RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 RRP9O43818 475 aaKnown RBP18.3■□□□□ 0.52
SNF8-203ENST00000504000 TPM2P07951 284 aa18.3■□□□□ 0.52
SNF8-203ENST00000504000 MCCP23508 829 aa18.3■□□□□ 0.52
SNF8-203ENST00000504000 TERF1P54274 439 aa18.3■□□□□ 0.52
SNF8-203ENST00000504000 MTHFSDQ2M296 383 aaKnown RBP18.3■□□□□ 0.52
SNF8-203ENST00000504000 CAVIN1Q6NZI2 390 aaKnown RBP18.3■□□□□ 0.52
SNF8-203ENST00000504000 ZGPATQ8N5A5 531 aaKnown RBP18.3■□□□□ 0.52
SNF8-203ENST00000504000 LRRCC1Q9C099 1032 aa18.3■□□□□ 0.52
SNF8-203ENST00000504000 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
SNF8-203ENST00000504000 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
SNF8-203ENST00000504000 CACNA1FO60840 1977 aa18.29■□□□□ 0.52
SNF8-203ENST00000504000 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
SNF8-203ENST00000504000 MBD3O95983 291 aa18.29■□□□□ 0.52
SNF8-203ENST00000504000 PKP1Q13835 747 aa18.29■□□□□ 0.52
SNF8-203ENST00000504000 ESYT1Q9BSJ8 1104 aa18.29■□□□□ 0.52
SNF8-203ENST00000504000 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
SNF8-203ENST00000504000 AK9Q5TCS8 1911 aa18.29■□□□□ 0.52
SNF8-203ENST00000504000 ATP8B2P98198 1209 aa18.29■□□□□ 0.52
SNF8-203ENST00000504000 CCDC30Q5VVM6 783 aa18.28■□□□□ 0.52
SNF8-203ENST00000504000 G2E3Q7L622 706 aa18.28■□□□□ 0.52
SNF8-203ENST00000504000 TMX3Q96JJ7 454 aa18.28■□□□□ 0.52
SNF8-203ENST00000504000 PRPF40AO75400 957 aaKnown RBP18.27■□□□□ 0.52
SNF8-203ENST00000504000 MX1P20591 662 aa18.27■□□□□ 0.52
SNF8-203ENST00000504000 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.52
SNF8-203ENST00000504000 GPT2Q8TD30 523 aa18.27■□□□□ 0.52
SNF8-203ENST00000504000 TSPOAP1O95153 1857 aa18.26■□□□□ 0.51
SNF8-203ENST00000504000 BRD1O95696 1058 aa18.26■□□□□ 0.51
SNF8-203ENST00000504000 LRSAM1Q6UWE0 723 aa18.26■□□□□ 0.51
SNF8-203ENST00000504000 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
SNF8-203ENST00000504000 APBB1O00213 710 aa18.26■□□□□ 0.51
SNF8-203ENST00000504000 NEK4P51957 841 aa18.26■□□□□ 0.51
SNF8-203ENST00000504000 MLECQ14165 292 aa18.26■□□□□ 0.51
SNF8-203ENST00000504000 SLC4A10Q6U841 1118 aa18.26■□□□□ 0.51
SNF8-203ENST00000504000 FAM208AQ9UK61 1670 aaKnown RBP18.26■□□□□ 0.51
SNF8-203ENST00000504000 OFD1O75665 1012 aa18.25■□□□□ 0.51
SNF8-203ENST00000504000 MSNP26038 577 aaKnown RBP18.25■□□□□ 0.51
SNF8-203ENST00000504000 FLIIQ13045 1269 aa18.25■□□□□ 0.51
SNF8-203ENST00000504000 NOL7Q9UMY1 257 aaKnown RBP18.25■□□□□ 0.51
SNF8-203ENST00000504000 F6X3S4 739 aa18.24■□□□□ 0.51
SNF8-203ENST00000504000 CHMLP26374 656 aa18.24■□□□□ 0.51
SNF8-203ENST00000504000 MCM5P33992 734 aa18.24■□□□□ 0.51
SNF8-203ENST00000504000 RBSNQ9H1K0 784 aa18.24■□□□□ 0.51
SNF8-203ENST00000504000 ZNF500O60304 480 aaPredicted RBP18.24■□□□□ 0.51
SNF8-203ENST00000504000 NCLP19338 710 aaKnown RBP18.24■□□□□ 0.51
SNF8-203ENST00000504000 PRIM1P49642 420 aaKnown RBP18.24■□□□□ 0.51
SNF8-203ENST00000504000 FOXO3O43524 673 aa18.23■□□□□ 0.51
SNF8-203ENST00000504000 MIS18AQ9NYP9 233 aa18.23■□□□□ 0.51
SNF8-203ENST00000504000 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.22■□□□□ 0.51
SNF8-203ENST00000504000 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
SNF8-203ENST00000504000 EYA1Q99502 592 aa18.22■□□□□ 0.51
SNF8-203ENST00000504000 EXOC6BQ9Y2D4 811 aa18.22■□□□□ 0.51
SNF8-203ENST00000504000 GLIPR1L2Q4G1C9 344 aa18.22■□□□□ 0.51
SNF8-203ENST00000504000 CEP170BQ9Y4F5 1589 aaPredicted RBP18.22■□□□□ 0.51
SNF8-203ENST00000504000 RIMS1Q86UR5 1692 aaKnown RBP18.21■□□□□ 0.51
SNF8-203ENST00000504000 GNAT3A8MTJ3 354 aa18.21■□□□□ 0.51
SNF8-203ENST00000504000 RAB11FIP3O75154 756 aa18.21■□□□□ 0.51
SNF8-203ENST00000504000 HSP90AA2PQ14568 343 aaPredicted RBP18.21■□□□□ 0.51
SNF8-203ENST00000504000 TMEM63CQ9P1W3 806 aa18.21■□□□□ 0.51
SNF8-203ENST00000504000 USP54Q70EL1 1684 aa18.21■□□□□ 0.51
SNF8-203ENST00000504000 PLEKHG5O94827 1062 aa18.2■□□□□ 0.5
SNF8-203ENST00000504000 FKBP5Q13451 457 aaPredicted RBP18.2■□□□□ 0.5
SNF8-203ENST00000504000 PNMA6EA0A0J9YXQ4 647 aa18.2■□□□□ 0.5
SNF8-203ENST00000504000 SSH3Q8TE77 659 aa18.2■□□□□ 0.5
SNF8-203ENST00000504000 SYAP1Q96A49 352 aaPredicted RBP18.2■□□□□ 0.5
SNF8-203ENST00000504000 CHMP4AQ9BY43 222 aa18.19■□□□□ 0.5
SNF8-203ENST00000504000 AMPHP49418 695 aa18.18■□□□□ 0.5
SNF8-203ENST00000504000 LTKP29376 864 aa18.18■□□□□ 0.5
SNF8-203ENST00000504000 HSPA4P34932 840 aa18.18■□□□□ 0.5
SNF8-203ENST00000504000 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
SNF8-203ENST00000504000 USP44Q9H0E7 712 aa18.18■□□□□ 0.5
SNF8-203ENST00000504000 ANO2Q9NQ90 1003 aa18.18■□□□□ 0.5
SNF8-203ENST00000504000 PALD1Q9ULE6 856 aa18.18■□□□□ 0.5
SNF8-203ENST00000504000 TBX22Q9Y458 520 aa18.18■□□□□ 0.5
SNF8-203ENST00000504000 PIK3C2AO00443 1686 aa18.17■□□□□ 0.5
SNF8-203ENST00000504000 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
SNF8-203ENST00000504000 KIAA1211Q6ZU35 1233 aa18.17■□□□□ 0.5
SNF8-203ENST00000504000 ANKARQ7Z5J8 1434 aa18.17■□□□□ 0.5
SNF8-203ENST00000504000 NWD1Q149M9 1564 aa18.17■□□□□ 0.5
SNF8-203ENST00000504000 WDR33Q9C0J8 1336 aaKnown RBP18.16■□□□□ 0.5
SNF8-203ENST00000504000 SLIT1O75093 1534 aa18.16■□□□□ 0.5
SNF8-203ENST00000504000 PHF14O94880 888 aa18.16■□□□□ 0.5
SNF8-203ENST00000504000 POLA2Q14181 598 aa18.16■□□□□ 0.5
SNF8-203ENST00000504000 RBM27Q9P2N5 1060 aaKnown RBP18.16■□□□□ 0.5
SNF8-203ENST00000504000 ZKSCAN5Q9Y2L8 839 aa18.16■□□□□ 0.5
SNF8-203ENST00000504000 ARHGAP23Q9P227 1491 aa18.16■□□□□ 0.5
SNF8-203ENST00000504000 TRIM6-TRIM34B2RNG4 842 aa18.16■□□□□ 0.5
SNF8-203ENST00000504000 UBTFL1P0CB47 393 aaPredicted RBP18.16■□□□□ 0.5
SNF8-203ENST00000504000 TMEM87AQ8NBN3 555 aa18.16■□□□□ 0.5
SNF8-203ENST00000504000 RILPL2Q969X0 211 aa18.16■□□□□ 0.5
SNF8-203ENST00000504000 CCDC39Q9UFE4 941 aa18.16■□□□□ 0.5
SNF8-203ENST00000504000 LRRFIP2Q9Y608 721 aaKnown RBP18.16■□□□□ 0.5
SNF8-203ENST00000504000 SYCE3A1L190 88 aa18.15■□□□□ 0.5
SNF8-203ENST00000504000 DIP2AQ14689 1571 aa18.15■□□□□ 0.5
SNF8-203ENST00000504000 CSPP1Q1MSJ5 1256 aa18.15■□□□□ 0.5
SNF8-203ENST00000504000 HOXB7P09629 217 aa18.14■□□□□ 0.49
SNF8-203ENST00000504000 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.14■□□□□ 0.49
SNF8-203ENST00000504000 FAM184AQ8NB25 1140 aa18.14■□□□□ 0.49
SNF8-203ENST00000504000 NGDNQ8NEJ9 315 aaKnown RBP18.14■□□□□ 0.49
SNF8-203ENST00000504000 IL17REQ8NFR9 667 aa18.14■□□□□ 0.49
SNF8-203ENST00000504000 NSFL1CQ9UNZ2 370 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms