RNA–Protein interactions for RNA: ENST00000505441.1

GRAMD2B-205, Transcript of GRAM domain containing 2B, humanhuman

TSL 3

Gene GRAMD2B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-205ENST00000505441 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
GRAMD2B-205ENST00000505441 ZNF467Q7Z7K2 595 aaPredicted RBP10.82□□□□□ -0.68
GRAMD2B-205ENST00000505441 SYT17Q9BSW7 474 aa10.82□□□□□ -0.68
GRAMD2B-205ENST00000505441 MEGF6O75095 1541 aa10.82□□□□□ -0.68
GRAMD2B-205ENST00000505441 DOT1LQ8TEK3 1739 aa10.81□□□□□ -0.68
GRAMD2B-205ENST00000505441 NSD2O96028 1365 aa10.81□□□□□ -0.68
GRAMD2B-205ENST00000505441 USP47Q96K76 1375 aa10.81□□□□□ -0.68
GRAMD2B-205ENST00000505441 FYB1O15117 783 aa10.81□□□□□ -0.68
GRAMD2B-205ENST00000505441 KCNQ4P56696 695 aa10.81□□□□□ -0.68
GRAMD2B-205ENST00000505441 SLAIN1Q8ND83 568 aa10.81□□□□□ -0.68
GRAMD2B-205ENST00000505441 SYTL4Q96C24 671 aaPredicted RBP10.81□□□□□ -0.68
GRAMD2B-205ENST00000505441 GGNBP2Q9H3C7 697 aa10.81□□□□□ -0.68
GRAMD2B-205ENST00000505441 RTL1A6NKG5 1358 aa10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 TMF1P82094 1093 aa10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 NBPF6Q5VWK0 638 aa10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 IFNLR1Q8IU57 520 aaPredicted RBP10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 USHBP1Q8N6Y0 703 aa10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 NBPF4Q96M43 638 aa10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 ARXQ96QS3 562 aa10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 OCEL1Q9H607 264 aa10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 CIZ1Q9ULV3 898 aaPredicted RBP10.8□□□□□ -0.68
GRAMD2B-205ENST00000505441 TUBGCP6Q96RT7 1819 aa10.79□□□□□ -0.68
GRAMD2B-205ENST00000505441 SLC27A3Q5K4L6 730 aa10.79□□□□□ -0.68
GRAMD2B-205ENST00000505441 ZCRB1Q8TBF4 217 aaKnown RBP10.79□□□□□ -0.68
GRAMD2B-205ENST00000505441 SPOCK2Q92563 424 aa10.79□□□□□ -0.68
GRAMD2B-205ENST00000505441 PNPLA7Q6ZV29 1317 aa10.79□□□□□ -0.68
GRAMD2B-205ENST00000505441 QSER1Q2KHR3 1735 aa10.78□□□□□ -0.68
GRAMD2B-205ENST00000505441 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
GRAMD2B-205ENST00000505441 UTRNP46939 3433 aa10.78□□□□□ -0.68
GRAMD2B-205ENST00000505441 LY75O60449 1722 aa10.78□□□□□ -0.68
GRAMD2B-205ENST00000505441 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.68
GRAMD2B-205ENST00000505441 HSP90AB2PQ58FF8 381 aa10.77□□□□□ -0.69
GRAMD2B-205ENST00000505441 MAP3K5Q99683 1374 aa10.77□□□□□ -0.69
GRAMD2B-205ENST00000505441 CHRM1P11229 460 aaPredicted RBP10.76□□□□□ -0.69
GRAMD2B-205ENST00000505441 TRIM26Q12899 539 aaPredicted RBP10.76□□□□□ -0.69
GRAMD2B-205ENST00000505441 SLC16A10Q8TF71 515 aa10.76□□□□□ -0.69
GRAMD2B-205ENST00000505441 RAPGEF4Q8WZA2 1011 aa10.76□□□□□ -0.69
GRAMD2B-205ENST00000505441 CARD14Q9BXL6 1004 aa10.76□□□□□ -0.69
GRAMD2B-205ENST00000505441 TFCP2L1Q9NZI6 479 aa10.76□□□□□ -0.69
GRAMD2B-205ENST00000505441 INSRP06213 1382 aa10.76□□□□□ -0.69
GRAMD2B-205ENST00000505441 SMG6Q86US8 1419 aaKnown RBP10.75□□□□□ -0.69
GRAMD2B-205ENST00000505441 COL24A1Q17RW2 1714 aa10.75□□□□□ -0.69
GRAMD2B-205ENST00000505441 TATP17735 454 aaPredicted RBP10.75□□□□□ -0.69
GRAMD2B-205ENST00000505441 ZNF784Q8NCA9 323 aaPredicted RBP10.75□□□□□ -0.69
GRAMD2B-205ENST00000505441 CCNL1Q9UK58 526 aaPredicted RBP10.75□□□□□ -0.69
GRAMD2B-205ENST00000505441 CGNL1Q0VF96 1302 aa10.75□□□□□ -0.69
GRAMD2B-205ENST00000505441 FLT4P35916 1363 aa10.75□□□□□ -0.69
GRAMD2B-205ENST00000505441 NSD3Q9BZ95 1437 aa10.75□□□□□ -0.69
GRAMD2B-205ENST00000505441 PSEN1P49768 467 aa10.74□□□□□ -0.69
GRAMD2B-205ENST00000505441 MKRN3Q13064 507 aaKnown RBP10.74□□□□□ -0.69
GRAMD2B-205ENST00000505441 CDCA8Q53HL2 280 aa10.74□□□□□ -0.69
GRAMD2B-205ENST00000505441 EMILIN1Q9Y6C2 1016 aa10.74□□□□□ -0.69
GRAMD2B-205ENST00000505441 CHD4Q14839 1912 aa10.74□□□□□ -0.69
GRAMD2B-205ENST00000505441 POLD1P28340 1107 aa10.73□□□□□ -0.69
GRAMD2B-205ENST00000505441 CYP27B1O15528 508 aa10.72□□□□□ -0.69
GRAMD2B-205ENST00000505441 GPR162Q16538 588 aa10.72□□□□□ -0.69
GRAMD2B-205ENST00000505441 COL23A1Q86Y22 540 aaPredicted RBP10.72□□□□□ -0.69
GRAMD2B-205ENST00000505441 NLGN2Q8NFZ4 835 aa10.72□□□□□ -0.69
GRAMD2B-205ENST00000505441 PCDH11XQ9BZA7 1347 aa10.72□□□□□ -0.69
GRAMD2B-205ENST00000505441 PCDH11YQ9BZA8 1340 aa10.72□□□□□ -0.69
GRAMD2B-205ENST00000505441 KIF24Q5T7B8 1368 aa10.72□□□□□ -0.69
GRAMD2B-205ENST00000505441 TOGARAM1Q9Y4F4 1720 aa10.72□□□□□ -0.69
GRAMD2B-205ENST00000505441 PPM1GO15355 546 aaPredicted RBP10.71□□□□□ -0.69
GRAMD2B-205ENST00000505441 C5P01031 1676 aa10.71□□□□□ -0.69
GRAMD2B-205ENST00000505441 PCDH10Q9P2E7 1040 aa10.71□□□□□ -0.69
GRAMD2B-205ENST00000505441 TAF1LQ8IZX4 1826 aa10.7□□□□□ -0.7
GRAMD2B-205ENST00000505441 PKD1L3Q7Z443 1732 aa10.7□□□□□ -0.7
GRAMD2B-205ENST00000505441 NCAPD2Q15021 1401 aa10.7□□□□□ -0.7
GRAMD2B-205ENST00000505441 PALLDQ8WX93 1383 aa10.7□□□□□ -0.7
GRAMD2B-205ENST00000505441 MSL1Q68DK7 614 aa10.7□□□□□ -0.7
GRAMD2B-205ENST00000505441 MPRIPQ6WCQ1 1025 aa10.7□□□□□ -0.7
GRAMD2B-205ENST00000505441 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.7□□□□□ -0.7
GRAMD2B-205ENST00000505441 ITGB4P16144 1822 aa10.7□□□□□ -0.7
GRAMD2B-205ENST00000505441 ANKRD26Q9UPS8 1709 aa10.7□□□□□ -0.7
GRAMD2B-205ENST00000505441 MAP2P11137 1827 aaKnown RBP10.68□□□□□ -0.7
GRAMD2B-205ENST00000505441 WASHC2AQ641Q2 1341 aa10.68□□□□□ -0.7
GRAMD2B-205ENST00000505441 PDAP1Q13442 181 aaKnown RBP10.68□□□□□ -0.7
GRAMD2B-205ENST00000505441 AMIGO3Q86WK7 504 aa10.68□□□□□ -0.7
GRAMD2B-205ENST00000505441 PDCD7Q8N8D1 485 aaKnown RBP10.68□□□□□ -0.7
GRAMD2B-205ENST00000505441 PIGBQ92521 554 aa10.68□□□□□ -0.7
GRAMD2B-205ENST00000505441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.68□□□□□ -0.7
GRAMD2B-205ENST00000505441 C4BP0C0L5 1744 aa10.67□□□□□ -0.7
GRAMD2B-205ENST00000505441 GOLGB1Q14789 3259 aaKnown RBP10.67□□□□□ -0.7
GRAMD2B-205ENST00000505441 YBX3P16989 372 aaKnown RBP eCLIP10.67□□□□□ -0.7
GRAMD2B-205ENST00000505441 NKX1-1Q15270 411 aaPredicted RBP10.67□□□□□ -0.7
GRAMD2B-205ENST00000505441 SMIM5Q71RC9 77 aa10.67□□□□□ -0.7
GRAMD2B-205ENST00000505441 EYA1Q99502 592 aa10.67□□□□□ -0.7
GRAMD2B-205ENST00000505441 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
GRAMD2B-205ENST00000505441 POLKQ9UBT6 870 aa10.67□□□□□ -0.7
GRAMD2B-205ENST00000505441 ST18O60284 1047 aa10.66□□□□□ -0.7
GRAMD2B-205ENST00000505441 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
GRAMD2B-205ENST00000505441 TIMELESSQ9UNS1 1208 aa10.66□□□□□ -0.7
GRAMD2B-205ENST00000505441 SPG7Q9UQ90 795 aa10.66□□□□□ -0.7
GRAMD2B-205ENST00000505441 TNNT2P45379 298 aaPredicted RBP10.65□□□□□ -0.7
GRAMD2B-205ENST00000505441 EIF4A2Q14240 407 aaKnown RBP10.65□□□□□ -0.7
GRAMD2B-205ENST00000505441 AK7Q96M32 723 aa10.65□□□□□ -0.7
GRAMD2B-205ENST00000505441 PCGF6Q9BYE7 350 aa10.65□□□□□ -0.7
GRAMD2B-205ENST00000505441 UBR3Q6ZT12 1888 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms