RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
CHD1-204ENST00000505982 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
CHD1-204ENST00000505982 CNTNAP5Q8WYK1 1306 aa10.98□□□□□ -0.65
CHD1-204ENST00000505982 SPATA31C2B4DYI2 1134 aa10.97□□□□□ -0.65
CHD1-204ENST00000505982 MX2P20592 715 aa10.97□□□□□ -0.65
CHD1-204ENST00000505982 TIMMDC1Q9NPL8 285 aa10.97□□□□□ -0.65
CHD1-204ENST00000505982 LRRC4BQ9NT99 713 aa10.97□□□□□ -0.65
CHD1-204ENST00000505982 NR1H3Q13133 447 aa10.96□□□□□ -0.65
CHD1-204ENST00000505982 ACDQ96AP0 544 aa10.96□□□□□ -0.65
CHD1-204ENST00000505982 SERPINA10Q9UK55 444 aa10.96□□□□□ -0.65
CHD1-204ENST00000505982 F11P03951 625 aa10.95□□□□□ -0.66
CHD1-204ENST00000505982 TAS1R3Q7RTX0 852 aa10.95□□□□□ -0.66
CHD1-204ENST00000505982 NUCKS1Q9H1E3 243 aaKnown RBP10.95□□□□□ -0.66
CHD1-204ENST00000505982 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
CHD1-204ENST00000505982 PCDHB11Q9Y5F2 797 aa10.95□□□□□ -0.66
CHD1-204ENST00000505982 SOCS7O14512 581 aa10.94□□□□□ -0.66
CHD1-204ENST00000505982 MSTNO14793 375 aa10.94□□□□□ -0.66
CHD1-204ENST00000505982 SCTRP47872 440 aa10.94□□□□□ -0.66
CHD1-204ENST00000505982 DCAF5Q96JK2 942 aa10.94□□□□□ -0.66
CHD1-204ENST00000505982 ARHGEF10LQ9HCE6 1279 aa10.94□□□□□ -0.66
CHD1-204ENST00000505982 WASLO00401 505 aaPredicted RBP10.93□□□□□ -0.66
CHD1-204ENST00000505982 PLA2G4EQ3MJ16 856 aa10.93□□□□□ -0.66
CHD1-204ENST00000505982 OSBPL3Q9H4L5 887 aa10.93□□□□□ -0.66
CHD1-204ENST00000505982 GNRH1P01148 92 aa10.91□□□□□ -0.66
CHD1-204ENST00000505982 NDUFB9Q9Y6M9 179 aa10.91□□□□□ -0.66
CHD1-204ENST00000505982 OIP5O43482 229 aa10.9□□□□□ -0.66
CHD1-204ENST00000505982 MAP2K3P46734 347 aa10.9□□□□□ -0.66
CHD1-204ENST00000505982 CFHR5Q9BXR6 569 aa10.9□□□□□ -0.66
CHD1-204ENST00000505982 CNKSR1Q969H4 720 aa10.89□□□□□ -0.67
CHD1-204ENST00000505982 CALR3Q96L12 384 aaKnown RBP10.89□□□□□ -0.67
CHD1-204ENST00000505982 ESYT1Q9BSJ8 1104 aa10.89□□□□□ -0.67
CHD1-204ENST00000505982 SPOCK3Q9BQ16 436 aa10.88□□□□□ -0.67
CHD1-204ENST00000505982 OXCT2Q9BYC2 517 aaPredicted RBP10.88□□□□□ -0.67
CHD1-204ENST00000505982 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
CHD1-204ENST00000505982 PHF24Q9UPV7 400 aa10.88□□□□□ -0.67
CHD1-204ENST00000505982 MYCP01106 439 aaPredicted RBP10.87□□□□□ -0.67
CHD1-204ENST00000505982 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
CHD1-204ENST00000505982 GTF2E1P29083 439 aaPredicted RBP10.87□□□□□ -0.67
CHD1-204ENST00000505982 CENPCQ03188 943 aa10.87□□□□□ -0.67
CHD1-204ENST00000505982 ZSCAN10Q96SZ4 725 aaPredicted RBP10.86□□□□□ -0.67
CHD1-204ENST00000505982 A0A1B0GTH6 734 aa10.85□□□□□ -0.67
CHD1-204ENST00000505982 POM121CA8CG34 1229 aa10.85□□□□□ -0.67
CHD1-204ENST00000505982 GALNT6Q8NCL4 622 aa10.85□□□□□ -0.67
CHD1-204ENST00000505982 GLMNQ92990 594 aa10.85□□□□□ -0.67
CHD1-204ENST00000505982 GPAMQ9HCL2 828 aa10.85□□□□□ -0.67
CHD1-204ENST00000505982 IL2RAP01589 272 aa10.84□□□□□ -0.67
CHD1-204ENST00000505982 PHKA2P46019 1235 aa10.84□□□□□ -0.67
CHD1-204ENST00000505982 LBRQ14739 615 aaKnown RBP10.84□□□□□ -0.67
CHD1-204ENST00000505982 PODXL2Q9NZ53 605 aa10.84□□□□□ -0.67
CHD1-204ENST00000505982 ADAM23O75077 832 aa10.83□□□□□ -0.68
CHD1-204ENST00000505982 ITGB2P05107 769 aa10.83□□□□□ -0.68
CHD1-204ENST00000505982 GNASQ5JWF2 1037 aa10.83□□□□□ -0.68
CHD1-204ENST00000505982 GDF2Q9UK05 429 aaPredicted RBP10.83□□□□□ -0.68
CHD1-204ENST00000505982 CSB-PGBD3P0DP91 1061 aa10.82□□□□□ -0.68
CHD1-204ENST00000505982 WASHC4Q2M389 1173 aa10.82□□□□□ -0.68
CHD1-204ENST00000505982 TMEM214Q6NUQ4 689 aaKnown RBP10.82□□□□□ -0.68
CHD1-204ENST00000505982 PGBD3Q8N328 593 aa10.82□□□□□ -0.68
CHD1-204ENST00000505982 KLRG1Q96E93 195 aa10.82□□□□□ -0.68
CHD1-204ENST00000505982 XAGE2Q96GT9 111 aa10.82□□□□□ -0.68
CHD1-204ENST00000505982 CEP126Q9P2H0 1117 aa10.82□□□□□ -0.68
CHD1-204ENST00000505982 MKL2Q9ULH7 1088 aa10.82□□□□□ -0.68
CHD1-204ENST00000505982 THBS1P07996 1170 aa10.81□□□□□ -0.68
CHD1-204ENST00000505982 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
CHD1-204ENST00000505982 HRH3Q9Y5N1 445 aa10.81□□□□□ -0.68
CHD1-204ENST00000505982 GPR37L1O60883 481 aa10.8□□□□□ -0.68
CHD1-204ENST00000505982 PROCP04070 461 aa10.8□□□□□ -0.68
CHD1-204ENST00000505982 SNRPNP63162 240 aaKnown RBP10.8□□□□□ -0.68
CHD1-204ENST00000505982 TRIM26Q12899 539 aaPredicted RBP10.8□□□□□ -0.68
CHD1-204ENST00000505982 IRF5Q13568 498 aa10.8□□□□□ -0.68
CHD1-204ENST00000505982 CDCA7Q9BWT1 371 aaPredicted RBP10.8□□□□□ -0.68
CHD1-204ENST00000505982 EFHC2Q5JST6 749 aa10.79□□□□□ -0.68
CHD1-204ENST00000505982 ALYREFQ86V81 257 aaKnown RBP10.79□□□□□ -0.68
CHD1-204ENST00000505982 EDARADDQ8WWZ3 215 aa10.79□□□□□ -0.68
CHD1-204ENST00000505982 CCDC85AQ96PX6 553 aaPredicted RBP10.79□□□□□ -0.68
CHD1-204ENST00000505982 RRAGCQ9HB90 399 aa10.79□□□□□ -0.68
CHD1-204ENST00000505982 SHISA8B8ZZ34 492 aa10.78□□□□□ -0.68
CHD1-204ENST00000505982 C4orf17Q53FE4 359 aa10.78□□□□□ -0.68
CHD1-204ENST00000505982 GOLGA6L1Q8N7Z2 621 aa10.78□□□□□ -0.68
CHD1-204ENST00000505982 FHDC1Q9C0D6 1143 aaPredicted RBP10.78□□□□□ -0.68
CHD1-204ENST00000505982 VAC14Q08AM6 782 aa10.77□□□□□ -0.69
CHD1-204ENST00000505982 USP4Q13107 963 aa10.77□□□□□ -0.69
CHD1-204ENST00000505982 HDGFL1Q5TGJ6 251 aa10.77□□□□□ -0.69
CHD1-204ENST00000505982 RUBCNLQ9H714 662 aa10.77□□□□□ -0.69
CHD1-204ENST00000505982 ATXN7L1Q9ULK2 861 aaPredicted RBP10.77□□□□□ -0.69
CHD1-204ENST00000505982 MSX1P28360 303 aa10.76□□□□□ -0.69
CHD1-204ENST00000505982 UBAP2LQ14157 1087 aaKnown RBP10.76□□□□□ -0.69
CHD1-204ENST00000505982 C1orf229Q6ZS94 237 aaPredicted RBP10.76□□□□□ -0.69
CHD1-204ENST00000505982 BMP4P12644 408 aa10.75□□□□□ -0.69
CHD1-204ENST00000505982 RHBDD1Q8TEB9 315 aa10.75□□□□□ -0.69
CHD1-204ENST00000505982 KRBA1A5PL33 1030 aa10.74□□□□□ -0.69
CHD1-204ENST00000505982 AMPD1P23109 780 aa10.74□□□□□ -0.69
CHD1-204ENST00000505982 PIK3R2O00459 728 aa10.73□□□□□ -0.69
CHD1-204ENST00000505982 EIF4G2P78344 907 aaKnown RBP eCLIP10.73□□□□□ -0.69
CHD1-204ENST00000505982 PPARGC1BQ86YN6 1023 aaKnown RBP10.73□□□□□ -0.69
CHD1-204ENST00000505982 DOLKQ9UPQ8 538 aa10.73□□□□□ -0.69
CHD1-204ENST00000505982 ZBTB7CA1YPR0 619 aa10.72□□□□□ -0.69
CHD1-204ENST00000505982 K7ELQ4 463 aaPredicted RBP10.72□□□□□ -0.69
CHD1-204ENST00000505982 FGFR3P22607 806 aa10.72□□□□□ -0.69
CHD1-204ENST00000505982 SIRT1Q96EB6 747 aa10.72□□□□□ -0.69
CHD1-204ENST00000505982 ABHD17AQ96GS6 310 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms