RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 HOXB1P14653 301 aaPredicted RBP12.46□□□□□ -0.41
SSBP2-202ENST00000504136 ZNF710Q8N1W2 664 aa12.46□□□□□ -0.41
SSBP2-202ENST00000504136 EVA1CP58658 441 aa12.45□□□□□ -0.42
SSBP2-202ENST00000504136 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
SSBP2-202ENST00000504136 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
SSBP2-202ENST00000504136 BCL9O00512 1426 aa12.45□□□□□ -0.42
SSBP2-202ENST00000504136 NME9Q86XW9 330 aa12.44□□□□□ -0.42
SSBP2-202ENST00000504136 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
SSBP2-202ENST00000504136 PCDHGA4Q9Y5G9 962 aa12.44□□□□□ -0.42
SSBP2-202ENST00000504136 FAM208AQ9UK61 1670 aaKnown RBP12.44□□□□□ -0.42
SSBP2-202ENST00000504136 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
SSBP2-202ENST00000504136 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
SSBP2-202ENST00000504136 TMF1P82094 1093 aa12.43□□□□□ -0.42
SSBP2-202ENST00000504136 TMC1Q8TDI8 760 aa12.43□□□□□ -0.42
SSBP2-202ENST00000504136 PCGF6Q9BYE7 350 aa12.43□□□□□ -0.42
SSBP2-202ENST00000504136 SBF2Q86WG5 1849 aa12.43□□□□□ -0.42
SSBP2-202ENST00000504136 RREB1Q92766 1687 aa12.42□□□□□ -0.42
SSBP2-202ENST00000504136 C11orf95C9JLR9 678 aaPredicted RBP12.42□□□□□ -0.42
SSBP2-202ENST00000504136 ARSIQ5FYB1 569 aa12.42□□□□□ -0.42
SSBP2-202ENST00000504136 FAM196AQ6ZSG2 479 aa12.42□□□□□ -0.42
SSBP2-202ENST00000504136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.42□□□□□ -0.42
SSBP2-202ENST00000504136 CARD10Q9BWT7 1032 aa12.42□□□□□ -0.42
SSBP2-202ENST00000504136 CCDC7Q96M83 1385 aa12.42□□□□□ -0.42
SSBP2-202ENST00000504136 ERBB3P21860 1342 aa12.41□□□□□ -0.42
SSBP2-202ENST00000504136 A0A0G2JS52 829 aa12.41□□□□□ -0.42
SSBP2-202ENST00000504136 MYT1Q01538 1121 aa12.41□□□□□ -0.42
SSBP2-202ENST00000504136 CDCA8Q53HL2 280 aa12.41□□□□□ -0.42
SSBP2-202ENST00000504136 DEFB132Q7Z7B7 95 aa12.41□□□□□ -0.42
SSBP2-202ENST00000504136 KHSRPQ92945 711 aaKnown RBP eCLIP12.41□□□□□ -0.42
SSBP2-202ENST00000504136 CDCA7Q9BWT1 371 aaPredicted RBP12.41□□□□□ -0.42
SSBP2-202ENST00000504136 KIF20BQ96Q89 1820 aa12.41□□□□□ -0.42
SSBP2-202ENST00000504136 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
SSBP2-202ENST00000504136 OVOS2A0A0G2JMS6 1433 aa12.4□□□□□ -0.42
SSBP2-202ENST00000504136 BAG6P46379 1132 aa12.4□□□□□ -0.42
SSBP2-202ENST00000504136 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
SSBP2-202ENST00000504136 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
SSBP2-202ENST00000504136 WDR70Q9NW82 654 aa12.39□□□□□ -0.43
SSBP2-202ENST00000504136 USP35Q9P2H5 1018 aa12.39□□□□□ -0.43
SSBP2-202ENST00000504136 TNS2Q63HR2 1409 aa12.38□□□□□ -0.43
SSBP2-202ENST00000504136 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
SSBP2-202ENST00000504136 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
SSBP2-202ENST00000504136 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
SSBP2-202ENST00000504136 TOM1L2Q6ZVM7 507 aa12.38□□□□□ -0.43
SSBP2-202ENST00000504136 RTL1A6NKG5 1358 aa12.38□□□□□ -0.43
SSBP2-202ENST00000504136 LRP5O75197 1615 aa12.37□□□□□ -0.43
SSBP2-202ENST00000504136 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
SSBP2-202ENST00000504136 E2F4Q16254 413 aa12.37□□□□□ -0.43
SSBP2-202ENST00000504136 KIF24Q5T7B8 1368 aa12.36□□□□□ -0.43
SSBP2-202ENST00000504136 FYB1O15117 783 aa12.36□□□□□ -0.43
SSBP2-202ENST00000504136 IP6K1Q92551 441 aa12.36□□□□□ -0.43
SSBP2-202ENST00000504136 CAMKK2Q96RR4 588 aa12.36□□□□□ -0.43
SSBP2-202ENST00000504136 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
SSBP2-202ENST00000504136 DDB1Q16531 1140 aa12.35□□□□□ -0.43
SSBP2-202ENST00000504136 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
SSBP2-202ENST00000504136 COG3Q96JB2 828 aa12.35□□□□□ -0.43
SSBP2-202ENST00000504136 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
SSBP2-202ENST00000504136 MAP3K19Q56UN5 1328 aa12.35□□□□□ -0.43
SSBP2-202ENST00000504136 TRIM37O94972 964 aa12.34□□□□□ -0.43
SSBP2-202ENST00000504136 NUDT7P0C024 238 aa12.34□□□□□ -0.43
SSBP2-202ENST00000504136 CCER1Q8TC90 406 aaPredicted RBP12.34□□□□□ -0.43
SSBP2-202ENST00000504136 CARD14Q9BXL6 1004 aa12.34□□□□□ -0.43
SSBP2-202ENST00000504136 ARIH1Q9Y4X5 557 aaPredicted RBP12.34□□□□□ -0.43
SSBP2-202ENST00000504136 TBC1D12O60347 775 aa12.33□□□□□ -0.44
SSBP2-202ENST00000504136 EMP3P54852 163 aa12.33□□□□□ -0.44
SSBP2-202ENST00000504136 EN1Q05925 392 aaPredicted RBP12.33□□□□□ -0.44
SSBP2-202ENST00000504136 MARCH10Q8NA82 808 aaPredicted RBP12.33□□□□□ -0.44
SSBP2-202ENST00000504136 ANKRD24Q8TF21 1146 aa12.33□□□□□ -0.44
SSBP2-202ENST00000504136 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
SSBP2-202ENST00000504136 SHANK3Q9BYB0 1731 aa12.32□□□□□ -0.44
SSBP2-202ENST00000504136 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
SSBP2-202ENST00000504136 CSB-PGBD3P0DP91 1061 aa12.32□□□□□ -0.44
SSBP2-202ENST00000504136 HOXC9P31274 260 aa12.32□□□□□ -0.44
SSBP2-202ENST00000504136 EIF4G2P78344 907 aaKnown RBP eCLIP12.32□□□□□ -0.44
SSBP2-202ENST00000504136 RGPD2P0DJD1 1756 aa12.32□□□□□ -0.44
SSBP2-202ENST00000504136 PLSCR1O15162 318 aa12.31□□□□□ -0.44
SSBP2-202ENST00000504136 KCNV2Q8TDN2 545 aa12.31□□□□□ -0.44
SSBP2-202ENST00000504136 INSRP06213 1382 aa12.3□□□□□ -0.44
SSBP2-202ENST00000504136 POTEB3A0JP26 581 aa12.3□□□□□ -0.44
SSBP2-202ENST00000504136 DPYSL4O14531 572 aa12.3□□□□□ -0.44
SSBP2-202ENST00000504136 APBA3O96018 575 aa12.3□□□□□ -0.44
SSBP2-202ENST00000504136 HSPA5P11021 654 aaKnown RBP12.3□□□□□ -0.44
SSBP2-202ENST00000504136 IL2RBP14784 551 aa12.3□□□□□ -0.44
SSBP2-202ENST00000504136 EZH2Q15910 746 aaKnown RBP12.3□□□□□ -0.44
SSBP2-202ENST00000504136 POTEBQ6S5H4 581 aa12.3□□□□□ -0.44
SSBP2-202ENST00000504136 EXOC5O00471 708 aa12.29□□□□□ -0.44
SSBP2-202ENST00000504136 GGNBP2Q9H3C7 697 aa12.29□□□□□ -0.44
SSBP2-202ENST00000504136 FLT4P35916 1363 aa12.29□□□□□ -0.44
SSBP2-202ENST00000504136 FBLN1P23142 703 aa12.28□□□□□ -0.44
SSBP2-202ENST00000504136 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
SSBP2-202ENST00000504136 ANO8Q9HCE9 1232 aaPredicted RBP12.28□□□□□ -0.44
SSBP2-202ENST00000504136 NLRP2Q9NX02 1062 aa12.28□□□□□ -0.44
SSBP2-202ENST00000504136 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
SSBP2-202ENST00000504136 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
SSBP2-202ENST00000504136 EVI5O60447 810 aa12.27□□□□□ -0.45
SSBP2-202ENST00000504136 LHX6Q9UPM6 363 aa12.27□□□□□ -0.45
SSBP2-202ENST00000504136 CGNL1Q0VF96 1302 aa12.27□□□□□ -0.45
SSBP2-202ENST00000504136 BTAF1O14981 1849 aa12.27□□□□□ -0.45
SSBP2-202ENST00000504136 MAP2P11137 1827 aaKnown RBP12.27□□□□□ -0.45
SSBP2-202ENST00000504136 MEGF6O75095 1541 aa12.27□□□□□ -0.45
SSBP2-202ENST00000504136 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms