RNA–Protein interactions for RNA: ENST00000507407.1

SLC9A3-202, Transcript of solute carrier family 9 member A3, humanhuman

TSL 3

Gene SLC9A3, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3-202ENST00000507407 U2SURPO15042 1029 aaKnown RBP21.77■■□□□ 1.08
SLC9A3-202ENST00000507407 PPP2R1AP30153 589 aa21.77■■□□□ 1.08
SLC9A3-202ENST00000507407 COL23A1Q86Y22 540 aaPredicted RBP21.77■■□□□ 1.08
SLC9A3-202ENST00000507407 C4BP0C0L5 1744 aa21.76■■□□□ 1.07
SLC9A3-202ENST00000507407 NFATC2IPQ8NCF5 419 aa21.76■■□□□ 1.07
SLC9A3-202ENST00000507407 TUBGCP6Q96RT7 1819 aa21.76■■□□□ 1.07
SLC9A3-202ENST00000507407 MTHFSDQ2M296 383 aaKnown RBP21.75■■□□□ 1.07
SLC9A3-202ENST00000507407 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
SLC9A3-202ENST00000507407 SSFA2P28290 1259 aa21.74■■□□□ 1.07
SLC9A3-202ENST00000507407 SYT17Q9BSW7 474 aa21.74■■□□□ 1.07
SLC9A3-202ENST00000507407 FHDC1Q9C0D6 1143 aaPredicted RBP21.74■■□□□ 1.07
SLC9A3-202ENST00000507407 MAP3K5Q99683 1374 aa21.74■■□□□ 1.07
SLC9A3-202ENST00000507407 COL24A1Q17RW2 1714 aa21.73■■□□□ 1.07
SLC9A3-202ENST00000507407 LINC00116Q8NCU8 138 aa21.73■■□□□ 1.07
SLC9A3-202ENST00000507407 GAS2L2Q8NHY3 880 aa21.73■■□□□ 1.07
SLC9A3-202ENST00000507407 RBM42Q9BTD8 480 aaKnown RBP21.73■■□□□ 1.07
SLC9A3-202ENST00000507407 SCN11AQ9UI33 1791 aa21.72■■□□□ 1.07
SLC9A3-202ENST00000507407 ITPK1Q13572 414 aa21.72■■□□□ 1.07
SLC9A3-202ENST00000507407 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
SLC9A3-202ENST00000507407 RNMTO43148 476 aaKnown RBP21.71■■□□□ 1.07
SLC9A3-202ENST00000507407 RC3H1Q5TC82 1133 aaKnown RBP21.71■■□□□ 1.07
SLC9A3-202ENST00000507407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.7■■□□□ 1.06
SLC9A3-202ENST00000507407 LGR6Q9HBX8 967 aa21.7■■□□□ 1.06
SLC9A3-202ENST00000507407 GNPATO15228 680 aa21.69■■□□□ 1.06
SLC9A3-202ENST00000507407 FCHSD2O94868 740 aa21.68■■□□□ 1.06
SLC9A3-202ENST00000507407 SLC4A9Q96Q91 983 aa21.68■■□□□ 1.06
SLC9A3-202ENST00000507407 UBR3Q6ZT12 1888 aa21.68■■□□□ 1.06
SLC9A3-202ENST00000507407 CNTNAP4Q9C0A0 1308 aa21.67■■□□□ 1.06
SLC9A3-202ENST00000507407 GNAT3A8MTJ3 354 aa21.67■■□□□ 1.06
SLC9A3-202ENST00000507407 PTCD1O75127 700 aaKnown RBP21.67■■□□□ 1.06
SLC9A3-202ENST00000507407 U2AF1L5P0DN76 240 aaPredicted RBP21.67■■□□□ 1.06
SLC9A3-202ENST00000507407 ADRA2BP18089 450 aa21.67■■□□□ 1.06
SLC9A3-202ENST00000507407 U2AF1Q01081 240 aaKnown RBP eCLIP21.67■■□□□ 1.06
SLC9A3-202ENST00000507407 RSPH6AQ9H0K4 717 aa21.67■■□□□ 1.06
SLC9A3-202ENST00000507407 RTCBQ9Y3I0 505 aaKnown RBP21.67■■□□□ 1.06
SLC9A3-202ENST00000507407 MRC1P22897 1456 aa21.66■■□□□ 1.06
SLC9A3-202ENST00000507407 PHF14O94880 888 aa21.66■■□□□ 1.06
SLC9A3-202ENST00000507407 TRAPPC3LQ5T215 181 aa21.66■■□□□ 1.06
SLC9A3-202ENST00000507407 PRKAR2BP31323 418 aa21.65■■□□□ 1.06
SLC9A3-202ENST00000507407 ADAMTS7Q9UKP4 1686 aa21.65■■□□□ 1.06
SLC9A3-202ENST00000507407 RPS6KA4O75676 772 aa21.64■■□□□ 1.05
SLC9A3-202ENST00000507407 ZEB1P37275 1124 aaPredicted RBP21.64■■□□□ 1.05
SLC9A3-202ENST00000507407 RALBP1Q15311 655 aa21.64■■□□□ 1.05
SLC9A3-202ENST00000507407 AMIGO3Q86WK7 504 aa21.64■■□□□ 1.05
SLC9A3-202ENST00000507407 TEFQ10587 303 aa21.62■■□□□ 1.05
SLC9A3-202ENST00000507407 MSL1Q68DK7 614 aa21.62■■□□□ 1.05
SLC9A3-202ENST00000507407 VSIG10Q8N0Z9 540 aa21.62■■□□□ 1.05
SLC9A3-202ENST00000507407 COL5A3P25940 1745 aaPredicted RBP21.61■■□□□ 1.05
SLC9A3-202ENST00000507407 NEFMP07197 916 aa21.61■■□□□ 1.05
SLC9A3-202ENST00000507407 DDX10Q13206 875 aaKnown RBP21.61■■□□□ 1.05
SLC9A3-202ENST00000507407 IL17REQ8NFR9 667 aa21.61■■□□□ 1.05
SLC9A3-202ENST00000507407 PHACTR3Q96KR7 559 aa21.61■■□□□ 1.05
SLC9A3-202ENST00000507407 CICQ96RK0 1608 aaPredicted RBP21.61■■□□□ 1.05
SLC9A3-202ENST00000507407 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
SLC9A3-202ENST00000507407 CRKLP46109 303 aaKnown RBP21.6■■□□□ 1.05
SLC9A3-202ENST00000507407 TTC5Q8N0Z6 440 aa21.6■■□□□ 1.05
SLC9A3-202ENST00000507407 KLHL34Q8N239 644 aa21.6■■□□□ 1.05
SLC9A3-202ENST00000507407 NLGN1Q8N2Q7 840 aa21.6■■□□□ 1.05
SLC9A3-202ENST00000507407 PNNQ9H307 717 aaKnown RBP21.6■■□□□ 1.05
SLC9A3-202ENST00000507407 CD2APQ9Y5K6 639 aa21.6■■□□□ 1.05
SLC9A3-202ENST00000507407 RFC4P35249 363 aa21.59■■□□□ 1.05
SLC9A3-202ENST00000507407 ARHGEF1Q92888 912 aaKnown RBP21.59■■□□□ 1.05
SLC9A3-202ENST00000507407 HTATSF1O43719 755 aaKnown RBP21.58■■□□□ 1.05
SLC9A3-202ENST00000507407 SLC39A6Q13433 755 aa21.58■■□□□ 1.05
SLC9A3-202ENST00000507407 SMIM5Q71RC9 77 aa21.58■■□□□ 1.05
SLC9A3-202ENST00000507407 RTF1Q92541 710 aaKnown RBP21.58■■□□□ 1.05
SLC9A3-202ENST00000507407 CEMIPQ8WUJ3 1361 aa21.58■■□□□ 1.04
SLC9A3-202ENST00000507407 TEX13AQ9BXU3 409 aaPredicted RBP21.56■■□□□ 1.04
SLC9A3-202ENST00000507407 ZNF790Q6PG37 636 aa21.55■■□□□ 1.04
SLC9A3-202ENST00000507407 DNAJC10Q8IXB1 793 aa21.55■■□□□ 1.04
SLC9A3-202ENST00000507407 CCDC87Q9NVE4 849 aa21.55■■□□□ 1.04
SLC9A3-202ENST00000507407 TJP1Q07157 1748 aa21.55■■□□□ 1.04
SLC9A3-202ENST00000507407 CYP19A1P11511 503 aaPredicted RBP21.54■■□□□ 1.04
SLC9A3-202ENST00000507407 GPR162Q16538 588 aa21.54■■□□□ 1.04
SLC9A3-202ENST00000507407 INTS5Q6P9B9 1019 aaKnown RBP21.54■■□□□ 1.04
SLC9A3-202ENST00000507407 KCPQ6ZWJ8 1503 aa21.54■■□□□ 1.04
SLC9A3-202ENST00000507407 STARD3NLO95772 234 aa21.53■■□□□ 1.04
SLC9A3-202ENST00000507407 YY1P25490 414 aa21.53■■□□□ 1.04
SLC9A3-202ENST00000507407 MYH14Q7Z406 1995 aaKnown RBP21.53■■□□□ 1.04
SLC9A3-202ENST00000507407 BTBD11A6QL63 1104 aa21.52■■□□□ 1.04
SLC9A3-202ENST00000507407 NLGN2Q8NFZ4 835 aa21.52■■□□□ 1.04
SLC9A3-202ENST00000507407 MMP10P09238 476 aa21.51■■□□□ 1.03
SLC9A3-202ENST00000507407 GYS1P13807 737 aa21.51■■□□□ 1.03
SLC9A3-202ENST00000507407 FMNL2Q96PY5 1086 aa21.51■■□□□ 1.03
SLC9A3-202ENST00000507407 MYBBP1AQ9BQG0 1328 aaKnown RBP21.51■■□□□ 1.03
SLC9A3-202ENST00000507407 UBR2Q8IWV8 1755 aa21.51■■□□□ 1.03
SLC9A3-202ENST00000507407 SIPA1L3O60292 1781 aaPredicted RBP21.5■■□□□ 1.03
SLC9A3-202ENST00000507407 GRIN3BO60391 1043 aa21.49■■□□□ 1.03
SLC9A3-202ENST00000507407 ZNF496Q96IT1 587 aaPredicted RBP21.49■■□□□ 1.03
SLC9A3-202ENST00000507407 PLEKHF1Q96S99 279 aa21.49■■□□□ 1.03
SLC9A3-202ENST00000507407 SOS1Q07889 1333 aaPredicted RBP21.49■■□□□ 1.03
SLC9A3-202ENST00000507407 USP42Q9H9J4 1324 aaKnown RBP21.49■■□□□ 1.03
SLC9A3-202ENST00000507407 HEG1Q9ULI3 1381 aa21.48■■□□□ 1.03
SLC9A3-202ENST00000507407 ZPR1O75312 459 aa21.48■■□□□ 1.03
SLC9A3-202ENST00000507407 PARP3Q9Y6F1 533 aa21.48■■□□□ 1.03
SLC9A3-202ENST00000507407 MAPK8IP3Q9UPT6 1336 aa21.48■■□□□ 1.03
SLC9A3-202ENST00000507407 MCM10Q7L590 875 aa21.47■■□□□ 1.03
SLC9A3-202ENST00000507407 PELP1Q8IZL8 1130 aaKnown RBP21.46■■□□□ 1.03
SLC9A3-202ENST00000507407 C4AP0C0L4 1744 aa21.46■■□□□ 1.03
SLC9A3-202ENST00000507407 A0A087WZG4 1122 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms