-223	ENST00000507816	DPEP1	P16444	411 aa		27.55	■■■□□ 2
SEC31A-223	ENST00000507816	DCAF5	Q96JK2	942 aa		27.55	■■■□□ 2
SEC31A-223	ENST00000507816	RBM42	Q9BTD8	480 aa	Known RBP	27.55	■■■□□ 2
SEC31A-223	ENST00000507816	ARHGAP27	Q6ZUM4	889 aa		27.54	■■■□□ 2
SEC31A-223	ENST00000507816	RPS6KA4	O75676	772 aa		27.53	■■■□□ 2
SEC31A-223	ENST00000507816	FCHSD2	O94868	740 aa		27.53	■■■□□ 2
SEC31A-223	ENST00000507816	RFC4	P35249	363 aa		27.53	■■■□□ 2
SEC31A-223	ENST00000507816	PARP3	Q9Y6F1	533 aa		27.53	■■■□□ 2
SEC31A-223	ENST00000507816	DNAJC5G	Q8N7S2	189 aa		27.52	■■■□□ 2
SEC31A-223	ENST00000507816	NMRK2	Q9NPI5	230 aa		27.52	■■■□□ 2
SEC31A-223	ENST00000507816	KDM6A	O15550	1401 aa	Predicted RBP	27.51	■■□□□ 1.99
SEC31A-223	ENST00000507816	BRCA1	P38398	1863 aa	Known RBP	27.5	■■□□□ 1.99
SEC31A-223	ENST00000507816	TNNT2	P45379	298 aa	Predicted RBP	27.48	■■□□□ 1.99
SEC31A-223	ENST00000507816	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.48	■■□□□ 1.99
SEC31A-223	ENST00000507816	KCNA3	P22001	575 aa		27.47	■■□□□ 1.99
SEC31A-223	ENST00000507816	CABP4	P57796	275 aa		27.47	■■□□□ 1.99
SEC31A-223	ENST00000507816	C9orf131	Q5VYM1	1079 aa		27.47	■■□□□ 1.99
SEC31A-223	ENST00000507816	RBM46	Q8TBY0	533 aa	Known RBP	27.47	■■□□□ 1.99
SEC31A-223	ENST00000507816	AMOT	Q4VCS5	1084 aa		27.46	■■□□□ 1.99
SEC31A-223	ENST00000507816	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.46	■■□□□ 1.99
SEC31A-223	ENST00000507816	PIM2	Q9P1W9	311 aa		27.45	■■□□□ 1.98
SEC31A-223	ENST00000507816	ARFGEF1	Q9Y6D6	1849 aa		27.44	■■□□□ 1.98
SEC31A-223	ENST00000507816	CRKL	P46109	303 aa	Known RBP	27.43	■■□□□ 1.98
SEC31A-223	ENST00000507816	WDR90	Q96KV7	1748 aa		27.43	■■□□□ 1.98
SEC31A-223	ENST00000507816	USP42	Q9H9J4	1324 aa	Known RBP	27.42	■■□□□ 1.98
SEC31A-223	ENST00000507816	DALRD3	Q5D0E6	543 aa	Known RBP	27.42	■■□□□ 1.98
SEC31A-223	ENST00000507816	C16orf71	Q8IYS4	520 aa	Predicted RBP	27.42	■■□□□ 1.98
SEC31A-223	ENST00000507816	MYH14	Q7Z406	1995 aa	Known RBP	27.42	■■□□□ 1.98
SEC31A-223	ENST00000507816	PTCD1	O75127	700 aa	Known RBP	27.41	■■□□□ 1.98
SEC31A-223	ENST00000507816	KDM2B	Q8NHM5	1336 aa		27.41	■■□□□ 1.98
SEC31A-223	ENST00000507816	MTHFS	P49914	203 aa		27.4	■■□□□ 1.98
SEC31A-223	ENST00000507816	DDR1	Q08345	913 aa		27.4	■■□□□ 1.98
SEC31A-223	ENST00000507816	FSTL1	Q12841	308 aa		27.4	■■□□□ 1.98
SEC31A-223	ENST00000507816	FKBP8	Q14318	412 aa		27.4	■■□□□ 1.98
SEC31A-223	ENST00000507816	SRP68	Q9UHB9	627 aa	Known RBP	27.4	■■□□□ 1.98
SEC31A-223	ENST00000507816	KCP	Q6ZWJ8	1503 aa		27.4	■■□□□ 1.98
SEC31A-223	ENST00000507816	C1orf141	Q5JVX7	400 aa		27.39	■■□□□ 1.98
SEC31A-223	ENST00000507816	POLR3GL	Q9BT43	218 aa		27.38	■■□□□ 1.97
SEC31A-223	ENST00000507816	RNF181	Q9P0P0	153 aa		27.38	■■□□□ 1.97
SEC31A-223	ENST00000507816	TJP1	Q07157	1748 aa		27.38	■■□□□ 1.97
SEC31A-223	ENST00000507816	KLRG1	Q96E93	195 aa		27.37	■■□□□ 1.97
SEC31A-223	ENST00000507816	TIMELESS	Q9UNS1	1208 aa		27.37	■■□□□ 1.97
SEC31A-223	ENST00000507816	AEBP1	Q8IUX7	1158 aa		27.36	■■□□□ 1.97
SEC31A-223	ENST00000507816	NFATC2IP	Q8NCF5	419 aa		27.36	■■□□□ 1.97
SEC31A-223	ENST00000507816	POLRMT	O00411	1230 aa	Known RBP	27.34	■■□□□ 1.97
SEC31A-223	ENST00000507816	CHRNA5	P30532	468 aa		27.34	■■□□□ 1.97
SEC31A-223	ENST00000507816	JMY	Q8N9B5	988 aa		27.34	■■□□□ 1.97
SEC31A-223	ENST00000507816	ADAMTS7	Q9UKP4	1686 aa		27.33	■■□□□ 1.97
SEC31A-223	ENST00000507816	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.33	■■□□□ 1.97
SEC31A-223	ENST00000507816	HTRA3	P83110	453 aa		27.32	■■□□□ 1.96
SEC31A-223	ENST00000507816	INTS5	Q6P9B9	1019 aa	Known RBP	27.32	■■□□□ 1.96
SEC31A-223	ENST00000507816	TM4SF1	P30408	202 aa		27.31	■■□□□ 1.96
SEC31A-223	ENST00000507816	ZC3H4	Q9UPT8	1303 aa	Known RBP	27.31	■■□□□ 1.96
SEC31A-223	ENST00000507816	PANK3	Q9H999	370 aa		27.3	■■□□□ 1.96
SEC31A-223	ENST00000507816	RRAGC	Q9HB90	399 aa		27.3	■■□□□ 1.96
SEC31A-223	ENST00000507816	SULT6B1	Q6IMI4	303 aa		27.29	■■□□□ 1.96
SEC31A-223	ENST00000507816	SOS1	Q07889	1333 aa	Predicted RBP	27.28	■■□□□ 1.96
SEC31A-223	ENST00000507816	ZPR1	O75312	459 aa		27.28	■■□□□ 1.96
SEC31A-223	ENST00000507816	USPL1	Q5W0Q7	1092 aa		27.27	■■□□□ 1.96
SEC31A-223	ENST00000507816	SMC1B	Q8NDV3	1235 aa		27.27	■■□□□ 1.96
SEC31A-223	ENST00000507816	MORC1	Q86VD1	984 aa		27.26	■■□□□ 1.95
SEC31A-223	ENST00000507816	DNAJC10	Q8IXB1	793 aa		27.26	■■□□□ 1.95
SEC31A-223	ENST00000507816	MRC1	P22897	1456 aa		27.25	■■□□□ 1.95
SEC31A-223	ENST00000507816	SCN11A	Q9UI33	1791 aa		27.25	■■□□□ 1.95
SEC31A-223	ENST00000507816	RASSF7	Q02833	373 aa		27.24	■■□□□ 1.95
SEC31A-223	ENST00000507816	AKAP4	Q5JQC9	854 aa		27.24	■■□□□ 1.95
SEC31A-223	ENST00000507816	COL13A1	Q5TAT6	717 aa	Predicted RBP	27.24	■■□□□ 1.95
SEC31A-223	ENST00000507816	SLC52A2	Q9HAB3	445 aa		27.24	■■□□□ 1.95
SEC31A-223	ENST00000507816	PCNT	O95613	3336 aa		27.23	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms