RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 FAM196AQ6ZSG2 479 aa11.02□□□□□ -0.65
CDC42SE2-208ENST00000505065 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
CDC42SE2-208ENST00000505065 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.65
CDC42SE2-208ENST00000505065 SLC52A2Q9HAB3 445 aa11.02□□□□□ -0.65
CDC42SE2-208ENST00000505065 PLSCR1O15162 318 aa11.02□□□□□ -0.65
CDC42SE2-208ENST00000505065 ILDR2Q71H61 639 aa11.01□□□□□ -0.65
CDC42SE2-208ENST00000505065 WDR63Q8IWG1 891 aa11.01□□□□□ -0.65
CDC42SE2-208ENST00000505065 SOS1Q07889 1333 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE2-208ENST00000505065 CHL1O00533 1208 aa11□□□□□ -0.65
CDC42SE2-208ENST00000505065 BRCA1P38398 1863 aaKnown RBP10.99□□□□□ -0.65
CDC42SE2-208ENST00000505065 WDR43Q15061 677 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDC42SE2-208ENST00000505065 WWC1Q8IX03 1113 aa10.99□□□□□ -0.65
CDC42SE2-208ENST00000505065 AFDNP55196 1824 aaKnown RBP10.99□□□□□ -0.65
CDC42SE2-208ENST00000505065 ZNF530Q6P9A1 599 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE2-208ENST00000505065 LGR6Q9HBX8 967 aa10.99□□□□□ -0.65
CDC42SE2-208ENST00000505065 ZBED9Q6R2W3 1325 aa10.99□□□□□ -0.65
CDC42SE2-208ENST00000505065 U2SURPO15042 1029 aaKnown RBP10.99□□□□□ -0.65
CDC42SE2-208ENST00000505065 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
CDC42SE2-208ENST00000505065 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
CDC42SE2-208ENST00000505065 PIGBQ92521 554 aa10.98□□□□□ -0.65
CDC42SE2-208ENST00000505065 CAMKK2Q96RR4 588 aa10.98□□□□□ -0.65
CDC42SE2-208ENST00000505065 IFT57Q9NWB7 429 aa10.98□□□□□ -0.65
CDC42SE2-208ENST00000505065 DDX60Q8IY21 1712 aaKnown RBP10.98□□□□□ -0.65
CDC42SE2-208ENST00000505065 ZBTB7CA1YPR0 619 aa10.97□□□□□ -0.65
CDC42SE2-208ENST00000505065 ATG3Q9NT62 314 aa10.97□□□□□ -0.65
CDC42SE2-208ENST00000505065 PTF1AQ7RTS3 328 aa10.97□□□□□ -0.65
CDC42SE2-208ENST00000505065 A0A1B0GUL6 1792 aa10.97□□□□□ -0.65
CDC42SE2-208ENST00000505065 LRP10Q7Z4F1 713 aa10.96□□□□□ -0.65
CDC42SE2-208ENST00000505065 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.65
CDC42SE2-208ENST00000505065 UPF1Q92900 1129 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDC42SE2-208ENST00000505065 APAF1O14727 1248 aa10.96□□□□□ -0.66
CDC42SE2-208ENST00000505065 PROM2Q8N271 834 aa10.96□□□□□ -0.66
CDC42SE2-208ENST00000505065 CFAP44Q96MT7 982 aa10.96□□□□□ -0.66
CDC42SE2-208ENST00000505065 RGL2O15211 777 aa10.95□□□□□ -0.66
CDC42SE2-208ENST00000505065 HOXB7P09629 217 aa10.95□□□□□ -0.66
CDC42SE2-208ENST00000505065 RIPK4P57078 832 aa10.95□□□□□ -0.66
CDC42SE2-208ENST00000505065 ANKRD31Q8N7Z5 1873 aa10.95□□□□□ -0.66
CDC42SE2-208ENST00000505065 CCDC146Q8IYE0 955 aa10.94□□□□□ -0.66
CDC42SE2-208ENST00000505065 PLEKHG5O94827 1062 aa10.94□□□□□ -0.66
CDC42SE2-208ENST00000505065 PALLDQ8WX93 1383 aa10.94□□□□□ -0.66
CDC42SE2-208ENST00000505065 KCNQ2O43526 872 aa10.94□□□□□ -0.66
CDC42SE2-208ENST00000505065 C1orf141Q5JVX7 400 aa10.94□□□□□ -0.66
CDC42SE2-208ENST00000505065 SLC27A3Q5K4L6 730 aa10.94□□□□□ -0.66
CDC42SE2-208ENST00000505065 USP35Q9P2H5 1018 aa10.94□□□□□ -0.66
CDC42SE2-208ENST00000505065 CNTNAP4Q9C0A0 1308 aa10.94□□□□□ -0.66
CDC42SE2-208ENST00000505065 BRPF1P55201 1214 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 SLFN5Q08AF3 891 aa10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 TAF7Q15545 349 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 MAPK8IP3Q9UPT6 1336 aa10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 PDE3BQ13370 1112 aa10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 EIF4A1P60842 406 aaKnown RBP10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 SPINK5Q9NQ38 1064 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 MPRIPQ6WCQ1 1025 aa10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 AKT1S1Q96B36 256 aa10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 PXDNLA1KZ92 1463 aa10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 MYH3P11055 1940 aa10.93□□□□□ -0.66
CDC42SE2-208ENST00000505065 LRRC37AA6NMS7 1700 aa10.92□□□□□ -0.66
CDC42SE2-208ENST00000505065 ZNF790Q6PG37 636 aa10.92□□□□□ -0.66
CDC42SE2-208ENST00000505065 MCM10Q7L590 875 aa10.92□□□□□ -0.66
CDC42SE2-208ENST00000505065 PRIM1P49642 420 aaKnown RBP10.91□□□□□ -0.66
CDC42SE2-208ENST00000505065 RC3H1Q5TC82 1133 aaKnown RBP10.91□□□□□ -0.66
CDC42SE2-208ENST00000505065 ERBB4Q15303 1308 aa10.91□□□□□ -0.66
CDC42SE2-208ENST00000505065 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
CDC42SE2-208ENST00000505065 CCDC9Q9Y3X0 531 aaKnown RBP10.91□□□□□ -0.66
CDC42SE2-208ENST00000505065 DUSP27Q5VZP5 1158 aa10.91□□□□□ -0.66
CDC42SE2-208ENST00000505065 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
CDC42SE2-208ENST00000505065 NFATC2IPQ8NCF5 419 aa10.91□□□□□ -0.66
CDC42SE2-208ENST00000505065 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
CDC42SE2-208ENST00000505065 LRRC4BQ9NT99 713 aa10.9□□□□□ -0.66
CDC42SE2-208ENST00000505065 FANCIQ9NVI1 1328 aa10.9□□□□□ -0.66
CDC42SE2-208ENST00000505065 DDX54Q8TDD1 881 aaKnown RBP10.89□□□□□ -0.67
CDC42SE2-208ENST00000505065 COL11A2P13942 1736 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE2-208ENST00000505065 CT47B1P0C2W7 299 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE2-208ENST00000505065 DCTN1Q14203 1278 aa10.89□□□□□ -0.67
CDC42SE2-208ENST00000505065 TMOD3Q9NYL9 352 aa10.89□□□□□ -0.67
CDC42SE2-208ENST00000505065 ASAP1Q9ULH1 1129 aa10.89□□□□□ -0.67
CDC42SE2-208ENST00000505065 PDIA6Q15084 440 aa10.89□□□□□ -0.67
CDC42SE2-208ENST00000505065 RIC1Q4ADV7 1423 aa10.89□□□□□ -0.67
CDC42SE2-208ENST00000505065 GNAI1P63096 354 aa10.88□□□□□ -0.67
CDC42SE2-208ENST00000505065 GIGYF1O75420 1035 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE2-208ENST00000505065 ITPK1Q13572 414 aa10.88□□□□□ -0.67
CDC42SE2-208ENST00000505065 LTBP1Q14766 1721 aa10.88□□□□□ -0.67
CDC42SE2-208ENST00000505065 INTS5Q6P9B9 1019 aaKnown RBP10.88□□□□□ -0.67
CDC42SE2-208ENST00000505065 CYP19A1P11511 503 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE2-208ENST00000505065 CABP4P57796 275 aa10.88□□□□□ -0.67
CDC42SE2-208ENST00000505065 TNRC6CQ9HCJ0 1690 aaKnown RBP10.87□□□□□ -0.67
CDC42SE2-208ENST00000505065 E9PSI1 815 aa10.87□□□□□ -0.67
CDC42SE2-208ENST00000505065 KCNQ3O43525 872 aa10.87□□□□□ -0.67
CDC42SE2-208ENST00000505065 HMGB2P26583 209 aaKnown RBP10.87□□□□□ -0.67
CDC42SE2-208ENST00000505065 FAM9BQ8IZU0 186 aa10.87□□□□□ -0.67
CDC42SE2-208ENST00000505065 ZNF646O15015 1829 aaPredicted RBP10.87□□□□□ -0.67
CDC42SE2-208ENST00000505065 FAM182BQ5T319 152 aa10.87□□□□□ -0.67
CDC42SE2-208ENST00000505065 THUMPD2Q9BTF0 503 aaKnown RBP10.87□□□□□ -0.67
CDC42SE2-208ENST00000505065 ARFGEF1Q9Y6D6 1849 aa10.87□□□□□ -0.67
CDC42SE2-208ENST00000505065 TRIM37O94972 964 aa10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 LINC00116Q8NCU8 138 aa10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 BTBD11A6QL63 1104 aa10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 CNGB1Q14028 1251 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 ZNF428Q96B54 188 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms