RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PCDH11XQ9BZA7 1347 aa18.12■□□□□ 0.49
DDX41-204ENST00000504807 PCDH11YQ9BZA8 1340 aa18.12■□□□□ 0.49
DDX41-204ENST00000504807 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
DDX41-204ENST00000504807 ITGB4P16144 1822 aa18.1■□□□□ 0.49
DDX41-204ENST00000504807 CICQ96RK0 1608 aaPredicted RBP18.1■□□□□ 0.49
DDX41-204ENST00000504807 PHF14O94880 888 aa18.1■□□□□ 0.49
DDX41-204ENST00000504807 ARHGAP27Q6ZUM4 889 aa18.1■□□□□ 0.49
DDX41-204ENST00000504807 AMIGO3Q86WK7 504 aa18.1■□□□□ 0.49
DDX41-204ENST00000504807 BCS1LQ9Y276 419 aa18.09■□□□□ 0.49
DDX41-204ENST00000504807 C5P01031 1676 aa18.08■□□□□ 0.48
DDX41-204ENST00000504807 NKX1-1Q15270 411 aaPredicted RBP18.07■□□□□ 0.48
DDX41-204ENST00000504807 AMER1Q5JTC6 1135 aaPredicted RBP18.07■□□□□ 0.48
DDX41-204ENST00000504807 MPRIPQ6WCQ1 1025 aa18.07■□□□□ 0.48
DDX41-204ENST00000504807 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
DDX41-204ENST00000504807 PIGBQ92521 554 aa18.06■□□□□ 0.48
DDX41-204ENST00000504807 AK7Q96M32 723 aa18.06■□□□□ 0.48
DDX41-204ENST00000504807 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
DDX41-204ENST00000504807 PHKG2P15735 406 aa18.05■□□□□ 0.48
DDX41-204ENST00000504807 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
DDX41-204ENST00000504807 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.04■□□□□ 0.48
DDX41-204ENST00000504807 C9orf131Q5VYM1 1079 aa18.04■□□□□ 0.48
DDX41-204ENST00000504807 PXDNLA1KZ92 1463 aa18.03■□□□□ 0.48
DDX41-204ENST00000504807 A0A0G2JLW4 131 aa18.03■□□□□ 0.48
DDX41-204ENST00000504807 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
DDX41-204ENST00000504807 MORC1Q86VD1 984 aa18.03■□□□□ 0.48
DDX41-204ENST00000504807 RRAGCQ9HB90 399 aa18.03■□□□□ 0.48
DDX41-204ENST00000504807 SPG7Q9UQ90 795 aa18.02■□□□□ 0.48
DDX41-204ENST00000504807 KCPQ6ZWJ8 1503 aa18.02■□□□□ 0.47
DDX41-204ENST00000504807 C4BP0C0L5 1744 aa18.01■□□□□ 0.47
DDX41-204ENST00000504807 KDM6AO15550 1401 aaPredicted RBP18.01■□□□□ 0.47
DDX41-204ENST00000504807 SMC1BQ8NDV3 1235 aa18.01■□□□□ 0.47
DDX41-204ENST00000504807 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.01■□□□□ 0.473e-6■■■■□ 26.5
DDX41-204ENST00000504807 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
DDX41-204ENST00000504807 FCHSD2O94868 740 aa18■□□□□ 0.47
DDX41-204ENST00000504807 PCDH10Q9P2E7 1040 aa18■□□□□ 0.47
DDX41-204ENST00000504807 ASAP1Q9ULH1 1129 aa18■□□□□ 0.47
DDX41-204ENST00000504807 MMP10P09238 476 aa17.99■□□□□ 0.47
DDX41-204ENST00000504807 HMGB2P26583 209 aaKnown RBP17.99■□□□□ 0.47
DDX41-204ENST00000504807 IL13P35225 146 aa17.99■□□□□ 0.47
DDX41-204ENST00000504807 KNSTRNQ9Y448 316 aa17.99■□□□□ 0.47
DDX41-204ENST00000504807 PLEKHG2Q9H7P9 1386 aa17.99■□□□□ 0.47
DDX41-204ENST00000504807 ITPK1Q13572 414 aa17.98■□□□□ 0.47
DDX41-204ENST00000504807 IFNL2Q8IZJ0 200 aa17.98■□□□□ 0.47
DDX41-204ENST00000504807 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
DDX41-204ENST00000504807 TGFB2P61812 414 aa17.97■□□□□ 0.47
DDX41-204ENST00000504807 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
DDX41-204ENST00000504807 ATG3Q9NT62 314 aa17.97■□□□□ 0.47
DDX41-204ENST00000504807 KDRP35968 1356 aa17.96■□□□□ 0.47
DDX41-204ENST00000504807 DPEP1P16444 411 aa17.96■□□□□ 0.47
DDX41-204ENST00000504807 SSFA2P28290 1259 aa17.96■□□□□ 0.47
DDX41-204ENST00000504807 RNF181Q9P0P0 153 aa17.96■□□□□ 0.47
DDX41-204ENST00000504807 UBR3Q6ZT12 1888 aa17.96■□□□□ 0.47
DDX41-204ENST00000504807 CC2D1BQ5T0F9 858 aaKnown RBP17.95■□□□□ 0.46
DDX41-204ENST00000504807 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
DDX41-204ENST00000504807 TMOD3Q9NYL9 352 aa17.95■□□□□ 0.46
DDX41-204ENST00000504807 LOC102724428A0A0B4J2F2 783 aa17.94■□□□□ 0.46
DDX41-204ENST00000504807 MTHFSP49914 203 aa17.94■□□□□ 0.46
DDX41-204ENST00000504807 SIK1P57059 783 aa17.94■□□□□ 0.46
DDX41-204ENST00000504807 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
DDX41-204ENST00000504807 C10orf71Q711Q0 1435 aa17.94■□□□□ 0.46
DDX41-204ENST00000504807 COL3A1P02461 1466 aaPredicted RBP17.94■□□□□ 0.46
DDX41-204ENST00000504807 ZNF530Q6P9A1 599 aaPredicted RBP17.93■□□□□ 0.46
DDX41-204ENST00000504807 SMARCC1Q92922 1105 aaPredicted RBP17.93■□□□□ 0.46
DDX41-204ENST00000504807 N4BP2Q86UW6 1770 aaPredicted RBP17.92■□□□□ 0.46
DDX41-204ENST00000504807 GNPATO15228 680 aa17.92■□□□□ 0.46
DDX41-204ENST00000504807 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
DDX41-204ENST00000504807 KIAA1551Q9HCM1 1747 aa17.9■□□□□ 0.46
DDX41-204ENST00000504807 PLEKHO1Q53GL0 409 aaPredicted RBP17.9■□□□□ 0.46
DDX41-204ENST00000504807 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.46
DDX41-204ENST00000504807 HMOX1P09601 288 aa17.89■□□□□ 0.45
DDX41-204ENST00000504807 DCAF5Q96JK2 942 aa17.89■□□□□ 0.45
DDX41-204ENST00000504807 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
DDX41-204ENST00000504807 FOXN1O15353 648 aa17.88■□□□□ 0.45
DDX41-204ENST00000504807 ATP6V1AP38606 617 aa17.88■□□□□ 0.45
DDX41-204ENST00000504807 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
DDX41-204ENST00000504807 MKRN1Q9UHC7 482 aaKnown RBP17.88■□□□□ 0.45
DDX41-204ENST00000504807 ZNF831Q5JPB2 1677 aa17.87■□□□□ 0.45
DDX41-204ENST00000504807 TJP1Q07157 1748 aa17.87■□□□□ 0.45
DDX41-204ENST00000504807 KCNA3P22001 575 aa17.87■□□□□ 0.45
DDX41-204ENST00000504807 AMOTQ4VCS5 1084 aa17.87■□□□□ 0.45
DDX41-204ENST00000504807 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
DDX41-204ENST00000504807 LGR6Q9HBX8 967 aa17.86■□□□□ 0.45
DDX41-204ENST00000504807 NPC1L1Q9UHC9 1359 aa17.86■□□□□ 0.45
DDX41-204ENST00000504807 DALRD3Q5D0E6 543 aaKnown RBP17.85■□□□□ 0.45
DDX41-204ENST00000504807 NFATC2IPQ8NCF5 419 aa17.85■□□□□ 0.45
DDX41-204ENST00000504807 TNRC6CQ9HCJ0 1690 aaKnown RBP17.85■□□□□ 0.45
DDX41-204ENST00000504807 KIF13BQ9NQT8 1826 aa17.85■□□□□ 0.45
DDX41-204ENST00000504807 PIM2Q9P1W9 311 aa17.85■□□□□ 0.45
DDX41-204ENST00000504807 ADAMTS7Q9UKP4 1686 aa17.85■□□□□ 0.45
DDX41-204ENST00000504807 VEGFAP15692 232 aaPredicted RBP17.84■□□□□ 0.45
DDX41-204ENST00000504807 CABP4P57796 275 aa17.84■□□□□ 0.45
DDX41-204ENST00000504807 NLGN1Q8N2Q7 840 aa17.84■□□□□ 0.45
DDX41-204ENST00000504807 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
DDX41-204ENST00000504807 PRDM10Q9NQV6 1147 aa17.84■□□□□ 0.45
DDX41-204ENST00000504807 MRC1P22897 1456 aa17.83■□□□□ 0.45
DDX41-204ENST00000504807 MYH14Q7Z406 1995 aaKnown RBP17.83■□□□□ 0.44
DDX41-204ENST00000504807 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
DDX41-204ENST00000504807 MTHFSDQ2M296 383 aaKnown RBP17.83■□□□□ 0.44
DDX41-204ENST00000504807 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
DDX41-204ENST00000504807 PTCD1O75127 700 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms