RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ERVV-2B6SEH9 535 aa16.22■□□□□ 0.19
MED28-203ENST00000503945 MTHFSP49914 203 aa16.22■□□□□ 0.19
MED28-203ENST00000503945 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
MED28-203ENST00000503945 SULT6B1Q6IMI4 303 aa16.22■□□□□ 0.19
MED28-203ENST00000503945 LINC00116Q8NCU8 138 aa16.22■□□□□ 0.19
MED28-203ENST00000503945 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
MED28-203ENST00000503945 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
MED28-203ENST00000503945 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
MED28-203ENST00000503945 SIK1P57059 783 aa16.21■□□□□ 0.19
MED28-203ENST00000503945 ASAP1Q9ULH1 1129 aa16.21■□□□□ 0.19
MED28-203ENST00000503945 IL13P35225 146 aa16.2■□□□□ 0.18
MED28-203ENST00000503945 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
MED28-203ENST00000503945 C1orf141Q5JVX7 400 aa16.2■□□□□ 0.18
MED28-203ENST00000503945 ZNF530Q6P9A1 599 aaPredicted RBP16.2■□□□□ 0.18
MED28-203ENST00000503945 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
MED28-203ENST00000503945 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
MED28-203ENST00000503945 CABP4P57796 275 aa16.19■□□□□ 0.18
MED28-203ENST00000503945 ITPK1Q13572 414 aa16.19■□□□□ 0.18
MED28-203ENST00000503945 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
MED28-203ENST00000503945 SSFA2P28290 1259 aa16.18■□□□□ 0.18
MED28-203ENST00000503945 CNGB1Q14028 1251 aaPredicted RBP16.18■□□□□ 0.18
MED28-203ENST00000503945 AEBP1Q8IUX7 1158 aa16.18■□□□□ 0.18
MED28-203ENST00000503945 ATG3Q9NT62 314 aa16.18■□□□□ 0.18
MED28-203ENST00000503945 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
MED28-203ENST00000503945 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
MED28-203ENST00000503945 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
MED28-203ENST00000503945 GPBP1L1Q9HC44 474 aaPredicted RBP16.16■□□□□ 0.18
MED28-203ENST00000503945 GNPATO15228 680 aa16.15■□□□□ 0.18
MED28-203ENST00000503945 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
MED28-203ENST00000503945 ZNF526Q8TF50 670 aaPredicted RBP16.15■□□□□ 0.18
MED28-203ENST00000503945 ADCY9O60503 1353 aa16.13■□□□□ 0.17
MED28-203ENST00000503945 HMOX1P09601 288 aa16.13■□□□□ 0.17
MED28-203ENST00000503945 SLC4A9Q96Q91 983 aa16.13■□□□□ 0.17
MED28-203ENST00000503945 MMP10P09238 476 aa16.12■□□□□ 0.17
MED28-203ENST00000503945 AKAP4Q5JQC9 854 aa16.12■□□□□ 0.17
MED28-203ENST00000503945 TRAPPC3LQ5T215 181 aa16.12■□□□□ 0.17
MED28-203ENST00000503945 RTCBQ9Y3I0 505 aaKnown RBP16.11■□□□□ 0.17
MED28-203ENST00000503945 N4BP2Q86UW6 1770 aaPredicted RBP16.1■□□□□ 0.17
MED28-203ENST00000503945 PTCD1O75127 700 aaKnown RBP16.1■□□□□ 0.17
MED28-203ENST00000503945 RC3H1Q5TC82 1133 aaKnown RBP16.1■□□□□ 0.17
MED28-203ENST00000503945 ARHGEF1Q92888 912 aaKnown RBP16.1■□□□□ 0.17
MED28-203ENST00000503945 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
MED28-203ENST00000503945 KDRP35968 1356 aa16.1■□□□□ 0.17
MED28-203ENST00000503945 NPC1L1Q9UHC9 1359 aa16.1■□□□□ 0.17
MED28-203ENST00000503945 U2SURPO15042 1029 aaKnown RBP16.09■□□□□ 0.17
MED28-203ENST00000503945 KIF13BQ9NQT8 1826 aa16.09■□□□□ 0.17
MED28-203ENST00000503945 MYH14Q7Z406 1995 aaKnown RBP16.08■□□□□ 0.16
MED28-203ENST00000503945 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
MED28-203ENST00000503945 TGFB2P61812 414 aa16.08■□□□□ 0.16
MED28-203ENST00000503945 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
MED28-203ENST00000503945 CFAP53Q96M91 514 aa16.08■□□□□ 0.16
MED28-203ENST00000503945 LGR6Q9HBX8 967 aa16.08■□□□□ 0.16
MED28-203ENST00000503945 KIF3CO14782 793 aa16.07■□□□□ 0.16
MED28-203ENST00000503945 RPS6KA4O75676 772 aa16.07■□□□□ 0.16
MED28-203ENST00000503945 HSPA6P17066 643 aa16.07■□□□□ 0.16
MED28-203ENST00000503945 MTHFSDQ2M296 383 aaKnown RBP16.07■□□□□ 0.16
MED28-203ENST00000503945 KIAA1551Q9HCM1 1747 aa16.07■□□□□ 0.16
MED28-203ENST00000503945 RFC4P35249 363 aa16.06■□□□□ 0.16
MED28-203ENST00000503945 IFFO2Q5TF58 517 aa16.06■□□□□ 0.16
MED28-203ENST00000503945 SLC52A2Q9HAB3 445 aa16.06■□□□□ 0.16
MED28-203ENST00000503945 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
MED28-203ENST00000503945 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
MED28-203ENST00000503945 ZNF831Q5JPB2 1677 aa16.05■□□□□ 0.16
MED28-203ENST00000503945 PXDNLA1KZ92 1463 aa16.05■□□□□ 0.16
MED28-203ENST00000503945 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
MED28-203ENST00000503945 GYS1P13807 737 aa16.05■□□□□ 0.16
MED28-203ENST00000503945 ADRA2BP18089 450 aa16.05■□□□□ 0.16
MED28-203ENST00000503945 BCS1LQ9Y276 419 aa16.05■□□□□ 0.16
MED28-203ENST00000503945 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
MED28-203ENST00000503945 CNTNAP4Q9C0A0 1308 aa16.04■□□□□ 0.16
MED28-203ENST00000503945 DPEP1P16444 411 aa16.04■□□□□ 0.16
MED28-203ENST00000503945 ARHGAP27Q6ZUM4 889 aa16.04■□□□□ 0.16
MED28-203ENST00000503945 KDM6AO15550 1401 aaPredicted RBP16.03■□□□□ 0.16
MED28-203ENST00000503945 CCDC87Q9NVE4 849 aa16.03■□□□□ 0.16
MED28-203ENST00000503945 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
MED28-203ENST00000503945 KCNA3P22001 575 aa16.02■□□□□ 0.16
MED28-203ENST00000503945 GAS2L2Q8NHY3 880 aa16.02■□□□□ 0.16
MED28-203ENST00000503945 C4AP0C0L4 1744 aa16.02■□□□□ 0.15
MED28-203ENST00000503945 C10orf71Q711Q0 1435 aa16.02■□□□□ 0.15
MED28-203ENST00000503945 GNAT3A8MTJ3 354 aa16.01■□□□□ 0.15
MED28-203ENST00000503945 FCHSD2O94868 740 aa16.01■□□□□ 0.15
MED28-203ENST00000503945 CRKLP46109 303 aaKnown RBP16.01■□□□□ 0.15
MED28-203ENST00000503945 SLC39A6Q13433 755 aa16.01■□□□□ 0.15
MED28-203ENST00000503945 SRP68Q9UHB9 627 aaKnown RBP16.01■□□□□ 0.15
MED28-203ENST00000503945 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
MED28-203ENST00000503945 PPP2R1AP30153 589 aa16■□□□□ 0.15
MED28-203ENST00000503945 U2AF1L5P0DN76 240 aaPredicted RBP15.99■□□□□ 0.15
MED28-203ENST00000503945 U2AF1Q01081 240 aaKnown RBP eCLIP15.99■□□□□ 0.15
MED28-203ENST00000503945 TEFQ10587 303 aa15.99■□□□□ 0.15
MED28-203ENST00000503945 TTC5Q8N0Z6 440 aa15.99■□□□□ 0.15
MED28-203ENST00000503945 FKBP8Q14318 412 aa15.98■□□□□ 0.15
MED28-203ENST00000503945 INTS5Q6P9B9 1019 aaKnown RBP15.98■□□□□ 0.15
MED28-203ENST00000503945 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
MED28-203ENST00000503945 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
MED28-203ENST00000503945 IL17REQ8NFR9 667 aa15.98■□□□□ 0.15
MED28-203ENST00000503945 SCN11AQ9UI33 1791 aa15.98■□□□□ 0.15
MED28-203ENST00000503945 ARFGEF1Q9Y6D6 1849 aa15.97■□□□□ 0.15
MED28-203ENST00000503945 ZPR1O75312 459 aa15.97■□□□□ 0.15
MED28-203ENST00000503945 PRKAR2BP31323 418 aa15.97■□□□□ 0.15
MED28-203ENST00000503945 PHACTR3Q96KR7 559 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms