RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 BARGINQ6ZT62 677 aa12.63□□□□□ -0.39
PTPN20-215ENST00000505814 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
PTPN20-215ENST00000505814 CRISPLD2Q9H0B8 497 aa12.63□□□□□ -0.39
PTPN20-215ENST00000505814 BLMP54132 1417 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-215ENST00000505814 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
PTPN20-215ENST00000505814 PDE4AP27815 886 aa12.62□□□□□ -0.39
PTPN20-215ENST00000505814 PBX2P40425 430 aa12.62□□□□□ -0.39
PTPN20-215ENST00000505814 CDCA8Q53HL2 280 aa12.62□□□□□ -0.39
PTPN20-215ENST00000505814 SEPT12Q8IYM1 358 aa12.62□□□□□ -0.39
PTPN20-215ENST00000505814 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
PTPN20-215ENST00000505814 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
PTPN20-215ENST00000505814 HSPA5P11021 654 aaKnown RBP12.61□□□□□ -0.39
PTPN20-215ENST00000505814 BCL9O00512 1426 aa12.61□□□□□ -0.39
PTPN20-215ENST00000505814 RTL1A6NKG5 1358 aa12.6□□□□□ -0.39
PTPN20-215ENST00000505814 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPN20-215ENST00000505814 LSM11P83369 360 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPN20-215ENST00000505814 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
PTPN20-215ENST00000505814 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
PTPN20-215ENST00000505814 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
PTPN20-215ENST00000505814 THRAP3Q9Y2W1 955 aaKnown RBP12.6□□□□□ -0.39
PTPN20-215ENST00000505814 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
PTPN20-215ENST00000505814 NSD3Q9BZ95 1437 aa12.6□□□□□ -0.39
PTPN20-215ENST00000505814 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
PTPN20-215ENST00000505814 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
PTPN20-215ENST00000505814 PTGER2P43116 358 aa12.59□□□□□ -0.39
PTPN20-215ENST00000505814 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
PTPN20-215ENST00000505814 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
PTPN20-215ENST00000505814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPN20-215ENST00000505814 KIF24Q5T7B8 1368 aa12.58□□□□□ -0.4
PTPN20-215ENST00000505814 RREB1Q92766 1687 aa12.58□□□□□ -0.4
PTPN20-215ENST00000505814 FYB1O15117 783 aa12.58□□□□□ -0.4
PTPN20-215ENST00000505814 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
PTPN20-215ENST00000505814 SMG6Q86US8 1419 aaKnown RBP12.58□□□□□ -0.4
PTPN20-215ENST00000505814 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.4
PTPN20-215ENST00000505814 SBF2Q86WG5 1849 aa12.58□□□□□ -0.4
PTPN20-215ENST00000505814 TNS2Q63HR2 1409 aa12.57□□□□□ -0.4
PTPN20-215ENST00000505814 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-215ENST00000505814 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-215ENST00000505814 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
PTPN20-215ENST00000505814 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
PTPN20-215ENST00000505814 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
PTPN20-215ENST00000505814 TCP11L2Q8N4U5 519 aa12.56□□□□□ -0.4
PTPN20-215ENST00000505814 OXER1Q8TDS5 423 aa12.56□□□□□ -0.4
PTPN20-215ENST00000505814 CARD10Q9BWT7 1032 aa12.56□□□□□ -0.4
PTPN20-215ENST00000505814 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
PTPN20-215ENST00000505814 MAP3K19Q56UN5 1328 aa12.55□□□□□ -0.4
PTPN20-215ENST00000505814 RGPD2P0DJD1 1756 aa12.54□□□□□ -0.4
PTPN20-215ENST00000505814 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
PTPN20-215ENST00000505814 IP6K1Q92551 441 aa12.53□□□□□ -0.4
PTPN20-215ENST00000505814 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
PTPN20-215ENST00000505814 CCDC9Q9Y3X0 531 aaKnown RBP12.53□□□□□ -0.4
PTPN20-215ENST00000505814 NHSQ6T4R5 1651 aa12.53□□□□□ -0.4
PTPN20-215ENST00000505814 NSD2O96028 1365 aa12.53□□□□□ -0.4
PTPN20-215ENST00000505814 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
PTPN20-215ENST00000505814 ARHGAP33O14559 1287 aa12.52□□□□□ -0.41
PTPN20-215ENST00000505814 COG3Q96JB2 828 aa12.52□□□□□ -0.41
PTPN20-215ENST00000505814 KIF7Q2M1P5 1343 aa12.52□□□□□ -0.41
PTPN20-215ENST00000505814 INSRP06213 1382 aa12.52□□□□□ -0.41
PTPN20-215ENST00000505814 NUP188Q5SRE5 1749 aa12.51□□□□□ -0.41
PTPN20-215ENST00000505814 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
PTPN20-215ENST00000505814 HOXC9P31274 260 aa12.51□□□□□ -0.41
PTPN20-215ENST00000505814 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
PTPN20-215ENST00000505814 EVA1CP58658 441 aa12.5□□□□□ -0.41
PTPN20-215ENST00000505814 DDX27Q96GQ7 796 aaKnown RBP12.5□□□□□ -0.41
PTPN20-215ENST00000505814 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
PTPN20-215ENST00000505814 GGNBP2Q9H3C7 697 aa12.5□□□□□ -0.41
PTPN20-215ENST00000505814 FLT4P35916 1363 aa12.5□□□□□ -0.41
PTPN20-215ENST00000505814 MEGF6O75095 1541 aa12.49□□□□□ -0.41
PTPN20-215ENST00000505814 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
PTPN20-215ENST00000505814 ANKRD24Q8TF21 1146 aa12.49□□□□□ -0.41
PTPN20-215ENST00000505814 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
PTPN20-215ENST00000505814 PARD3Q8TEW0 1356 aa12.48□□□□□ -0.41
PTPN20-215ENST00000505814 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
PTPN20-215ENST00000505814 FBLN1P23142 703 aa12.48□□□□□ -0.41
PTPN20-215ENST00000505814 YY1P25490 414 aa12.48□□□□□ -0.41
PTPN20-215ENST00000505814 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
PTPN20-215ENST00000505814 NPC1L1Q9UHC9 1359 aa12.47□□□□□ -0.41
PTPN20-215ENST00000505814 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-215ENST00000505814 USP35Q9P2H5 1018 aa12.47□□□□□ -0.41
PTPN20-215ENST00000505814 PAPPAQ13219 1627 aa12.47□□□□□ -0.41
PTPN20-215ENST00000505814 WASHC2AQ641Q2 1341 aa12.46□□□□□ -0.41
PTPN20-215ENST00000505814 PER1O15534 1290 aaPredicted RBP12.46□□□□□ -0.41
PTPN20-215ENST00000505814 FAM182BQ5T319 152 aa12.46□□□□□ -0.41
PTPN20-215ENST00000505814 FAM196AQ6ZSG2 479 aa12.46□□□□□ -0.41
PTPN20-215ENST00000505814 MARCH10Q8NA82 808 aaPredicted RBP12.46□□□□□ -0.41
PTPN20-215ENST00000505814 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
PTPN20-215ENST00000505814 MFSD10Q14728 455 aa12.45□□□□□ -0.42
PTPN20-215ENST00000505814 RRS1Q15050 365 aaKnown RBP12.45□□□□□ -0.42
PTPN20-215ENST00000505814 PANK3Q9H999 370 aa12.45□□□□□ -0.42
PTPN20-215ENST00000505814 ZBTB7CA1YPR0 619 aa12.44□□□□□ -0.42
PTPN20-215ENST00000505814 DDB1Q16531 1140 aa12.44□□□□□ -0.42
PTPN20-215ENST00000505814 DEFB132Q7Z7B7 95 aa12.44□□□□□ -0.42
PTPN20-215ENST00000505814 EMILIN1Q9Y6C2 1016 aa12.44□□□□□ -0.42
PTPN20-215ENST00000505814 DOT1LQ8TEK3 1739 aa12.44□□□□□ -0.42
PTPN20-215ENST00000505814 TOGARAM1Q9Y4F4 1720 aa12.44□□□□□ -0.42
PTPN20-215ENST00000505814 LRP5O75197 1615 aa12.44□□□□□ -0.42
PTPN20-215ENST00000505814 ADGRD1Q6QNK2 874 aa12.43□□□□□ -0.42
PTPN20-215ENST00000505814 CAMKK2Q96RR4 588 aa12.43□□□□□ -0.42
PTPN20-215ENST00000505814 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
PTPN20-215ENST00000505814 BTAF1O14981 1849 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms