RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SLFN5Q08AF3 891 aa18.52■□□□□ 0.56
RNF4-208ENST00000507247 TEFQ10587 303 aa18.52■□□□□ 0.56
RNF4-208ENST00000507247 SLC52A2Q9HAB3 445 aa18.52■□□□□ 0.56
RNF4-208ENST00000507247 NHSQ6T4R5 1651 aa18.52■□□□□ 0.56
RNF4-208ENST00000507247 BCL9O00512 1426 aa18.51■□□□□ 0.55
RNF4-208ENST00000507247 CFAP44Q96MT7 982 aa18.51■□□□□ 0.55
RNF4-208ENST00000507247 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
RNF4-208ENST00000507247 LAS1LQ9Y4W2 734 aaKnown RBP18.51■□□□□ 0.55
RNF4-208ENST00000507247 CABP4P57796 275 aa18.5■□□□□ 0.55
RNF4-208ENST00000507247 GNAI1P63096 354 aa18.5■□□□□ 0.55
RNF4-208ENST00000507247 TAF7Q15545 349 aaPredicted RBP18.5■□□□□ 0.55
RNF4-208ENST00000507247 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
RNF4-208ENST00000507247 NFATC2IPQ8NCF5 419 aa18.5■□□□□ 0.55
RNF4-208ENST00000507247 ACSBG1Q96GR2 724 aa18.5■□□□□ 0.55
RNF4-208ENST00000507247 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
RNF4-208ENST00000507247 E9PSI1 815 aa18.49■□□□□ 0.55
RNF4-208ENST00000507247 CHL1O00533 1208 aa18.49■□□□□ 0.55
RNF4-208ENST00000507247 TSR2Q969E8 191 aaKnown RBP18.49■□□□□ 0.55
RNF4-208ENST00000507247 MBIPQ9NS73 344 aa18.49■□□□□ 0.55
RNF4-208ENST00000507247 FANCIQ9NVI1 1328 aa18.49■□□□□ 0.55
RNF4-208ENST00000507247 UBR2Q8IWV8 1755 aa18.48■□□□□ 0.55
RNF4-208ENST00000507247 PRIM1P49642 420 aaKnown RBP18.48■□□□□ 0.55
RNF4-208ENST00000507247 DUSP27Q5VZP5 1158 aa18.48■□□□□ 0.55
RNF4-208ENST00000507247 BTAF1O14981 1849 aa18.48■□□□□ 0.55
RNF4-208ENST00000507247 PIGBQ92521 554 aa18.47■□□□□ 0.55
RNF4-208ENST00000507247 TMOD3Q9NYL9 352 aa18.47■□□□□ 0.55
RNF4-208ENST00000507247 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
RNF4-208ENST00000507247 BTBD11A6QL63 1104 aa18.46■□□□□ 0.55
RNF4-208ENST00000507247 KCNQ3O43525 872 aa18.46■□□□□ 0.55
RNF4-208ENST00000507247 KCNQ2O43526 872 aa18.46■□□□□ 0.55
RNF4-208ENST00000507247 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
RNF4-208ENST00000507247 MYH16Q9H6N6 1097 aa18.46■□□□□ 0.55
RNF4-208ENST00000507247 EP400Q96L91 3159 aa18.46■□□□□ 0.55
RNF4-208ENST00000507247 SLC39A6Q13433 755 aa18.45■□□□□ 0.54
RNF4-208ENST00000507247 PTF1AQ7RTS3 328 aa18.45■□□□□ 0.54
RNF4-208ENST00000507247 BABAM1Q9NWV8 329 aa18.45■□□□□ 0.54
RNF4-208ENST00000507247 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
RNF4-208ENST00000507247 KCPQ6ZWJ8 1503 aa18.44■□□□□ 0.54
RNF4-208ENST00000507247 C5P01031 1676 aa18.42■□□□□ 0.54
RNF4-208ENST00000507247 KRT24Q2M2I5 525 aa18.42■□□□□ 0.54
RNF4-208ENST00000507247 ZNF790Q6PG37 636 aa18.42■□□□□ 0.54
RNF4-208ENST00000507247 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
RNF4-208ENST00000507247 EXOSC9Q06265 439 aaKnown RBP18.41■□□□□ 0.54
RNF4-208ENST00000507247 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
RNF4-208ENST00000507247 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
RNF4-208ENST00000507247 EIF4A1P60842 406 aaKnown RBP18.4■□□□□ 0.54
RNF4-208ENST00000507247 TSPYL6Q8N831 410 aa18.39■□□□□ 0.53
RNF4-208ENST00000507247 C8orf58Q8NAV2 365 aa18.39■□□□□ 0.53
RNF4-208ENST00000507247 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
RNF4-208ENST00000507247 LY75O60449 1722 aa18.38■□□□□ 0.53
RNF4-208ENST00000507247 LAMB4A4D0S4 1761 aa18.38■□□□□ 0.53
RNF4-208ENST00000507247 TRIM37O94972 964 aa18.38■□□□□ 0.53
RNF4-208ENST00000507247 TTC5Q8N0Z6 440 aa18.38■□□□□ 0.53
RNF4-208ENST00000507247 ZNF496Q96IT1 587 aaPredicted RBP18.38■□□□□ 0.53
RNF4-208ENST00000507247 BCL11BQ9C0K0 894 aaPredicted RBP18.38■□□□□ 0.53
RNF4-208ENST00000507247 TJP1Q07157 1748 aa18.37■□□□□ 0.53
RNF4-208ENST00000507247 ELL2O00472 640 aaPredicted RBP18.36■□□□□ 0.53
RNF4-208ENST00000507247 CICQ96RK0 1608 aaPredicted RBP18.35■□□□□ 0.53
RNF4-208ENST00000507247 PALLDQ8WX93 1383 aa18.35■□□□□ 0.53
RNF4-208ENST00000507247 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
RNF4-208ENST00000507247 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
RNF4-208ENST00000507247 DEFB132Q7Z7B7 95 aa18.35■□□□□ 0.53
RNF4-208ENST00000507247 CCDC125Q86Z20 511 aa18.35■□□□□ 0.53
RNF4-208ENST00000507247 FMNL2Q96PY5 1086 aa18.35■□□□□ 0.53
RNF4-208ENST00000507247 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
RNF4-208ENST00000507247 TWISTNBQ3B726 338 aaPredicted RBP18.34■□□□□ 0.53
RNF4-208ENST00000507247 SLC4A9Q96Q91 983 aa18.34■□□□□ 0.53
RNF4-208ENST00000507247 VAMP4O75379 141 aa18.33■□□□□ 0.52
RNF4-208ENST00000507247 GIGYF1O75420 1035 aaPredicted RBP18.33■□□□□ 0.52
RNF4-208ENST00000507247 SMARCC1Q92922 1105 aaPredicted RBP18.33■□□□□ 0.52
RNF4-208ENST00000507247 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
RNF4-208ENST00000507247 COL5A3P25940 1745 aaPredicted RBP18.32■□□□□ 0.52
RNF4-208ENST00000507247 TAF1LQ8IZX4 1826 aa18.31■□□□□ 0.52
RNF4-208ENST00000507247 RGPD3A6NKT7 1758 aaPredicted RBP18.3■□□□□ 0.52
RNF4-208ENST00000507247 RGPD4Q7Z3J3 1758 aa18.3■□□□□ 0.52
RNF4-208ENST00000507247 CENPBP07199 599 aaPredicted RBP18.3■□□□□ 0.52
RNF4-208ENST00000507247 HOXB7P09629 217 aa18.3■□□□□ 0.52
RNF4-208ENST00000507247 SNRPA1P09661 255 aaKnown RBP18.3■□□□□ 0.52
RNF4-208ENST00000507247 CT47B1P0C2W7 299 aaPredicted RBP18.3■□□□□ 0.52
RNF4-208ENST00000507247 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
RNF4-208ENST00000507247 LOC102724428A0A0B4J2F2 783 aa18.29■□□□□ 0.52
RNF4-208ENST00000507247 SIK1P57059 783 aa18.29■□□□□ 0.52
RNF4-208ENST00000507247 VSIG10Q8N0Z9 540 aa18.29■□□□□ 0.52
RNF4-208ENST00000507247 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
RNF4-208ENST00000507247 DNAJC10Q8IXB1 793 aa18.28■□□□□ 0.52
RNF4-208ENST00000507247 NECTIN2Q92692 538 aa18.28■□□□□ 0.52
RNF4-208ENST00000507247 CACNA1FO60840 1977 aa18.28■□□□□ 0.52
RNF4-208ENST00000507247 TCERG1O14776 1098 aaKnown RBP18.27■□□□□ 0.52
RNF4-208ENST00000507247 APBA3O96018 575 aa18.27■□□□□ 0.52
RNF4-208ENST00000507247 EIF2S2P20042 333 aaKnown RBP18.27■□□□□ 0.52
RNF4-208ENST00000507247 RARSP54136 660 aaKnown RBP18.27■□□□□ 0.52
RNF4-208ENST00000507247 KCNQ4P56696 695 aa18.27■□□□□ 0.52
RNF4-208ENST00000507247 ITPK1Q13572 414 aa18.27■□□□□ 0.52
RNF4-208ENST00000507247 HDGFL1Q5TGJ6 251 aa18.27■□□□□ 0.52
RNF4-208ENST00000507247 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.52
RNF4-208ENST00000507247 MYH14Q7Z406 1995 aaKnown RBP18.26■□□□□ 0.51
RNF4-208ENST00000507247 RREB1Q92766 1687 aa18.26■□□□□ 0.51
RNF4-208ENST00000507247 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
RNF4-208ENST00000507247 SSH1Q8WYL5 1049 aa18.26■□□□□ 0.51
RNF4-208ENST00000507247 ZNF428Q96B54 188 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms