RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 KCNQ3O43525 872 aa24.17■■□□□ 1.46
SDHA-206ENST00000505555 SDSP20132 328 aa24.17■■□□□ 1.46
SDHA-206ENST00000505555 CD2BP2O95400 341 aaKnown RBP24.16■■□□□ 1.46
SDHA-206ENST00000505555 PROSER2Q86WR7 435 aaPredicted RBP24.16■■□□□ 1.46
SDHA-206ENST00000505555 FAM208AQ9UK61 1670 aaKnown RBP24.16■■□□□ 1.46
SDHA-206ENST00000505555 MPRIPQ6WCQ1 1025 aa24.16■■□□□ 1.46
SDHA-206ENST00000505555 ARHGEF25Q86VW2 580 aa24.16■■□□□ 1.46
SDHA-206ENST00000505555 PNMA6EA0A0J9YXQ4 647 aa24.15■■□□□ 1.46
SDHA-206ENST00000505555 ZNF530Q6P9A1 599 aaPredicted RBP24.15■■□□□ 1.46
SDHA-206ENST00000505555 CHMP5Q9NZZ3 219 aa24.15■■□□□ 1.46
SDHA-206ENST00000505555 RGPD2P0DJD1 1756 aa24.15■■□□□ 1.46
SDHA-206ENST00000505555 GNAI3P08754 354 aa24.14■■□□□ 1.46
SDHA-206ENST00000505555 EIF4A1P60842 406 aaKnown RBP24.14■■□□□ 1.46
SDHA-206ENST00000505555 SOS1Q07889 1333 aaPredicted RBP24.14■■□□□ 1.46
SDHA-206ENST00000505555 AXIN2Q9Y2T1 843 aa24.13■■□□□ 1.45
SDHA-206ENST00000505555 LRRFIP2Q9Y608 721 aaKnown RBP24.13■■□□□ 1.45
SDHA-206ENST00000505555 HSP90AB1P08238 724 aaKnown RBP24.12■■□□□ 1.45
SDHA-206ENST00000505555 KRT28Q7Z3Y7 464 aa24.12■■□□□ 1.45
SDHA-206ENST00000505555 USP44Q9H0E7 712 aa24.12■■□□□ 1.45
SDHA-206ENST00000505555 PLEKHO1Q53GL0 409 aaPredicted RBP24.12■■□□□ 1.45
SDHA-206ENST00000505555 ANKRD24Q8TF21 1146 aa24.12■■□□□ 1.45
SDHA-206ENST00000505555 ATP8B2P98198 1209 aa24.11■■□□□ 1.45
SDHA-206ENST00000505555 TEFQ10587 303 aa24.11■■□□□ 1.45
SDHA-206ENST00000505555 AKAP4Q5JQC9 854 aa24.11■■□□□ 1.45
SDHA-206ENST00000505555 TSHZ3Q63HK5 1081 aa24.11■■□□□ 1.45
SDHA-206ENST00000505555 BTBD11A6QL63 1104 aa24.1■■□□□ 1.45
SDHA-206ENST00000505555 CHPF2Q9P2E5 772 aa24.1■■□□□ 1.45
SDHA-206ENST00000505555 PDE1AP54750 535 aa24.1■■□□□ 1.45
SDHA-206ENST00000505555 FOXD4L1Q9NU39 408 aa24.1■■□□□ 1.45
SDHA-206ENST00000505555 ANXA1P04083 346 aa24.09■■□□□ 1.45
SDHA-206ENST00000505555 USP26Q9BXU7 913 aa24.09■■□□□ 1.45
SDHA-206ENST00000505555 NCOA3Q9Y6Q9 1424 aa24.09■■□□□ 1.45
SDHA-206ENST00000505555 DDIT3P35638 169 aa24.08■■□□□ 1.45
SDHA-206ENST00000505555 MCM4P33991 863 aa24.08■■□□□ 1.45
SDHA-206ENST00000505555 IL27Q8NEV9 243 aa24.08■■□□□ 1.45
SDHA-206ENST00000505555 UBTFL1P0CB47 393 aaPredicted RBP24.07■■□□□ 1.44
SDHA-206ENST00000505555 LRRCC1Q9C099 1032 aa24.07■■□□□ 1.44
SDHA-206ENST00000505555 PXDNQ92626 1479 aa24.06■■□□□ 1.44
SDHA-206ENST00000505555 RNMTO43148 476 aaKnown RBP24.06■■□□□ 1.44
SDHA-206ENST00000505555 ZC3H6P61129 1189 aaKnown RBP24.06■■□□□ 1.44
SDHA-206ENST00000505555 MED1Q15648 1581 aaPredicted RBP24.06■■□□□ 1.44
SDHA-206ENST00000505555 AMOTQ4VCS5 1084 aa24.06■■□□□ 1.44
SDHA-206ENST00000505555 C1orf141Q5JVX7 400 aa24.06■■□□□ 1.44
SDHA-206ENST00000505555 DDX17Q92841 729 aaKnown RBP24.06■■□□□ 1.44
SDHA-206ENST00000505555 OSBPL3Q9H4L5 887 aa24.06■■□□□ 1.44
SDHA-206ENST00000505555 SLIT3O75094 1523 aa24.06■■□□□ 1.44
SDHA-206ENST00000505555 K7ELQ4 463 aaPredicted RBP24.05■■□□□ 1.44
SDHA-206ENST00000505555 CASC1Q6TDU7 716 aa24.05■■□□□ 1.44
SDHA-206ENST00000505555 C19orf44Q9H6X5 657 aa24.05■■□□□ 1.44
SDHA-206ENST00000505555 PHRF1Q9P1Y6 1649 aaKnown RBP24.05■■□□□ 1.44
SDHA-206ENST00000505555 SRCIN1Q9C0H9 1055 aa24.04■■□□□ 1.44
SDHA-206ENST00000505555 C1orf167Q5SNV9 1468 aa24.04■■□□□ 1.44
SDHA-206ENST00000505555 PI4KAP2A4QPH2 592 aa24.04■■□□□ 1.44
SDHA-206ENST00000505555 HSP90AA1P07900 732 aaKnown RBP24.04■■□□□ 1.44
SDHA-206ENST00000505555 PI4KAP1Q8N8J0 262 aa24.04■■□□□ 1.44
SDHA-206ENST00000505555 CACNA1FO60840 1977 aa24.03■■□□□ 1.44
SDHA-206ENST00000505555 SALL3Q9BXA9 1300 aa24.03■■□□□ 1.44
SDHA-206ENST00000505555 IBTKQ9P2D0 1353 aaPredicted RBP24.03■■□□□ 1.44
SDHA-206ENST00000505555 PXDNLA1KZ92 1463 aa24.02■■□□□ 1.44
SDHA-206ENST00000505555 HOXB7P09629 217 aa24.02■■□□□ 1.44
SDHA-206ENST00000505555 NBPF7P0C2Y1 421 aaPredicted RBP24.02■■□□□ 1.44
SDHA-206ENST00000505555 PRAMEF22A3QJZ6 481 aa24.01■■□□□ 1.43
SDHA-206ENST00000505555 EIF5BO60841 1220 aaKnown RBP24.01■■□□□ 1.43
SDHA-206ENST00000505555 MX1P20591 662 aa24.01■■□□□ 1.43
SDHA-206ENST00000505555 LMO7Q8WWI1 1683 aa24.01■■□□□ 1.43
SDHA-206ENST00000505555 PPP1R42Q7Z4L9 355 aa24■■□□□ 1.43
SDHA-206ENST00000505555 DNAAF4Q8WXU2 420 aa24■■□□□ 1.43
SDHA-206ENST00000505555 BRPF3Q9ULD4 1205 aa24■■□□□ 1.43
SDHA-206ENST00000505555 KDM3BQ7LBC6 1761 aa24■■□□□ 1.43
SDHA-206ENST00000505555 BEND3Q5T5X7 828 aa24■■□□□ 1.43
SDHA-206ENST00000505555 IL1RAPL2Q9NP60 686 aa24■■□□□ 1.43
SDHA-206ENST00000505555 TRPM3Q9HCF6 1732 aaPredicted RBP23.99■■□□□ 1.43
SDHA-206ENST00000505555 RABEP1Q15276 862 aa23.99■■□□□ 1.43
SDHA-206ENST00000505555 NCAPD2Q15021 1401 aa23.99■■□□□ 1.43
SDHA-206ENST00000505555 SSH3Q8TE77 659 aa23.99■■□□□ 1.43
SDHA-206ENST00000505555 ERC2O15083 957 aa23.98■■□□□ 1.43
SDHA-206ENST00000505555 PROSER3Q2NL68 480 aa23.98■■□□□ 1.43
SDHA-206ENST00000505555 TNPO1Q92973 898 aaKnown RBP23.98■■□□□ 1.43
SDHA-206ENST00000505555 GIGYF1O75420 1035 aaPredicted RBP23.97■■□□□ 1.43
SDHA-206ENST00000505555 SURF6O75683 361 aaKnown RBP23.97■■□□□ 1.43
SDHA-206ENST00000505555 REC8O95072 547 aa23.97■■□□□ 1.43
SDHA-206ENST00000505555 ATF3P18847 181 aa23.97■■□□□ 1.43
SDHA-206ENST00000505555 ADCY9O60503 1353 aa23.96■■□□□ 1.43
SDHA-206ENST00000505555 ERBB3P21860 1342 aa23.96■■□□□ 1.43
SDHA-206ENST00000505555 RILPL2Q969X0 211 aa23.96■■□□□ 1.43
SDHA-206ENST00000505555 GZF1Q9H116 711 aaPredicted RBP23.96■■□□□ 1.43
SDHA-206ENST00000505555 TRIM6-TRIM34B2RNG4 842 aa23.96■■□□□ 1.43
SDHA-206ENST00000505555 SRGAP3O43295 1099 aa23.96■■□□□ 1.43
SDHA-206ENST00000505555 DBF4Q9UBU7 674 aaPredicted RBP23.96■■□□□ 1.43
SDHA-206ENST00000505555 NUTM1Q86Y26 1132 aa23.95■■□□□ 1.42
SDHA-206ENST00000505555 CIZ1Q9ULV3 898 aaPredicted RBP23.95■■□□□ 1.42
SDHA-206ENST00000505555 N4BP2Q86UW6 1770 aaPredicted RBP23.95■■□□□ 1.42
SDHA-206ENST00000505555 POLA2Q14181 598 aa23.95■■□□□ 1.42
SDHA-206ENST00000505555 CABLES1Q8TDN4 633 aa23.95■■□□□ 1.42
SDHA-206ENST00000505555 NLRP2Q9NX02 1062 aa23.95■■□□□ 1.42
SDHA-206ENST00000505555 TMEM94Q12767 1356 aa23.94■■□□□ 1.42
SDHA-206ENST00000505555 TRAK2O60296 914 aa23.94■■□□□ 1.42
SDHA-206ENST00000505555 RAB3GAP1Q15042 981 aa23.94■■□□□ 1.42
SDHA-206ENST00000505555 UNC5CLQ8IV45 518 aa23.94■■□□□ 1.42
SDHA-206ENST00000505555 CHMP4AQ9BY43 222 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms