RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CALR3Q96L12 384 aaKnown RBP7.32□□□□□ -1.24
HMGB1P29-201ENST00000505659 TFIP11Q9UBB9 837 aaKnown RBP7.32□□□□□ -1.24
HMGB1P29-201ENST00000505659 GTF3C3Q9Y5Q9 886 aa7.32□□□□□ -1.24
HMGB1P29-201ENST00000505659 KRT76Q01546 638 aa7.31□□□□□ -1.24
HMGB1P29-201ENST00000505659 PSME1Q06323 249 aa7.31□□□□□ -1.24
HMGB1P29-201ENST00000505659 TAS1R3Q7RTX0 852 aa7.31□□□□□ -1.24
HMGB1P29-201ENST00000505659 PLEKHM2Q8IWE5 1019 aa7.31□□□□□ -1.24
HMGB1P29-201ENST00000505659 USP3Q9Y6I4 520 aa7.31□□□□□ -1.24
HMGB1P29-201ENST00000505659 CLDN10P78369 228 aa7.3□□□□□ -1.24
HMGB1P29-201ENST00000505659 C4orf17Q53FE4 359 aa7.3□□□□□ -1.24
HMGB1P29-201ENST00000505659 TMEM214Q6NUQ4 689 aaKnown RBP7.3□□□□□ -1.24
HMGB1P29-201ENST00000505659 RIPOR1Q6ZS17 1223 aa7.3□□□□□ -1.24
HMGB1P29-201ENST00000505659 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGB1P29-201ENST00000505659 GAS2L1Q99501 681 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P29-201ENST00000505659 TIMMDC1Q9NPL8 285 aa7.3□□□□□ -1.24
HMGB1P29-201ENST00000505659 MAFBQ9Y5Q3 323 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P29-201ENST00000505659 PALM3A6NDB9 673 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P29-201ENST00000505659 RNFT1Q5M7Z0 435 aa7.29□□□□□ -1.24
HMGB1P29-201ENST00000505659 NANOS1Q8WY41 292 aaKnown RBP7.29□□□□□ -1.24
HMGB1P29-201ENST00000505659 PPP1R12CQ9BZL4 782 aa7.29□□□□□ -1.24
HMGB1P29-201ENST00000505659 GPAMQ9HCL2 828 aa7.29□□□□□ -1.24
HMGB1P29-201ENST00000505659 ZNF358Q9NW07 568 aa7.29□□□□□ -1.24
HMGB1P29-201ENST00000505659 ZBTB7BO15156 539 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 LZTS3O60299 673 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 LORP23490 312 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 SMTNP53814 917 aa7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 GNASQ5JWF2 1037 aa7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 TPCN2Q8NHX9 752 aa7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 ZNF837Q96EG3 531 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 MKRN1Q9UHC7 482 aaKnown RBP7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 DYRK1BQ9Y463 629 aa7.28□□□□□ -1.24
HMGB1P29-201ENST00000505659 GPR25O00155 361 aa7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 THBS1P07996 1170 aa7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 PLA2G4AP47712 749 aa7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 DBN1Q16643 649 aa7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 SV2AQ7L0J3 742 aa7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 OGFOD1Q8N543 542 aa7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 RHBDD1Q8TEB9 315 aa7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 ZNF594Q96JF6 807 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 COL25A1Q9BXS0 654 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 IQSEC3Q9UPP2 1182 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P29-201ENST00000505659 A6NJY4 79 aa7.26□□□□□ -1.25
HMGB1P29-201ENST00000505659 TRIM50Q86XT4 487 aa7.26□□□□□ -1.25
HMGB1P29-201ENST00000505659 ZNF295-AS1Q8N0V1 137 aa7.26□□□□□ -1.25
HMGB1P29-201ENST00000505659 CNTNAP3BQ96NU0 1288 aa7.26□□□□□ -1.25
HMGB1P29-201ENST00000505659 SLC4A9Q96Q91 983 aa7.26□□□□□ -1.25
HMGB1P29-201ENST00000505659 CNTNAP3Q9BZ76 1288 aa7.26□□□□□ -1.25
HMGB1P29-201ENST00000505659 DNAAF2Q9NVR5 837 aaKnown RBP7.26□□□□□ -1.25
HMGB1P29-201ENST00000505659 GTF2E1P29083 439 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 LMOD1P29536 600 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 GAS6Q14393 721 aa7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 MTFR1Q15390 333 aa7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 WDR44Q5JSH3 913 aa7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 TBCELQ5QJ74 424 aa7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 CCDC102BQ68D86 513 aa7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 TRIM22Q8IYM9 498 aa7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 TNS4Q8IZW8 715 aa7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 ZMYND15Q9H091 742 aa7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 RUBCNLQ9H714 662 aa7.25□□□□□ -1.25
HMGB1P29-201ENST00000505659 SFI1A8K8P3 1242 aa7.24□□□□□ -1.25
HMGB1P29-201ENST00000505659 DKK1O94907 266 aa7.24□□□□□ -1.25
HMGB1P29-201ENST00000505659 F11P03951 625 aa7.24□□□□□ -1.25
HMGB1P29-201ENST00000505659 MSX1P28360 303 aa7.24□□□□□ -1.25
HMGB1P29-201ENST00000505659 EPHA4P54764 986 aa7.24□□□□□ -1.25
HMGB1P29-201ENST00000505659 CRTC2Q53ET0 693 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P29-201ENST00000505659 CFAP70Q5T0N1 1121 aa7.24□□□□□ -1.25
HMGB1P29-201ENST00000505659 GTPBP3Q969Y2 492 aaKnown RBP7.24□□□□□ -1.25
HMGB1P29-201ENST00000505659 PARP3Q9Y6F1 533 aa7.24□□□□□ -1.25
HMGB1P29-201ENST00000505659 A0A1B0GTH6 734 aa7.23□□□□□ -1.25
HMGB1P29-201ENST00000505659 RASA1P20936 1047 aa7.23□□□□□ -1.25
HMGB1P29-201ENST00000505659 ATP1A2P50993 1020 aa7.23□□□□□ -1.25
HMGB1P29-201ENST00000505659 INSM1Q01101 510 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P29-201ENST00000505659 KANK4Q5T7N3 995 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P29-201ENST00000505659 SCHIP1Q9P0W5 487 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P29-201ENST00000505659 ARID3CA6NKF2 412 aa7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 CDK2AP1O14519 115 aa7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 LGR5O75473 907 aa7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 ATP4AP20648 1035 aa7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 CDCA8Q53HL2 280 aa7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 SIX5Q8N196 739 aa7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 TSEN2Q8NCE0 465 aaKnown RBP7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 ZDHHC1Q8WTX9 485 aa7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 NIFKQ9BYG3 293 aaKnown RBP7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 NUCKS1Q9H1E3 243 aaKnown RBP7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 CABP1Q9NZU7 370 aa7.22□□□□□ -1.25
HMGB1P29-201ENST00000505659 BACH1O14867 736 aa7.21□□□□□ -1.26
HMGB1P29-201ENST00000505659 RFX1P22670 979 aa7.21□□□□□ -1.26
HMGB1P29-201ENST00000505659 FOXK2Q01167 660 aa7.21□□□□□ -1.26
HMGB1P29-201ENST00000505659 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
HMGB1P29-201ENST00000505659 SLC9A9Q8IVB4 645 aa7.21□□□□□ -1.26
HMGB1P29-201ENST00000505659 LARGE2Q8N3Y3 721 aa7.21□□□□□ -1.26
HMGB1P29-201ENST00000505659 ZSCAN1Q8NBB4 408 aa7.21□□□□□ -1.26
HMGB1P29-201ENST00000505659 AIDAQ96BJ3 306 aa7.21□□□□□ -1.26
HMGB1P29-201ENST00000505659 TSPAN10Q9H1Z9 355 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P29-201ENST00000505659 TXLNAP40222 546 aa7.2□□□□□ -1.26
HMGB1P29-201ENST00000505659 UBAP2LQ14157 1087 aaKnown RBP7.2□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L15C9J2P7 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L10C9JJH3 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L13C9JLJ4 530 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms