RNA–Protein interactions for RNA: ENST00000504722.5

CNGA1-204, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 4

Gene CNGA1, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-204ENST00000504722 C10orf71Q711Q0 1435 aa7.86□□□□□ -1.15
CNGA1-204ENST00000504722 KIF13BQ9NQT8 1826 aa7.85□□□□□ -1.15
CNGA1-204ENST00000504722 MMP10P09238 476 aa7.85□□□□□ -1.15
CNGA1-204ENST00000504722 SSFA2P28290 1259 aa7.85□□□□□ -1.15
CNGA1-204ENST00000504722 REM2Q8IYK8 340 aaPredicted RBP7.85□□□□□ -1.15
CNGA1-204ENST00000504722 MON2Q7Z3U7 1717 aa7.85□□□□□ -1.15
CNGA1-204ENST00000504722 KIAA1551Q9HCM1 1747 aa7.85□□□□□ -1.15
CNGA1-204ENST00000504722 TNRC6CQ9HCJ0 1690 aaKnown RBP7.85□□□□□ -1.15
CNGA1-204ENST00000504722 PKD1L3Q7Z443 1732 aa7.84□□□□□ -1.15
CNGA1-204ENST00000504722 MPRIPQ6WCQ1 1025 aa7.84□□□□□ -1.15
CNGA1-204ENST00000504722 SMARCC1Q92922 1105 aaPredicted RBP7.84□□□□□ -1.15
CNGA1-204ENST00000504722 RNF181Q9P0P0 153 aa7.84□□□□□ -1.15
CNGA1-204ENST00000504722 SSUH2Q9Y2M2 353 aa7.84□□□□□ -1.15
CNGA1-204ENST00000504722 RAB3GAP2Q9H2M9 1393 aa7.84□□□□□ -1.16
CNGA1-204ENST00000504722 MEGF6O75095 1541 aa7.83□□□□□ -1.16
CNGA1-204ENST00000504722 DPEP1P16444 411 aa7.83□□□□□ -1.16
CNGA1-204ENST00000504722 RGPD2P0DJD1 1756 aa7.83□□□□□ -1.16
CNGA1-204ENST00000504722 TNRC18O15417 2968 aaPredicted RBP7.83□□□□□ -1.16
CNGA1-204ENST00000504722 ARFGEF1Q9Y6D6 1849 aa7.82□□□□□ -1.16
CNGA1-204ENST00000504722 CGNL1Q0VF96 1302 aa7.82□□□□□ -1.16
CNGA1-204ENST00000504722 BRCA1P38398 1863 aaKnown RBP7.82□□□□□ -1.16
CNGA1-204ENST00000504722 FAM161AQ3B820 660 aa7.82□□□□□ -1.16
CNGA1-204ENST00000504722 PRDM10Q9NQV6 1147 aa7.82□□□□□ -1.16
CNGA1-204ENST00000504722 CCDC87Q9NVE4 849 aa7.82□□□□□ -1.16
CNGA1-204ENST00000504722 SBNO2Q9Y2G9 1366 aa7.82□□□□□ -1.16
CNGA1-204ENST00000504722 GNPATO15228 680 aa7.81□□□□□ -1.16
CNGA1-204ENST00000504722 FOXN1O15353 648 aa7.81□□□□□ -1.16
CNGA1-204ENST00000504722 VEGFAP15692 232 aaPredicted RBP7.81□□□□□ -1.16
CNGA1-204ENST00000504722 KCNA3P22001 575 aa7.81□□□□□ -1.16
CNGA1-204ENST00000504722 AMPHP49418 695 aa7.81□□□□□ -1.16
CNGA1-204ENST00000504722 NLGN1Q8N2Q7 840 aa7.81□□□□□ -1.16
CNGA1-204ENST00000504722 LINC00116Q8NCU8 138 aa7.81□□□□□ -1.16
CNGA1-204ENST00000504722 RAPGEF4Q8WZA2 1011 aa7.81□□□□□ -1.16
CNGA1-204ENST00000504722 PIM2Q9P1W9 311 aa7.81□□□□□ -1.16
CNGA1-204ENST00000504722 PCDH11XQ9BZA7 1347 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 PCDH11YQ9BZA8 1340 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 ITGB4P16144 1822 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 LOC102724428A0A0B4J2F2 783 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 TATP17735 454 aaPredicted RBP7.8□□□□□ -1.16
CNGA1-204ENST00000504722 HOXC9P31274 260 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 SIK1P57059 783 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 TMF1P82094 1093 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 DALRD3Q5D0E6 543 aaKnown RBP7.8□□□□□ -1.16
CNGA1-204ENST00000504722 NBPF6Q5VWK0 638 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 HDGFL2Q7Z4V5 671 aaPredicted RBP7.8□□□□□ -1.16
CNGA1-204ENST00000504722 DCAF5Q96JK2 942 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 NBPF4Q96M43 638 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 SBF1O95248 1867 aa7.8□□□□□ -1.16
CNGA1-204ENST00000504722 MAP3K19Q56UN5 1328 aa7.79□□□□□ -1.16
CNGA1-204ENST00000504722 EDC4Q6P2E9 1401 aaKnown RBP7.79□□□□□ -1.16
CNGA1-204ENST00000504722 CTCFP49711 727 aaPredicted RBP7.79□□□□□ -1.16
CNGA1-204ENST00000504722 TRAPPC3LQ5T215 181 aa7.79□□□□□ -1.16
CNGA1-204ENST00000504722 USHBP1Q8N6Y0 703 aa7.79□□□□□ -1.16
CNGA1-204ENST00000504722 TMC1Q8TDI8 760 aa7.79□□□□□ -1.16
CNGA1-204ENST00000504722 PIGBQ92521 554 aa7.79□□□□□ -1.16
CNGA1-204ENST00000504722 MKRN1Q9UHC7 482 aaKnown RBP7.79□□□□□ -1.16
CNGA1-204ENST00000504722 PARP3Q9Y6F1 533 aa7.79□□□□□ -1.16
CNGA1-204ENST00000504722 MAP2P11137 1827 aaKnown RBP7.79□□□□□ -1.16
CNGA1-204ENST00000504722 CD163L1Q9NR16 1453 aa7.79□□□□□ -1.16
CNGA1-204ENST00000504722 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
CNGA1-204ENST00000504722 C4AP0C0L4 1744 aa7.78□□□□□ -1.16
CNGA1-204ENST00000504722 GLTPD2A6NH11 291 aa7.78□□□□□ -1.16
CNGA1-204ENST00000504722 MLLT1Q03111 559 aaPredicted RBP7.78□□□□□ -1.16
CNGA1-204ENST00000504722 ITPK1Q13572 414 aa7.78□□□□□ -1.16
CNGA1-204ENST00000504722 AIDAQ96BJ3 306 aa7.78□□□□□ -1.16
CNGA1-204ENST00000504722 CREBZFQ9NS37 354 aa7.78□□□□□ -1.16
CNGA1-204ENST00000504722 RTCBQ9Y3I0 505 aaKnown RBP7.78□□□□□ -1.16
CNGA1-204ENST00000504722 SPDYE4A6NLX3 237 aa7.77□□□□□ -1.17
CNGA1-204ENST00000504722 PITPNM1O00562 1244 aa7.77□□□□□ -1.17
CNGA1-204ENST00000504722 CYP27B1O15528 508 aa7.77□□□□□ -1.17
CNGA1-204ENST00000504722 FBLN1P23142 703 aa7.77□□□□□ -1.17
CNGA1-204ENST00000504722 ATP6V1AP38606 617 aa7.77□□□□□ -1.17
CNGA1-204ENST00000504722 ABHD8Q96I13 439 aa7.77□□□□□ -1.17
CNGA1-204ENST00000504722 COG3Q96JB2 828 aa7.77□□□□□ -1.17
CNGA1-204ENST00000504722 SLC12A5Q9H2X9 1139 aa7.77□□□□□ -1.17
CNGA1-204ENST00000504722 TERF2IPQ9NYB0 399 aa7.77□□□□□ -1.17
CNGA1-204ENST00000504722 GYS1P13807 737 aa7.76□□□□□ -1.17
CNGA1-204ENST00000504722 LMNB1P20700 586 aa7.76□□□□□ -1.17
CNGA1-204ENST00000504722 ARHGEF1Q92888 912 aaKnown RBP7.76□□□□□ -1.17
CNGA1-204ENST00000504722 SMG6Q86US8 1419 aaKnown RBP7.76□□□□□ -1.17
CNGA1-204ENST00000504722 PDE4DIPQ5VU43 2346 aa7.75□□□□□ -1.17
CNGA1-204ENST00000504722 A0A1W2PP64 1363 aa7.75□□□□□ -1.17
CNGA1-204ENST00000504722 RTL1A6NKG5 1358 aa7.75□□□□□ -1.17
CNGA1-204ENST00000504722 CHRNA5P30532 468 aa7.75□□□□□ -1.17
CNGA1-204ENST00000504722 RFC4P35249 363 aa7.75□□□□□ -1.17
CNGA1-204ENST00000504722 LBX1P52954 281 aa7.75□□□□□ -1.17
CNGA1-204ENST00000504722 RASSF7Q02833 373 aa7.75□□□□□ -1.17
CNGA1-204ENST00000504722 NKX1-1Q15270 411 aaPredicted RBP7.75□□□□□ -1.17
CNGA1-204ENST00000504722 TMOD3Q9NYL9 352 aa7.75□□□□□ -1.17
CNGA1-204ENST00000504722 ASAP1Q9ULH1 1129 aa7.75□□□□□ -1.17
CNGA1-204ENST00000504722 KDM6AO15550 1401 aaPredicted RBP7.75□□□□□ -1.17
CNGA1-204ENST00000504722 ROCK2O75116 1388 aaKnown RBP7.74□□□□□ -1.17
CNGA1-204ENST00000504722 CNTNAP1P78357 1384 aa7.74□□□□□ -1.17
CNGA1-204ENST00000504722 RGS19P49795 217 aa7.74□□□□□ -1.17
CNGA1-204ENST00000504722 RC3H1Q5TC82 1133 aaKnown RBP7.74□□□□□ -1.17
CNGA1-204ENST00000504722 CHADLQ6NUI6 762 aa7.74□□□□□ -1.17
CNGA1-204ENST00000504722 DPY19L2Q6NUT2 758 aa7.74□□□□□ -1.17
CNGA1-204ENST00000504722 WBP1LQ9NX94 342 aa7.74□□□□□ -1.17
CNGA1-204ENST00000504722 CCDC88AQ3V6T2 1871 aa7.73□□□□□ -1.17
CNGA1-204ENST00000504722 CCDC85CA6NKD9 419 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms