RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 EFCAB13Q8IY85 973 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 DZIP1LQ8IYY4 767 aaKnown RBP16.1■□□□□ 0.17
SMTN-221ENST00000504335 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 REREQ9P2R6 1566 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 ERBB3P21860 1342 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 AP5Z1O43299 807 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 CDC45O75419 566 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 DNAAF4Q8WXU2 420 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 DDX19BQ9UMR2 479 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
SMTN-221ENST00000504335 ZSCAN25Q6NSZ9 544 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.09■□□□□ 0.17
SMTN-221ENST00000504335 FAM210AQ96ND0 272 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 NBPF3Q9H094 633 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 ZSCAN16Q9H4T2 348 aaPredicted RBP16.09■□□□□ 0.17
SMTN-221ENST00000504335 KDM5DQ9BY66 1539 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 MPHOSPH10O00566 681 aaKnown RBP16.09■□□□□ 0.17
SMTN-221ENST00000504335 SMC2O95347 1197 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 OAS2P29728 719 aaKnown RBP16.09■□□□□ 0.17
SMTN-221ENST00000504335 REXO1L1PQ8IX06 675 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 CHAMP1Q96JM3 812 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 EXOC6BQ9Y2D4 811 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 MRVI1Q9Y6F6 885 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
SMTN-221ENST00000504335 NYAP1Q6ZVC0 841 aa16.08■□□□□ 0.17
SMTN-221ENST00000504335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.08■□□□□ 0.17
SMTN-221ENST00000504335 MKRN1Q9UHC7 482 aaKnown RBP16.08■□□□□ 0.17
SMTN-221ENST00000504335 SYNMO15061 1565 aa16.08■□□□□ 0.16
SMTN-221ENST00000504335 ANKRD50Q9ULJ7 1429 aa16.08■□□□□ 0.16
SMTN-221ENST00000504335 TMEM87AQ8NBN3 555 aa16.08■□□□□ 0.16
SMTN-221ENST00000504335 FUCA2Q9BTY2 467 aa16.08■□□□□ 0.16
SMTN-221ENST00000504335 TOPBP1Q92547 1522 aa16.08■□□□□ 0.16
SMTN-221ENST00000504335 C21orf2O43822 256 aa16.07■□□□□ 0.16
SMTN-221ENST00000504335 ERCC3P19447 782 aa16.07■□□□□ 0.16
SMTN-221ENST00000504335 LMAN1P49257 510 aa16.07■□□□□ 0.16
SMTN-221ENST00000504335 IRX1P78414 480 aaPredicted RBP16.07■□□□□ 0.16
SMTN-221ENST00000504335 LNPKQ9C0E8 428 aa16.07■□□□□ 0.16
SMTN-221ENST00000504335 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
SMTN-221ENST00000504335 NEMFO60524 1076 aa16.07■□□□□ 0.16
SMTN-221ENST00000504335 ATP10AO60312 1499 aa16.06■□□□□ 0.16
SMTN-221ENST00000504335 LRMPQ12912 555 aa16.06■□□□□ 0.16
SMTN-221ENST00000504335 STAG1Q8WVM7 1258 aa16.06■□□□□ 0.16
SMTN-221ENST00000504335 USP26Q9BXU7 913 aa16.06■□□□□ 0.16
SMTN-221ENST00000504335 GADD45BO75293 160 aaPredicted RBP16.06■□□□□ 0.16
SMTN-221ENST00000504335 ERCC6LQ2NKX8 1250 aa16.06■□□□□ 0.16
SMTN-221ENST00000504335 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
SMTN-221ENST00000504335 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
SMTN-221ENST00000504335 SMC1AQ14683 1233 aaKnown RBP16.05■□□□□ 0.16
SMTN-221ENST00000504335 L2HGDHQ9H9P8 463 aa16.05■□□□□ 0.16
SMTN-221ENST00000504335 ADAM21Q9UKJ8 722 aa16.05■□□□□ 0.16
SMTN-221ENST00000504335 ZBTB12Q9Y330 459 aaPredicted RBP16.05■□□□□ 0.16
SMTN-221ENST00000504335 DRC7Q8IY82 874 aa16.05■□□□□ 0.16
SMTN-221ENST00000504335 CCDC141Q6ZP82 1450 aa16.05■□□□□ 0.16
SMTN-221ENST00000504335 SGSM2O43147 1006 aa16.04■□□□□ 0.16
SMTN-221ENST00000504335 FAM107BQ9H098 131 aa16.04■□□□□ 0.16
SMTN-221ENST00000504335 A0A087WUV0 522 aaPredicted RBP16.04■□□□□ 0.16
SMTN-221ENST00000504335 MNAT1P51948 309 aa16.04■□□□□ 0.16
SMTN-221ENST00000504335 ARHGAP29Q52LW3 1261 aa16.04■□□□□ 0.16
SMTN-221ENST00000504335 FOXD4L5Q5VV16 416 aaPredicted RBP16.04■□□□□ 0.16
SMTN-221ENST00000504335 FOXD4L4Q8WXT5 416 aaPredicted RBP16.04■□□□□ 0.16
SMTN-221ENST00000504335 ANKRD33BA6NCL7 494 aa16.03■□□□□ 0.16
SMTN-221ENST00000504335 TADA2BQ86TJ2 420 aa16.03■□□□□ 0.16
SMTN-221ENST00000504335 PSMD1Q99460 953 aa16.03■□□□□ 0.16
SMTN-221ENST00000504335 MCM2P49736 904 aa16.03■□□□□ 0.16
SMTN-221ENST00000504335 BORCS6Q96GS4 357 aa16.03■□□□□ 0.16
SMTN-221ENST00000504335 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
SMTN-221ENST00000504335 NPHP1O15259 732 aa16.02■□□□□ 0.16
SMTN-221ENST00000504335 CTAGE5O15320 804 aa16.02■□□□□ 0.16
SMTN-221ENST00000504335 CCDC192P0DO97 292 aa16.02■□□□□ 0.16
SMTN-221ENST00000504335 CASTP20810 708 aaKnown RBP16.02■□□□□ 0.16
SMTN-221ENST00000504335 ARID4AP29374 1257 aaPredicted RBP16.02■□□□□ 0.16
SMTN-221ENST00000504335 GIMAP7Q8NHV1 300 aa16.02■□□□□ 0.16
SMTN-221ENST00000504335 UBE2HP62256 183 aa16.02■□□□□ 0.15
SMTN-221ENST00000504335 JAKMIP3Q5VZ66 844 aa16.02■□□□□ 0.15
SMTN-221ENST00000504335 FAM200AQ8TCP9 573 aa16.02■□□□□ 0.15
SMTN-221ENST00000504335 ZCCHC17Q9NP64 241 aaKnown RBP16.02■□□□□ 0.15
SMTN-221ENST00000504335 A1CFQ9NQ94 594 aaKnown RBP16.02■□□□□ 0.15
SMTN-221ENST00000504335 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 CASC1Q6TDU7 716 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 ERC1Q8IUD2 1116 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 FMNL3Q8IVF7 1028 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 MIEF2Q96C03 454 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 KCND1Q9NSA2 647 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 TUBB4AP04350 444 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 TMF1P82094 1093 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 DISP3Q9P2K9 1392 aa16.01■□□□□ 0.15
SMTN-221ENST00000504335 ZC3H12AQ5D1E8 599 aaKnown RBP16■□□□□ 0.15
SMTN-221ENST00000504335 WDR63Q8IWG1 891 aa16■□□□□ 0.15
SMTN-221ENST00000504335 INTS4Q96HW7 963 aaKnown RBP16■□□□□ 0.15
SMTN-221ENST00000504335 PAIP2Q9BPZ3 127 aaKnown RBP16■□□□□ 0.15
SMTN-221ENST00000504335 BCL2L13Q9BXK5 485 aa16■□□□□ 0.15
SMTN-221ENST00000504335 AATKQ6ZMQ8 1374 aa16■□□□□ 0.15
SMTN-221ENST00000504335 IPO7O95373 1038 aaKnown RBP16■□□□□ 0.15
SMTN-221ENST00000504335 UBXN4Q92575 508 aa16■□□□□ 0.15
SMTN-221ENST00000504335 DAPK1P53355 1430 aa16■□□□□ 0.15
SMTN-221ENST00000504335 SMARCA5O60264 1052 aaPredicted RBP15.99■□□□□ 0.15
SMTN-221ENST00000504335 CT47B1P0C2W7 299 aaPredicted RBP15.99■□□□□ 0.15
SMTN-221ENST00000504335 CACTINQ8WUQ7 758 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms