RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 PRAG1Q86YV5 1406 aa7.26□□□□□ -1.25
CDH9-203ENST00000505045 TLL1O43897 1013 aa7.25□□□□□ -1.25
CDH9-203ENST00000505045 TMUB1Q9BVT8 246 aa7.25□□□□□ -1.25
CDH9-203ENST00000505045 PIK3C2GO75747 1445 aa7.25□□□□□ -1.25
CDH9-203ENST00000505045 ADGRF5Q8IZF2 1346 aa7.25□□□□□ -1.25
CDH9-203ENST00000505045 DDX11L8A8MPP1 907 aa7.24□□□□□ -1.25
CDH9-203ENST00000505045 GCGRP47871 477 aa7.24□□□□□ -1.25
CDH9-203ENST00000505045 C14orf37Q86TY3 774 aa7.24□□□□□ -1.25
CDH9-203ENST00000505045 RGS17Q9UGC6 210 aaPredicted RBP7.24□□□□□ -1.25
CDH9-203ENST00000505045 SOCS7O14512 581 aa7.24□□□□□ -1.25
CDH9-203ENST00000505045 CCDC102AQ96A19 550 aa7.24□□□□□ -1.25
CDH9-203ENST00000505045 GMPR2Q9P2T1 348 aaKnown RBP7.24□□□□□ -1.25
CDH9-203ENST00000505045 LAMC1P11047 1609 aa7.24□□□□□ -1.25
CDH9-203ENST00000505045 CDC42BPGQ6DT37 1551 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 NR1I2O75469 434 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 RGL3Q3MIN7 710 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 MORN1Q5T089 497 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 BRINP3Q76B58 766 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 SULF1Q8IWU6 871 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 SCUBE3Q8IX30 993 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 RDH13Q8NBN7 331 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 C19orf44Q9H6X5 657 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 NRXN1Q9ULB1 1477 aa7.23□□□□□ -1.25
CDH9-203ENST00000505045 EP400Q96L91 3159 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 ADH1BP00325 375 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 CD46P15529 392 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 GGCXP38435 758 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 PUS10Q3MIT2 529 aaKnown RBP7.22□□□□□ -1.25
CDH9-203ENST00000505045 BARGINQ6ZT62 677 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 DDX17Q92841 729 aaKnown RBP7.22□□□□□ -1.25
CDH9-203ENST00000505045 EMID1Q96A84 441 aaPredicted RBP7.22□□□□□ -1.25
CDH9-203ENST00000505045 KRTAP9-2Q9BYQ4 174 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 MYOM2P54296 1465 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 ZMYND10O75800 440 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 ATF3P18847 181 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 KCTD17Q8N5Z5 321 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 ZSCAN1Q8NBB4 408 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 DACH1Q9UI36 760 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 PLEKHH1Q9ULM0 1364 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 C1orf167Q5SNV9 1468 aa7.22□□□□□ -1.25
CDH9-203ENST00000505045 RGPD8O14715 1765 aaPredicted RBP7.22□□□□□ -1.25
CDH9-203ENST00000505045 FMN2Q9NZ56 1722 aa7.21□□□□□ -1.25
CDH9-203ENST00000505045 TECPR2O15040 1411 aa7.21□□□□□ -1.25
CDH9-203ENST00000505045 RPGRIP1LQ68CZ1 1315 aa7.21□□□□□ -1.25
CDH9-203ENST00000505045 JCADQ9P266 1359 aa7.21□□□□□ -1.26
CDH9-203ENST00000505045 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
CDH9-203ENST00000505045 TERTO14746 1132 aaKnown RBP7.21□□□□□ -1.26
CDH9-203ENST00000505045 FUT2Q10981 343 aa7.21□□□□□ -1.26
CDH9-203ENST00000505045 THAP11Q96EK4 314 aa7.21□□□□□ -1.26
CDH9-203ENST00000505045 ADGRB1O14514 1584 aa7.21□□□□□ -1.26
CDH9-203ENST00000505045 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
CDH9-203ENST00000505045 ATP6V1AP38606 617 aa7.2□□□□□ -1.26
CDH9-203ENST00000505045 ZC3H15Q8WU90 426 aaKnown RBP7.2□□□□□ -1.26
CDH9-203ENST00000505045 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
CDH9-203ENST00000505045 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
CDH9-203ENST00000505045 SLC19A1P41440 591 aa7.2□□□□□ -1.26
CDH9-203ENST00000505045 MDM2Q00987 491 aaPredicted RBP7.2□□□□□ -1.26
CDH9-203ENST00000505045 TMEM132EQ6IEE7 984 aa7.2□□□□□ -1.26
CDH9-203ENST00000505045 POTEAQ6S8J7 498 aa7.2□□□□□ -1.26
CDH9-203ENST00000505045 S1PR4O95977 384 aa7.19□□□□□ -1.26
CDH9-203ENST00000505045 ANKLE1Q8NAG6 615 aa7.19□□□□□ -1.26
CDH9-203ENST00000505045 YTHDC2Q9H6S0 1430 aaKnown RBP7.19□□□□□ -1.26
CDH9-203ENST00000505045 USP32Q8NFA0 1604 aa7.19□□□□□ -1.26
CDH9-203ENST00000505045 LRPPRCP42704 1394 aaKnown RBP7.18□□□□□ -1.26
CDH9-203ENST00000505045 KRTAP1-3Q8IUG1 177 aa7.18□□□□□ -1.26
CDH9-203ENST00000505045 STK26Q9P289 416 aa7.18□□□□□ -1.26
CDH9-203ENST00000505045 SLC27A5Q9Y2P5 690 aa7.18□□□□□ -1.26
CDH9-203ENST00000505045 SALL2Q9Y467 1007 aaPredicted RBP7.18□□□□□ -1.26
CDH9-203ENST00000505045 PNPLA6Q8IY17 1366 aa7.18□□□□□ -1.26
CDH9-203ENST00000505045 ARHGEF28Q8N1W1 1705 aaKnown RBP7.18□□□□□ -1.26
CDH9-203ENST00000505045 SRCAPQ6ZRS2 3230 aa7.18□□□□□ -1.26
CDH9-203ENST00000505045 COL22A1Q8NFW1 1626 aaPredicted RBP7.18□□□□□ -1.26
CDH9-203ENST00000505045 WAPLQ7Z5K2 1190 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 ORAI2Q96SN7 254 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 REPIN1Q9BWE0 567 aaKnown RBP7.17□□□□□ -1.26
CDH9-203ENST00000505045 FAM217BQ9NTX9 383 aaPredicted RBP7.17□□□□□ -1.26
CDH9-203ENST00000505045 PXDNQ92626 1479 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 TNFRSF10AO00220 468 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 PPEF1O14829 653 aaPredicted RBP7.17□□□□□ -1.26
CDH9-203ENST00000505045 SPRYD7Q5W111 196 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 BRICD5Q6PL45 260 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 ZNF598Q86UK7 904 aaKnown RBP7.17□□□□□ -1.26
CDH9-203ENST00000505045 CRIPAKQ8N1N5 446 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 SPSB2Q99619 263 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 GPCPD1Q9NPB8 672 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 ADGRB2O60241 1585 aa7.17□□□□□ -1.26
CDH9-203ENST00000505045 DHX57Q6P158 1386 aaKnown RBP7.16□□□□□ -1.26
CDH9-203ENST00000505045 ABCC11Q96J66 1382 aa7.16□□□□□ -1.26
CDH9-203ENST00000505045 CFAP70Q5T0N1 1121 aa7.16□□□□□ -1.26
CDH9-203ENST00000505045 FAM160A2Q8N612 972 aaPredicted RBP7.16□□□□□ -1.26
CDH9-203ENST00000505045 SLC6A16Q9GZN6 736 aa7.16□□□□□ -1.26
CDH9-203ENST00000505045 ABCA3Q99758 1704 aa7.16□□□□□ -1.26
CDH9-203ENST00000505045 MARF1Q9Y4F3 1742 aaKnown RBP7.16□□□□□ -1.26
CDH9-203ENST00000505045 DLC1Q96QB1 1528 aa7.16□□□□□ -1.26
CDH9-203ENST00000505045 CLCN1P35523 988 aa7.15□□□□□ -1.26
CDH9-203ENST00000505045 SPATA31A6Q5VVP1 1343 aa7.15□□□□□ -1.26
CDH9-203ENST00000505045 KIF1AQ12756 1690 aa7.15□□□□□ -1.26
CDH9-203ENST00000505045 C14orf93Q9H972 538 aaKnown RBP7.15□□□□□ -1.27
CDH9-203ENST00000505045 NUTM2BA6NNL0 878 aaPredicted RBP7.14□□□□□ -1.27
CDH9-203ENST00000505045 NUTM2EB1AL46 878 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms