RNA–Protein interactions for RNA: ENST00000505119.1

NEK1-202, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-202ENST00000505119 LORP23490 312 aaPredicted RBP11.31□□□□□ -0.6
NEK1-202ENST00000505119 PLEKHM2Q8IWE5 1019 aa11.31□□□□□ -0.6
NEK1-202ENST00000505119 TRIM22Q8IYM9 498 aa11.31□□□□□ -0.6
NEK1-202ENST00000505119 PCDHGA11Q9Y5H2 935 aa11.31□□□□□ -0.6
NEK1-202ENST00000505119 GTF2IP78347 998 aa11.3□□□□□ -0.6
NEK1-202ENST00000505119 KRT76Q01546 638 aa11.3□□□□□ -0.6
NEK1-202ENST00000505119 RHBDD1Q8TEB9 315 aa11.3□□□□□ -0.6
NEK1-202ENST00000505119 ZNF837Q96EG3 531 aaPredicted RBP11.3□□□□□ -0.6
NEK1-202ENST00000505119 COL25A1Q9BXS0 654 aaPredicted RBP11.3□□□□□ -0.6
NEK1-202ENST00000505119 USP17L3A6NCW0 530 aa11.29□□□□□ -0.6
NEK1-202ENST00000505119 USP17L4A6NCW7 530 aa11.29□□□□□ -0.6
NEK1-202ENST00000505119 ATP9BO43861 1147 aa11.29□□□□□ -0.6
NEK1-202ENST00000505119 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
NEK1-202ENST00000505119 RIPOR1Q6ZS17 1223 aa11.29□□□□□ -0.6
NEK1-202ENST00000505119 TBC1D9Q6ZT07 1266 aa11.29□□□□□ -0.6
NEK1-202ENST00000505119 USP17L1Q7RTZ2 530 aa11.29□□□□□ -0.6
NEK1-202ENST00000505119 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
NEK1-202ENST00000505119 DEPDC4Q8N2C3 294 aa11.29□□□□□ -0.6
NEK1-202ENST00000505119 GAS2L1Q99501 681 aaPredicted RBP11.29□□□□□ -0.6
NEK1-202ENST00000505119 A0A1B0GTH6 734 aa11.28□□□□□ -0.6
NEK1-202ENST00000505119 TMEM229AB2RXF0 380 aa11.28□□□□□ -0.6
NEK1-202ENST00000505119 H7C1W4 665 aa11.28□□□□□ -0.6
NEK1-202ENST00000505119 C4orf17Q53FE4 359 aa11.28□□□□□ -0.6
NEK1-202ENST00000505119 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
NEK1-202ENST00000505119 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
NEK1-202ENST00000505119 F11P03951 625 aa11.27□□□□□ -0.61
NEK1-202ENST00000505119 RNFT1Q5M7Z0 435 aa11.27□□□□□ -0.61
NEK1-202ENST00000505119 TRIM50Q86XT4 487 aa11.27□□□□□ -0.61
NEK1-202ENST00000505119 FAM181BA6NEQ2 426 aa11.26□□□□□ -0.61
NEK1-202ENST00000505119 PHKA2P46019 1235 aa11.26□□□□□ -0.61
NEK1-202ENST00000505119 SMTNP53814 917 aa11.26□□□□□ -0.61
NEK1-202ENST00000505119 PSME1Q06323 249 aa11.26□□□□□ -0.61
NEK1-202ENST00000505119 SLC4A9Q96Q91 983 aa11.26□□□□□ -0.61
NEK1-202ENST00000505119 DBN1Q16643 649 aa11.25□□□□□ -0.61
NEK1-202ENST00000505119 MTFR1Q15390 333 aa11.24□□□□□ -0.61
NEK1-202ENST00000505119 FOXR1Q6PIV2 292 aa11.24□□□□□ -0.61
NEK1-202ENST00000505119 SERTAD1Q9UHV2 236 aa11.24□□□□□ -0.61
NEK1-202ENST00000505119 BACH1O14867 736 aa11.23□□□□□ -0.61
NEK1-202ENST00000505119 ATP1A2P50993 1020 aa11.23□□□□□ -0.61
NEK1-202ENST00000505119 CALR3Q96L12 384 aaKnown RBP11.23□□□□□ -0.61
NEK1-202ENST00000505119 NUCKS1Q9H1E3 243 aaKnown RBP11.23□□□□□ -0.61
NEK1-202ENST00000505119 A6NJY4 79 aa11.22□□□□□ -0.61
NEK1-202ENST00000505119 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
NEK1-202ENST00000505119 GPAMQ9HCL2 828 aa11.22□□□□□ -0.61
NEK1-202ENST00000505119 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
NEK1-202ENST00000505119 GAS6Q14393 721 aa11.21□□□□□ -0.61
NEK1-202ENST00000505119 ZNF358Q9NW07 568 aa11.21□□□□□ -0.61
NEK1-202ENST00000505119 IQSEC3Q9UPP2 1182 aaPredicted RBP11.21□□□□□ -0.61
NEK1-202ENST00000505119 CDK2AP1O14519 115 aa11.2□□□□□ -0.62
NEK1-202ENST00000505119 CLDN10P78369 228 aa11.2□□□□□ -0.62
NEK1-202ENST00000505119 LBRQ14739 615 aaKnown RBP11.2□□□□□ -0.62
NEK1-202ENST00000505119 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEK1-202ENST00000505119 GTPBP3Q969Y2 492 aaKnown RBP11.2□□□□□ -0.62
NEK1-202ENST00000505119 TRERF1Q96PN7 1200 aa11.2□□□□□ -0.62
NEK1-202ENST00000505119 MKRN1Q9UHC7 482 aaKnown RBP11.2□□□□□ -0.62
NEK1-202ENST00000505119 KIAA1024Q9UPX6 916 aa11.2□□□□□ -0.62
NEK1-202ENST00000505119 MAFBQ9Y5Q3 323 aaPredicted RBP11.2□□□□□ -0.62
NEK1-202ENST00000505119 SLURP2P0DP57 97 aa11.19□□□□□ -0.62
NEK1-202ENST00000505119 CSB-PGBD3P0DP91 1061 aa11.19□□□□□ -0.62
NEK1-202ENST00000505119 MSX1P28360 303 aa11.19□□□□□ -0.62
NEK1-202ENST00000505119 ZNF295-AS1Q8N0V1 137 aa11.19□□□□□ -0.62
NEK1-202ENST00000505119 PGBD3Q8N328 593 aa11.19□□□□□ -0.62
NEK1-202ENST00000505119 TPCN2Q8NHX9 752 aa11.19□□□□□ -0.62
NEK1-202ENST00000505119 TFIP11Q9UBB9 837 aaKnown RBP11.19□□□□□ -0.62
NEK1-202ENST00000505119 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
NEK1-202ENST00000505119 GPR25O00155 361 aa11.18□□□□□ -0.62
NEK1-202ENST00000505119 SRSF11Q05519 484 aaKnown RBP11.18□□□□□ -0.62
NEK1-202ENST00000505119 LARGE2Q8N3Y3 721 aa11.18□□□□□ -0.62
NEK1-202ENST00000505119 OGFOD1Q8N543 542 aa11.18□□□□□ -0.62
NEK1-202ENST00000505119 C1orf216Q8TAB5 229 aa11.18□□□□□ -0.62
NEK1-202ENST00000505119 MBIPQ9NS73 344 aa11.18□□□□□ -0.62
NEK1-202ENST00000505119 DNAAF2Q9NVR5 837 aaKnown RBP11.18□□□□□ -0.62
NEK1-202ENST00000505119 USP3Q9Y6I4 520 aa11.18□□□□□ -0.62
NEK1-202ENST00000505119 THBS1P07996 1170 aa11.17□□□□□ -0.62
NEK1-202ENST00000505119 CCDC102BQ68D86 513 aa11.17□□□□□ -0.62
NEK1-202ENST00000505119 PPP1R12CQ9BZL4 782 aa11.17□□□□□ -0.62
NEK1-202ENST00000505119 RUBCNLQ9H714 662 aa11.17□□□□□ -0.62
NEK1-202ENST00000505119 SCHIP1Q9P0W5 487 aaPredicted RBP11.17□□□□□ -0.62
NEK1-202ENST00000505119 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
NEK1-202ENST00000505119 ATP4AP20648 1035 aa11.16□□□□□ -0.62
NEK1-202ENST00000505119 EPHA4P54764 986 aa11.16□□□□□ -0.62
NEK1-202ENST00000505119 EFHC2Q5JST6 749 aa11.16□□□□□ -0.62
NEK1-202ENST00000505119 SIX5Q8N196 739 aa11.16□□□□□ -0.62
NEK1-202ENST00000505119 CRISPLD1Q9H336 500 aa11.16□□□□□ -0.62
NEK1-202ENST00000505119 ADAMTS2O95450 1211 aa11.15□□□□□ -0.62
NEK1-202ENST00000505119 FOXK2Q01167 660 aa11.15□□□□□ -0.62
NEK1-202ENST00000505119 NBPF1Q3BBV0 1214 aa11.15□□□□□ -0.62
NEK1-202ENST00000505119 ZDHHC3Q9NYG2 299 aa11.14□□□□□ -0.63
NEK1-202ENST00000505119 CABP1Q9NZU7 370 aa11.14□□□□□ -0.63
NEK1-202ENST00000505119 M0R2N6 131 aa11.13□□□□□ -0.63
NEK1-202ENST00000505119 ZNF385CQ66K41 422 aaPredicted RBP11.13□□□□□ -0.63
NEK1-202ENST00000505119 AIDAQ96BJ3 306 aa11.13□□□□□ -0.63
NEK1-202ENST00000505119 ZNF594Q96JF6 807 aaPredicted RBP11.13□□□□□ -0.63
NEK1-202ENST00000505119 CFHR5Q9BXR6 569 aa11.13□□□□□ -0.63
NEK1-202ENST00000505119 PHF24Q9UPV7 400 aa11.13□□□□□ -0.63
NEK1-202ENST00000505119 RASA1P20936 1047 aa11.12□□□□□ -0.63
NEK1-202ENST00000505119 UBAP2LQ14157 1087 aaKnown RBP11.12□□□□□ -0.63
NEK1-202ENST00000505119 SLC9A9Q8IVB4 645 aa11.12□□□□□ -0.63
NEK1-202ENST00000505119 SVOPQ8N4V2 548 aa11.12□□□□□ -0.63
NEK1-202ENST00000505119 ZNF777Q9ULD5 760 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms