RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 DDX10Q13206 875 aaKnown RBP29.49■■■□□ 2.31
CCHCR1-217ENST00000503420 U2AF1L5P0DN76 240 aaPredicted RBP29.48■■■□□ 2.31
CCHCR1-217ENST00000503420 U2AF1Q01081 240 aaKnown RBP eCLIP29.48■■■□□ 2.31
CCHCR1-217ENST00000503420 GAS2L2Q8NHY3 880 aa29.48■■■□□ 2.31
CCHCR1-217ENST00000503420 DCAF8L1A6NGE4 600 aa29.47■■■□□ 2.31
CCHCR1-217ENST00000503420 COL23A1Q86Y22 540 aaPredicted RBP29.47■■■□□ 2.31
CCHCR1-217ENST00000503420 RNMTO43148 476 aaKnown RBP29.46■■■□□ 2.31
CCHCR1-217ENST00000503420 LINC00116Q8NCU8 138 aa29.45■■■□□ 2.31
CCHCR1-217ENST00000503420 ARXQ96QS3 562 aa29.45■■■□□ 2.31
CCHCR1-217ENST00000503420 LGR6Q9HBX8 967 aa29.45■■■□□ 2.31
CCHCR1-217ENST00000503420 ITPK1Q13572 414 aa29.44■■■□□ 2.3
CCHCR1-217ENST00000503420 SLC52A2Q9HAB3 445 aa29.44■■■□□ 2.3
CCHCR1-217ENST00000503420 PRKAR2BP31323 418 aa29.43■■■□□ 2.3
CCHCR1-217ENST00000503420 SGIP1Q9BQI5 828 aa29.43■■■□□ 2.3
CCHCR1-217ENST00000503420 C5P01031 1676 aa29.43■■■□□ 2.3
CCHCR1-217ENST00000503420 PTCD1O75127 700 aaKnown RBP29.42■■■□□ 2.3
CCHCR1-217ENST00000503420 GNAT3A8MTJ3 354 aa29.41■■■□□ 2.3
CCHCR1-217ENST00000503420 FCHSD2O94868 740 aa29.41■■■□□ 2.3
CCHCR1-217ENST00000503420 PHF14O94880 888 aa29.41■■■□□ 2.3
CCHCR1-217ENST00000503420 RALBP1Q15311 655 aa29.41■■■□□ 2.3
CCHCR1-217ENST00000503420 QSER1Q2KHR3 1735 aa29.41■■■□□ 2.3
CCHCR1-217ENST00000503420 RSPH6AQ9H0K4 717 aa29.41■■■□□ 2.3
CCHCR1-217ENST00000503420 GNPATO15228 680 aa29.4■■■□□ 2.3
CCHCR1-217ENST00000503420 SSFA2P28290 1259 aa29.39■■■□□ 2.3
CCHCR1-217ENST00000503420 FHDC1Q9C0D6 1143 aaPredicted RBP29.39■■■□□ 2.3
CCHCR1-217ENST00000503420 C4BP0C0L5 1744 aa29.38■■■□□ 2.29
CCHCR1-217ENST00000503420 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.38■■■□□ 2.29
CCHCR1-217ENST00000503420 NEFMP07197 916 aa29.38■■■□□ 2.29
CCHCR1-217ENST00000503420 TAF1LQ8IZX4 1826 aa29.37■■■□□ 2.29
CCHCR1-217ENST00000503420 SLC4A9Q96Q91 983 aa29.37■■■□□ 2.29
CCHCR1-217ENST00000503420 MAP3K5Q99683 1374 aa29.37■■■□□ 2.29
CCHCR1-217ENST00000503420 TEFQ10587 303 aa29.36■■■□□ 2.29
CCHCR1-217ENST00000503420 PHACTR3Q96KR7 559 aa29.36■■■□□ 2.29
CCHCR1-217ENST00000503420 RTCBQ9Y3I0 505 aaKnown RBP29.36■■■□□ 2.29
CCHCR1-217ENST00000503420 RC3H1Q5TC82 1133 aaKnown RBP29.35■■■□□ 2.29
CCHCR1-217ENST00000503420 MSL1Q68DK7 614 aa29.35■■■□□ 2.29
CCHCR1-217ENST00000503420 KLHL34Q8N239 644 aa29.35■■■□□ 2.29
CCHCR1-217ENST00000503420 SYT17Q9BSW7 474 aa29.35■■■□□ 2.29
CCHCR1-217ENST00000503420 SCN11AQ9UI33 1791 aa29.34■■■□□ 2.29
CCHCR1-217ENST00000503420 TUBGCP6Q96RT7 1819 aa29.34■■■□□ 2.29
CCHCR1-217ENST00000503420 TRAPPC3LQ5T215 181 aa29.33■■■□□ 2.29
CCHCR1-217ENST00000503420 SLC39A6Q13433 755 aa29.32■■■□□ 2.28
CCHCR1-217ENST00000503420 SMIM5Q71RC9 77 aa29.32■■■□□ 2.28
CCHCR1-217ENST00000503420 RTF1Q92541 710 aaKnown RBP29.32■■■□□ 2.28
CCHCR1-217ENST00000503420 CNTNAP4Q9C0A0 1308 aa29.31■■■□□ 2.28
CCHCR1-217ENST00000503420 AMIGO3Q86WK7 504 aa29.31■■■□□ 2.28
CCHCR1-217ENST00000503420 TTC5Q8N0Z6 440 aa29.31■■■□□ 2.28
CCHCR1-217ENST00000503420 IL17REQ8NFR9 667 aa29.31■■■□□ 2.28
CCHCR1-217ENST00000503420 PNNQ9H307 717 aaKnown RBP29.31■■■□□ 2.28
CCHCR1-217ENST00000503420 RPS6KA4O75676 772 aa29.28■■■□□ 2.28
CCHCR1-217ENST00000503420 ADRA2BP18089 450 aa29.28■■■□□ 2.28
CCHCR1-217ENST00000503420 MRC1P22897 1456 aa29.27■■■□□ 2.28
CCHCR1-217ENST00000503420 RFC4P35249 363 aa29.26■■■□□ 2.27
CCHCR1-217ENST00000503420 CRKLP46109 303 aaKnown RBP29.26■■■□□ 2.27
CCHCR1-217ENST00000503420 ZNF831Q5JPB2 1677 aa29.25■■■□□ 2.27
CCHCR1-217ENST00000503420 MYBBP1AQ9BQG0 1328 aaKnown RBP29.24■■■□□ 2.27
CCHCR1-217ENST00000503420 UBR3Q6ZT12 1888 aa29.24■■■□□ 2.27
CCHCR1-217ENST00000503420 DNAJC10Q8IXB1 793 aa29.24■■■□□ 2.27
CCHCR1-217ENST00000503420 HTATSF1O43719 755 aaKnown RBP29.23■■■□□ 2.27
CCHCR1-217ENST00000503420 VSIG10Q8N0Z9 540 aa29.23■■■□□ 2.27
CCHCR1-217ENST00000503420 ARHGEF1Q92888 912 aaKnown RBP29.23■■■□□ 2.27
CCHCR1-217ENST00000503420 BTBD11A6QL63 1104 aa29.21■■■□□ 2.27
CCHCR1-217ENST00000503420 ZNF790Q6PG37 636 aa29.21■■■□□ 2.27
CCHCR1-217ENST00000503420 MAPK8IP3Q9UPT6 1336 aa29.2■■■□□ 2.27
CCHCR1-217ENST00000503420 NLGN1Q8N2Q7 840 aa29.2■■■□□ 2.26
CCHCR1-217ENST00000503420 CCDC87Q9NVE4 849 aa29.2■■■□□ 2.26
CCHCR1-217ENST00000503420 ADAMTS7Q9UKP4 1686 aa29.2■■■□□ 2.26
CCHCR1-217ENST00000503420 CEMIPQ8WUJ3 1361 aa29.19■■■□□ 2.26
CCHCR1-217ENST00000503420 MCM10Q7L590 875 aa29.19■■■□□ 2.26
CCHCR1-217ENST00000503420 COL24A1Q17RW2 1714 aa29.18■■■□□ 2.26
CCHCR1-217ENST00000503420 STARD3NLO95772 234 aa29.18■■■□□ 2.26
CCHCR1-217ENST00000503420 INTS5Q6P9B9 1019 aaKnown RBP29.18■■■□□ 2.26
CCHCR1-217ENST00000503420 TEX13AQ9BXU3 409 aaPredicted RBP29.18■■■□□ 2.26
CCHCR1-217ENST00000503420 VIRMAQ69YN4 1812 aaKnown RBP29.17■■■□□ 2.26
CCHCR1-217ENST00000503420 CYP19A1P11511 503 aaPredicted RBP29.17■■■□□ 2.26
CCHCR1-217ENST00000503420 FMNL2Q96PY5 1086 aa29.17■■■□□ 2.26
CCHCR1-217ENST00000503420 GPR162Q16538 588 aa29.16■■■□□ 2.26
CCHCR1-217ENST00000503420 ZNF496Q96IT1 587 aaPredicted RBP29.16■■■□□ 2.26
CCHCR1-217ENST00000503420 CD2APQ9Y5K6 639 aa29.16■■■□□ 2.26
CCHCR1-217ENST00000503420 PLEKHF1Q96S99 279 aa29.15■■■□□ 2.26
CCHCR1-217ENST00000503420 COL5A3P25940 1745 aaPredicted RBP29.14■■■□□ 2.26
CCHCR1-217ENST00000503420 MMP10P09238 476 aa29.14■■■□□ 2.26
CCHCR1-217ENST00000503420 DCTN1Q14203 1278 aa29.14■■■□□ 2.26
CCHCR1-217ENST00000503420 NFE2L2Q16236 605 aa29.14■■■□□ 2.26
CCHCR1-217ENST00000503420 ZPR1O75312 459 aa29.13■■■□□ 2.25
CCHCR1-217ENST00000503420 PELP1Q8IZL8 1130 aaKnown RBP29.13■■■□□ 2.25
CCHCR1-217ENST00000503420 PRKRIP1Q9H875 184 aaPredicted RBP29.13■■■□□ 2.25
CCHCR1-217ENST00000503420 KCPQ6ZWJ8 1503 aa29.13■■■□□ 2.25
CCHCR1-217ENST00000503420 WDR43Q15061 677 aaKnown RBP eCLIP29.12■■■□□ 2.25
CCHCR1-217ENST00000503420 NLGN2Q8NFZ4 835 aa29.12■■■□□ 2.25
CCHCR1-217ENST00000503420 HEG1Q9ULI3 1381 aa29.12■■■□□ 2.25
CCHCR1-217ENST00000503420 GYS1P13807 737 aa29.11■■■□□ 2.25
CCHCR1-217ENST00000503420 TAF7Q15545 349 aaPredicted RBP29.11■■■□□ 2.25
CCHCR1-217ENST00000503420 MYH14Q7Z406 1995 aaKnown RBP29.11■■■□□ 2.25
CCHCR1-217ENST00000503420 ZNF316A6NFI3 1004 aaPredicted RBP29.1■■■□□ 2.25
CCHCR1-217ENST00000503420 CANXP27824 592 aaKnown RBP29.1■■■□□ 2.25
CCHCR1-217ENST00000503420 TJP1Q07157 1748 aa29.1■■■□□ 2.25
CCHCR1-217ENST00000503420 NPM2Q86SE8 214 aaKnown RBP29.09■■■□□ 2.25
CCHCR1-217ENST00000503420 ZBTB1Q9Y2K1 713 aa29.09■■■□□ 2.25
CCHCR1-217ENST00000503420 PARP3Q9Y6F1 533 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms