RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 PKD1L3Q7Z443 1732 aa15.22■□□□□ 0.03
UBE2D3-219ENST00000505207 GNPATO15228 680 aa15.21■□□□□ 0.03
UBE2D3-219ENST00000505207 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
UBE2D3-219ENST00000505207 MORC1Q86VD1 984 aa15.21■□□□□ 0.03
UBE2D3-219ENST00000505207 LINC00116Q8NCU8 138 aa15.21■□□□□ 0.03
UBE2D3-219ENST00000505207 ATG3Q9NT62 314 aa15.21■□□□□ 0.03
UBE2D3-219ENST00000505207 MAP2P11137 1827 aaKnown RBP15.21■□□□□ 0.03
UBE2D3-219ENST00000505207 C4BP0C0L5 1744 aa15.2■□□□□ 0.02
UBE2D3-219ENST00000505207 UTRNP46939 3433 aa15.2■□□□□ 0.02
UBE2D3-219ENST00000505207 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
UBE2D3-219ENST00000505207 RTCBQ9Y3I0 505 aaKnown RBP15.2■□□□□ 0.02
UBE2D3-219ENST00000505207 ITGB4P16144 1822 aa15.2■□□□□ 0.02
UBE2D3-219ENST00000505207 IGSF1Q8N6C5 1336 aa15.19■□□□□ 0.02
UBE2D3-219ENST00000505207 C1orf141Q5JVX7 400 aa15.19■□□□□ 0.02
UBE2D3-219ENST00000505207 TRAPPC3LQ5T215 181 aa15.19■□□□□ 0.02
UBE2D3-219ENST00000505207 KNSTRNQ9Y448 316 aa15.19■□□□□ 0.02
UBE2D3-219ENST00000505207 ANKRD26Q9UPS8 1709 aa15.19■□□□□ 0.02
UBE2D3-219ENST00000505207 TAF1LQ8IZX4 1826 aa15.19■□□□□ 0.02
UBE2D3-219ENST00000505207 CABP4P57796 275 aa15.18■□□□□ 0.02
UBE2D3-219ENST00000505207 ITPK1Q13572 414 aa15.18■□□□□ 0.02
UBE2D3-219ENST00000505207 NLGN1Q8N2Q7 840 aa15.18■□□□□ 0.02
UBE2D3-219ENST00000505207 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-219ENST00000505207 MTHFSP49914 203 aa15.17■□□□□ 0.02
UBE2D3-219ENST00000505207 RC3H1Q5TC82 1133 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-219ENST00000505207 ZNF530Q6P9A1 599 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-219ENST00000505207 CCER1Q8TC90 406 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-219ENST00000505207 TOGARAM1Q9Y4F4 1720 aa15.17■□□□□ 0.02
UBE2D3-219ENST00000505207 AMIGO3Q86WK7 504 aa15.16■□□□□ 0.02
UBE2D3-219ENST00000505207 GPBP1L1Q9HC44 474 aaPredicted RBP15.16■□□□□ 0.02
UBE2D3-219ENST00000505207 MMP10P09238 476 aa15.15■□□□□ 0.02
UBE2D3-219ENST00000505207 RFC4P35249 363 aa15.15■□□□□ 0.02
UBE2D3-219ENST00000505207 SMIM5Q71RC9 77 aa15.15■□□□□ 0.02
UBE2D3-219ENST00000505207 TGFB2P61812 414 aa15.14■□□□□ 0.01
UBE2D3-219ENST00000505207 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
UBE2D3-219ENST00000505207 RPS6KA4O75676 772 aa15.13■□□□□ 0.01
UBE2D3-219ENST00000505207 SULT6B1Q6IMI4 303 aa15.13■□□□□ 0.01
UBE2D3-219ENST00000505207 UBR3Q6ZT12 1888 aa15.13■□□□□ 0.01
UBE2D3-219ENST00000505207 ATP10DQ9P241 1426 aa15.12■□□□□ 0.01
UBE2D3-219ENST00000505207 ARHGEF1Q92888 912 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-219ENST00000505207 CCDC87Q9NVE4 849 aa15.12■□□□□ 0.01
UBE2D3-219ENST00000505207 PARP3Q9Y6F1 533 aa15.12■□□□□ 0.01
UBE2D3-219ENST00000505207 KDRP35968 1356 aa15.11■□□□□ 0.01
UBE2D3-219ENST00000505207 PTCD1O75127 700 aaKnown RBP15.1■□□□□ 0.01
UBE2D3-219ENST00000505207 NFATC2IPQ8NCF5 419 aa15.1■□□□□ 0.01
UBE2D3-219ENST00000505207 GOLGB1Q14789 3259 aaKnown RBP15.1■□□□□ 0.01
UBE2D3-219ENST00000505207 AEBP1Q8IUX7 1158 aa15.09■□□□□ 0.01
UBE2D3-219ENST00000505207 SLC4A9Q96Q91 983 aa15.09■□□□□ 0.01
UBE2D3-219ENST00000505207 WWC3Q9ULE0 1092 aa15.09■□□□□ 0.01
UBE2D3-219ENST00000505207 GYS1P13807 737 aa15.08■□□□□ 0
UBE2D3-219ENST00000505207 IL13P35225 146 aa15.08■□□□□ 0
UBE2D3-219ENST00000505207 AKAP4Q5JQC9 854 aa15.08■□□□□ 0
UBE2D3-219ENST00000505207 ZNF526Q8TF50 670 aaPredicted RBP15.08■□□□□ 0
UBE2D3-219ENST00000505207 CRKLP46109 303 aaKnown RBP15.07■□□□□ 0
UBE2D3-219ENST00000505207 BCS1LQ9Y276 419 aa15.07■□□□□ 0
UBE2D3-219ENST00000505207 ADCY9O60503 1353 aa15.07■□□□□ 0
UBE2D3-219ENST00000505207 KDM6AO15550 1401 aaPredicted RBP15.07■□□□□ 0
UBE2D3-219ENST00000505207 ZNF831Q5JPB2 1677 aa15.06■□□□□ 0
UBE2D3-219ENST00000505207 A0A0G2JLW4 131 aa15.06■□□□□ 0
UBE2D3-219ENST00000505207 FCHSD2O94868 740 aa15.05■□□□□ -0
UBE2D3-219ENST00000505207 AMER1Q5JTC6 1135 aaPredicted RBP15.05■□□□□ -0
UBE2D3-219ENST00000505207 ARHGAP27Q6ZUM4 889 aa15.05■□□□□ -0
UBE2D3-219ENST00000505207 ZPR1O75312 459 aa15.04■□□□□ -0
UBE2D3-219ENST00000505207 DPEP1P16444 411 aa15.04■□□□□ -0
UBE2D3-219ENST00000505207 SLC52A2Q9HAB3 445 aa15.04■□□□□ -0
UBE2D3-219ENST00000505207 PXDNLA1KZ92 1463 aa15.03■□□□□ -0
UBE2D3-219ENST00000505207 C10orf71Q711Q0 1435 aa15.03■□□□□ -0
UBE2D3-219ENST00000505207 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
UBE2D3-219ENST00000505207 HSPA6P17066 643 aa15.03■□□□□ -0
UBE2D3-219ENST00000505207 PIM2Q9P1W9 311 aa15.03■□□□□ -0
UBE2D3-219ENST00000505207 CICQ96RK0 1608 aaPredicted RBP15.03■□□□□ -0
UBE2D3-219ENST00000505207 USP42Q9H9J4 1324 aaKnown RBP15.02■□□□□ -0
UBE2D3-219ENST00000505207 KIF7Q2M1P5 1343 aa15.01□□□□□ -0.01
UBE2D3-219ENST00000505207 RNMTO43148 476 aaKnown RBP15.01□□□□□ -0.01
UBE2D3-219ENST00000505207 HMOX1P09601 288 aa15.01□□□□□ -0.01
UBE2D3-219ENST00000505207 DALRD3Q5D0E6 543 aaKnown RBP15.01□□□□□ -0.01
UBE2D3-219ENST00000505207 INTS5Q6P9B9 1019 aaKnown RBP15.01□□□□□ -0.01
UBE2D3-219ENST00000505207 FKBP8Q14318 412 aa15□□□□□ -0.01
UBE2D3-219ENST00000505207 LGR6Q9HBX8 967 aa15□□□□□ -0.01
UBE2D3-219ENST00000505207 SRP68Q9UHB9 627 aaKnown RBP15□□□□□ -0.01
UBE2D3-219ENST00000505207 CC2D1BQ5T0F9 858 aaKnown RBP14.99□□□□□ -0.01
UBE2D3-219ENST00000505207 DNAJC10Q8IXB1 793 aa14.99□□□□□ -0.01
UBE2D3-219ENST00000505207 VSIG10Q8N0Z9 540 aa14.99□□□□□ -0.01
UBE2D3-219ENST00000505207 C4AP0C0L4 1744 aa14.99□□□□□ -0.01
UBE2D3-219ENST00000505207 KIF13BQ9NQT8 1826 aa14.99□□□□□ -0.01
UBE2D3-219ENST00000505207 COL5A3P25940 1745 aaPredicted RBP14.98□□□□□ -0.01
UBE2D3-219ENST00000505207 KIF3CO14782 793 aa14.98□□□□□ -0.01
UBE2D3-219ENST00000505207 PER1O15534 1290 aaPredicted RBP14.98□□□□□ -0.01
UBE2D3-219ENST00000505207 TOMM70O94826 608 aa14.98□□□□□ -0.01
UBE2D3-219ENST00000505207 STARD3NLO95772 234 aa14.98□□□□□ -0.01
UBE2D3-219ENST00000505207 CYP19A1P11511 503 aaPredicted RBP14.98□□□□□ -0.01
UBE2D3-219ENST00000505207 TTC5Q8N0Z6 440 aa14.98□□□□□ -0.01
UBE2D3-219ENST00000505207 KCNA3P22001 575 aa14.97□□□□□ -0.01
UBE2D3-219ENST00000505207 TM4SF1P30408 202 aa14.97□□□□□ -0.01
UBE2D3-219ENST00000505207 SLC39A6Q13433 755 aa14.97□□□□□ -0.01
UBE2D3-219ENST00000505207 MTHFSDQ2M296 383 aaKnown RBP14.97□□□□□ -0.01
UBE2D3-219ENST00000505207 USPL1Q5W0Q7 1092 aa14.97□□□□□ -0.01
UBE2D3-219ENST00000505207 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
UBE2D3-219ENST00000505207 TEX13AQ9BXU3 409 aaPredicted RBP14.97□□□□□ -0.01
UBE2D3-219ENST00000505207 NARFQ9UHQ1 456 aa14.97□□□□□ -0.01
UBE2D3-219ENST00000505207 MYH14Q7Z406 1995 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms