RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 ADCY9O60503 1353 aa31.76■■■□□ 2.67
CALCOCO2-209ENST00000507076 N4BP2Q86UW6 1770 aaPredicted RBP31.76■■■□□ 2.67
CALCOCO2-209ENST00000507076 TIMELESSQ9UNS1 1208 aa31.75■■■□□ 2.67
CALCOCO2-209ENST00000507076 ZNF831Q5JPB2 1677 aa31.75■■■□□ 2.67
CALCOCO2-209ENST00000507076 KIAA1551Q9HCM1 1747 aa31.75■■■□□ 2.67
CALCOCO2-209ENST00000507076 ZNF526Q8TF50 670 aaPredicted RBP31.74■■■□□ 2.67
CALCOCO2-209ENST00000507076 KDRP35968 1356 aa31.73■■■□□ 2.67
CALCOCO2-209ENST00000507076 GPBP1L1Q9HC44 474 aaPredicted RBP31.73■■■□□ 2.67
CALCOCO2-209ENST00000507076 CICQ96RK0 1608 aaPredicted RBP31.71■■■□□ 2.67
CALCOCO2-209ENST00000507076 C4AP0C0L4 1744 aa31.7■■■□□ 2.67
CALCOCO2-209ENST00000507076 MYH14Q7Z406 1995 aaKnown RBP31.69■■■□□ 2.66
CALCOCO2-209ENST00000507076 MMP10P09238 476 aa31.69■■■□□ 2.66
CALCOCO2-209ENST00000507076 PLEKHG2Q9H7P9 1386 aa31.68■■■□□ 2.66
CALCOCO2-209ENST00000507076 RBM42Q9BTD8 480 aaKnown RBP31.68■■■□□ 2.66
CALCOCO2-209ENST00000507076 SLC4A9Q96Q91 983 aa31.67■■■□□ 2.66
CALCOCO2-209ENST00000507076 PCGF6Q9BYE7 350 aa31.66■■■□□ 2.66
CALCOCO2-209ENST00000507076 KDM6AO15550 1401 aaPredicted RBP31.66■■■□□ 2.66
CALCOCO2-209ENST00000507076 PXDNLA1KZ92 1463 aa31.65■■■□□ 2.66
CALCOCO2-209ENST00000507076 RTCBQ9Y3I0 505 aaKnown RBP31.65■■■□□ 2.66
CALCOCO2-209ENST00000507076 ERVV-2B6SEH9 535 aa31.64■■■□□ 2.66
CALCOCO2-209ENST00000507076 DCAF5Q96JK2 942 aa31.64■■■□□ 2.66
CALCOCO2-209ENST00000507076 PANK3Q9H999 370 aa31.64■■■□□ 2.66
CALCOCO2-209ENST00000507076 TRAPPC3LQ5T215 181 aa31.63■■■□□ 2.65
CALCOCO2-209ENST00000507076 ZNF530Q6P9A1 599 aaPredicted RBP31.63■■■□□ 2.65
CALCOCO2-209ENST00000507076 CEP350Q5VT06 3117 aa31.63■■■□□ 2.65
CALCOCO2-209ENST00000507076 BRCA1P38398 1863 aaKnown RBP31.63■■■□□ 2.65
CALCOCO2-209ENST00000507076 HSP90AB1P08238 724 aaKnown RBP31.62■■■□□ 2.65
CALCOCO2-209ENST00000507076 PLEKHO1Q53GL0 409 aaPredicted RBP31.62■■■□□ 2.65
CALCOCO2-209ENST00000507076 CLSPNQ9HAW4 1339 aa31.62■■■□□ 2.65
CALCOCO2-209ENST00000507076 HSPA5P11021 654 aaKnown RBP31.61■■■□□ 2.65
CALCOCO2-209ENST00000507076 EIF4G2P78344 907 aaKnown RBP eCLIP31.6■■■□□ 2.65
CALCOCO2-209ENST00000507076 SCN11AQ9UI33 1791 aa31.6■■■□□ 2.65
CALCOCO2-209ENST00000507076 C10orf71Q711Q0 1435 aa31.59■■■□□ 2.65
CALCOCO2-209ENST00000507076 VIRMAQ69YN4 1812 aaKnown RBP31.59■■■□□ 2.65
CALCOCO2-209ENST00000507076 CNTNAP4Q9C0A0 1308 aa31.59■■■□□ 2.65
CALCOCO2-209ENST00000507076 TJP1Q07157 1748 aa31.59■■■□□ 2.65
CALCOCO2-209ENST00000507076 CABP4P57796 275 aa31.59■■■□□ 2.65
CALCOCO2-209ENST00000507076 AEBP1Q8IUX7 1158 aa31.59■■■□□ 2.65
CALCOCO2-209ENST00000507076 ARHGEF1Q92888 912 aaKnown RBP31.59■■■□□ 2.65
CALCOCO2-209ENST00000507076 RC3H1Q5TC82 1133 aaKnown RBP31.57■■■□□ 2.64
CALCOCO2-209ENST00000507076 NLGN1Q8N2Q7 840 aa31.57■■■□□ 2.64
CALCOCO2-209ENST00000507076 AMOTQ4VCS5 1084 aa31.56■■■□□ 2.64
CALCOCO2-209ENST00000507076 A0A0G2JLW4 131 aa31.55■■■□□ 2.64
CALCOCO2-209ENST00000507076 ADRA2BP18089 450 aa31.55■■■□□ 2.64
CALCOCO2-209ENST00000507076 BCS1LQ9Y276 419 aa31.55■■■□□ 2.64
CALCOCO2-209ENST00000507076 RPS6KA4O75676 772 aa31.54■■■□□ 2.64
CALCOCO2-209ENST00000507076 GYS1P13807 737 aa31.54■■■□□ 2.64
CALCOCO2-209ENST00000507076 RFC4P35249 363 aa31.54■■■□□ 2.64
CALCOCO2-209ENST00000507076 MTHFSP49914 203 aa31.54■■■□□ 2.64
CALCOCO2-209ENST00000507076 MORC1Q86VD1 984 aa31.54■■■□□ 2.64
CALCOCO2-209ENST00000507076 ARFGEF1Q9Y6D6 1849 aa31.54■■■□□ 2.64
CALCOCO2-209ENST00000507076 PTCD1O75127 700 aaKnown RBP31.53■■■□□ 2.64
CALCOCO2-209ENST00000507076 TGFB2P61812 414 aa31.53■■■□□ 2.64
CALCOCO2-209ENST00000507076 C1orf141Q5JVX7 400 aa31.53■■■□□ 2.64
CALCOCO2-209ENST00000507076 HSPA6P17066 643 aa31.52■■■□□ 2.64
CALCOCO2-209ENST00000507076 CCDC87Q9NVE4 849 aa31.51■■■□□ 2.63
CALCOCO2-209ENST00000507076 SULT6B1Q6IMI4 303 aa31.5■■■□□ 2.63
CALCOCO2-209ENST00000507076 PARP3Q9Y6F1 533 aa31.5■■■□□ 2.63
CALCOCO2-209ENST00000507076 KIF3CO14782 793 aa31.49■■■□□ 2.63
CALCOCO2-209ENST00000507076 DPEP1P16444 411 aa31.49■■■□□ 2.63
CALCOCO2-209ENST00000507076 NFATC2IPQ8NCF5 419 aa31.49■■■□□ 2.63
CALCOCO2-209ENST00000507076 CRKLP46109 303 aaKnown RBP31.48■■■□□ 2.63
CALCOCO2-209ENST00000507076 ADAMTS7Q9UKP4 1686 aa31.47■■■□□ 2.63
CALCOCO2-209ENST00000507076 SRP68Q9UHB9 627 aaKnown RBP31.46■■■□□ 2.63
CALCOCO2-209ENST00000507076 FCHSD2O94868 740 aa31.45■■■□□ 2.63
CALCOCO2-209ENST00000507076 ARHGAP27Q6ZUM4 889 aa31.45■■■□□ 2.63
CALCOCO2-209ENST00000507076 KNSTRNQ9Y448 316 aa31.43■■■□□ 2.62
CALCOCO2-209ENST00000507076 IL13P35225 146 aa31.42■■■□□ 2.62
CALCOCO2-209ENST00000507076 FKBP8Q14318 412 aa31.41■■■□□ 2.62
CALCOCO2-209ENST00000507076 USP42Q9H9J4 1324 aaKnown RBP31.41■■■□□ 2.62
CALCOCO2-209ENST00000507076 KCNA3P22001 575 aa31.39■■■□□ 2.62
CALCOCO2-209ENST00000507076 DDR1Q08345 913 aa31.39■■■□□ 2.62
CALCOCO2-209ENST00000507076 AFDNP55196 1824 aaKnown RBP31.39■■■□□ 2.62
CALCOCO2-209ENST00000507076 IFFO2Q5TF58 517 aa31.38■■■□□ 2.61
CALCOCO2-209ENST00000507076 SBF1O95248 1867 aa31.37■■■□□ 2.61
CALCOCO2-209ENST00000507076 MRC1P22897 1456 aa31.36■■■□□ 2.61
CALCOCO2-209ENST00000507076 INTS5Q6P9B9 1019 aaKnown RBP31.36■■■□□ 2.61
CALCOCO2-209ENST00000507076 AKAP4Q5JQC9 854 aa31.35■■■□□ 2.61
CALCOCO2-209ENST00000507076 DNAJC10Q8IXB1 793 aa31.35■■■□□ 2.61
CALCOCO2-209ENST00000507076 NMRK2Q9NPI5 230 aa31.35■■■□□ 2.61
CALCOCO2-209ENST00000507076 SLC52A2Q9HAB3 445 aa31.34■■■□□ 2.61
CALCOCO2-209ENST00000507076 LGR6Q9HBX8 967 aa31.34■■■□□ 2.61
CALCOCO2-209ENST00000507076 PIM2Q9P1W9 311 aa31.34■■■□□ 2.61
CALCOCO2-209ENST00000507076 AMER1Q5JTC6 1135 aaPredicted RBP31.33■■■□□ 2.61
CALCOCO2-209ENST00000507076 HMOX1P09601 288 aa31.32■■■□□ 2.6
CALCOCO2-209ENST00000507076 C9orf131Q5VYM1 1079 aa31.32■■■□□ 2.6
CALCOCO2-209ENST00000507076 CCER1Q8TC90 406 aaPredicted RBP31.32■■■□□ 2.6
CALCOCO2-209ENST00000507076 KCPQ6ZWJ8 1503 aa31.32■■■□□ 2.6
CALCOCO2-209ENST00000507076 TOMM70O94826 608 aa31.31■■■□□ 2.6
CALCOCO2-209ENST00000507076 CHRNA5P30532 468 aa31.31■■■□□ 2.6
CALCOCO2-209ENST00000507076 UBR2Q8IWV8 1755 aa31.3■■■□□ 2.6
CALCOCO2-209ENST00000507076 POLRMTO00411 1230 aaKnown RBP31.3■■■□□ 2.6
CALCOCO2-209ENST00000507076 SLC39A6Q13433 755 aa31.3■■■□□ 2.6
CALCOCO2-209ENST00000507076 DALRD3Q5D0E6 543 aaKnown RBP31.3■■■□□ 2.6
CALCOCO2-209ENST00000507076 SOS1Q07889 1333 aaPredicted RBP31.29■■■□□ 2.6
CALCOCO2-209ENST00000507076 RNMTO43148 476 aaKnown RBP31.29■■■□□ 2.6
CALCOCO2-209ENST00000507076 USPL1Q5W0Q7 1092 aa31.29■■■□□ 2.6
CALCOCO2-209ENST00000507076 DLEC1Q9Y238 1755 aa31.29■■■□□ 2.6
CALCOCO2-209ENST00000507076 WDR90Q96KV7 1748 aa31.29■■■□□ 2.6
CALCOCO2-209ENST00000507076 ZPR1O75312 459 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms