RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 PXDNLA1KZ92 1463 aa18.02■□□□□ 0.48
TRIO-205ENST00000503399 CICQ96RK0 1608 aaPredicted RBP18.02■□□□□ 0.48
TRIO-205ENST00000503399 TNNT2P45379 298 aaPredicted RBP18.02■□□□□ 0.48
TRIO-205ENST00000503399 POLR3GLQ9BT43 218 aa18.02■□□□□ 0.48
TRIO-205ENST00000503399 KIF3CO14782 793 aa18.01■□□□□ 0.47
TRIO-205ENST00000503399 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
TRIO-205ENST00000503399 BCS1LQ9Y276 419 aa18.01■□□□□ 0.47
TRIO-205ENST00000503399 RTCBQ9Y3I0 505 aaKnown RBP18.01■□□□□ 0.47
TRIO-205ENST00000503399 N4BP2Q86UW6 1770 aaPredicted RBP18.01■□□□□ 0.47
TRIO-205ENST00000503399 TRAPPC3LQ5T215 181 aa18■□□□□ 0.47
TRIO-205ENST00000503399 POLKQ9UBT6 870 aa18■□□□□ 0.47
TRIO-205ENST00000503399 A0A0G2JLW4 131 aa17.99■□□□□ 0.47
TRIO-205ENST00000503399 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
TRIO-205ENST00000503399 KDRP35968 1356 aa17.99■□□□□ 0.47
TRIO-205ENST00000503399 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
TRIO-205ENST00000503399 KIAA1551Q9HCM1 1747 aa17.98■□□□□ 0.47
TRIO-205ENST00000503399 TGFB2P61812 414 aa17.97■□□□□ 0.47
TRIO-205ENST00000503399 ARHGAP27Q6ZUM4 889 aa17.97■□□□□ 0.47
TRIO-205ENST00000503399 NLGN1Q8N2Q7 840 aa17.97■□□□□ 0.47
TRIO-205ENST00000503399 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
TRIO-205ENST00000503399 C10orf71Q711Q0 1435 aa17.97■□□□□ 0.47
TRIO-205ENST00000503399 RFC4P35249 363 aa17.96■□□□□ 0.47
TRIO-205ENST00000503399 ARHGEF1Q92888 912 aaKnown RBP17.96■□□□□ 0.47
TRIO-205ENST00000503399 SLC4A9Q96Q91 983 aa17.96■□□□□ 0.47
TRIO-205ENST00000503399 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
TRIO-205ENST00000503399 FCHSD2O94868 740 aa17.95■□□□□ 0.46
TRIO-205ENST00000503399 DPEP1P16444 411 aa17.95■□□□□ 0.46
TRIO-205ENST00000503399 PARP3Q9Y6F1 533 aa17.95■□□□□ 0.46
TRIO-205ENST00000503399 ERVV-2B6SEH9 535 aa17.94■□□□□ 0.46
TRIO-205ENST00000503399 HSP90AB1P08238 724 aaKnown RBP17.94■□□□□ 0.46
TRIO-205ENST00000503399 ADRA2BP18089 450 aa17.94■□□□□ 0.46
TRIO-205ENST00000503399 DCAF5Q96JK2 942 aa17.94■□□□□ 0.46
TRIO-205ENST00000503399 COL5A3P25940 1745 aaPredicted RBP17.94■□□□□ 0.46
TRIO-205ENST00000503399 CNTNAP4Q9C0A0 1308 aa17.94■□□□□ 0.46
TRIO-205ENST00000503399 GYS1P13807 737 aa17.93■□□□□ 0.46
TRIO-205ENST00000503399 APLP1P51693 650 aa17.93■□□□□ 0.46
TRIO-205ENST00000503399 CABP4P57796 275 aa17.93■□□□□ 0.46
TRIO-205ENST00000503399 ZNF530Q6P9A1 599 aaPredicted RBP17.93■□□□□ 0.46
TRIO-205ENST00000503399 ZNF831Q5JPB2 1677 aa17.93■□□□□ 0.46
TRIO-205ENST00000503399 RPS6KA4O75676 772 aa17.92■□□□□ 0.46
TRIO-205ENST00000503399 TOMM70O94826 608 aa17.92■□□□□ 0.46
TRIO-205ENST00000503399 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
TRIO-205ENST00000503399 RC3H1Q5TC82 1133 aaKnown RBP17.92■□□□□ 0.46
TRIO-205ENST00000503399 NMRK2Q9NPI5 230 aa17.92■□□□□ 0.46
TRIO-205ENST00000503399 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
TRIO-205ENST00000503399 KDM6AO15550 1401 aaPredicted RBP17.91■□□□□ 0.46
TRIO-205ENST00000503399 PTCD1O75127 700 aaKnown RBP17.91■□□□□ 0.46
TRIO-205ENST00000503399 BRCA1P38398 1863 aaKnown RBP17.89■□□□□ 0.45
TRIO-205ENST00000503399 MTHFSP49914 203 aa17.89■□□□□ 0.45
TRIO-205ENST00000503399 C1orf141Q5JVX7 400 aa17.89■□□□□ 0.45
TRIO-205ENST00000503399 C9orf131Q5VYM1 1079 aa17.89■□□□□ 0.45
TRIO-205ENST00000503399 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.45
TRIO-205ENST00000503399 MYH14Q7Z406 1995 aaKnown RBP17.89■□□□□ 0.45
TRIO-205ENST00000503399 CRKLP46109 303 aaKnown RBP17.88■□□□□ 0.45
TRIO-205ENST00000503399 AMOTQ4VCS5 1084 aa17.88■□□□□ 0.45
TRIO-205ENST00000503399 C16orf71Q8IYS4 520 aaPredicted RBP17.88■□□□□ 0.45
TRIO-205ENST00000503399 AEBP1Q8IUX7 1158 aa17.87■□□□□ 0.45
TRIO-205ENST00000503399 PIM2Q9P1W9 311 aa17.87■□□□□ 0.45
TRIO-205ENST00000503399 ARFGEF1Q9Y6D6 1849 aa17.86■□□□□ 0.45
TRIO-205ENST00000503399 FKBP8Q14318 412 aa17.86■□□□□ 0.45
TRIO-205ENST00000503399 KCNA3P22001 575 aa17.85■□□□□ 0.45
TRIO-205ENST00000503399 DALRD3Q5D0E6 543 aaKnown RBP17.85■□□□□ 0.45
TRIO-205ENST00000503399 NFATC2IPQ8NCF5 419 aa17.85■□□□□ 0.45
TRIO-205ENST00000503399 PANK3Q9H999 370 aa17.85■□□□□ 0.45
TRIO-205ENST00000503399 USP42Q9H9J4 1324 aaKnown RBP17.85■□□□□ 0.45
TRIO-205ENST00000503399 TJP1Q07157 1748 aa17.84■□□□□ 0.45
TRIO-205ENST00000503399 WDR90Q96KV7 1748 aa17.84■□□□□ 0.45
TRIO-205ENST00000503399 KCPQ6ZWJ8 1503 aa17.84■□□□□ 0.45
TRIO-205ENST00000503399 DDR1Q08345 913 aa17.84■□□□□ 0.45
TRIO-205ENST00000503399 RNF181Q9P0P0 153 aa17.84■□□□□ 0.45
TRIO-205ENST00000503399 CHRNA5P30532 468 aa17.83■□□□□ 0.44
TRIO-205ENST00000503399 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
TRIO-205ENST00000503399 SULT6B1Q6IMI4 303 aa17.83■□□□□ 0.44
TRIO-205ENST00000503399 DNAJC5GQ8N7S2 189 aa17.83■□□□□ 0.44
TRIO-205ENST00000503399 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.44
TRIO-205ENST00000503399 KDM2BQ8NHM5 1336 aa17.82■□□□□ 0.44
TRIO-205ENST00000503399 HTRA3P83110 453 aa17.82■□□□□ 0.44
TRIO-205ENST00000503399 MORC1Q86VD1 984 aa17.82■□□□□ 0.44
TRIO-205ENST00000503399 TIMELESSQ9UNS1 1208 aa17.81■□□□□ 0.44
TRIO-205ENST00000503399 ZPR1O75312 459 aa17.8■□□□□ 0.44
TRIO-205ENST00000503399 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
TRIO-205ENST00000503399 POLRMTO00411 1230 aaKnown RBP17.79■□□□□ 0.44
TRIO-205ENST00000503399 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
TRIO-205ENST00000503399 INTS5Q6P9B9 1019 aaKnown RBP17.79■□□□□ 0.44
TRIO-205ENST00000503399 RRAGCQ9HB90 399 aa17.79■□□□□ 0.44
TRIO-205ENST00000503399 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
TRIO-205ENST00000503399 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRIO-205ENST00000503399 FSTL1Q12841 308 aa17.78■□□□□ 0.44
TRIO-205ENST00000503399 DNAJC10Q8IXB1 793 aa17.78■□□□□ 0.44
TRIO-205ENST00000503399 TNRC6CQ9HCJ0 1690 aaKnown RBP17.77■□□□□ 0.44
TRIO-205ENST00000503399 RASSF7Q02833 373 aa17.77■□□□□ 0.44
TRIO-205ENST00000503399 KLRG1Q96E93 195 aa17.77■□□□□ 0.44
TRIO-205ENST00000503399 ADAMTS7Q9UKP4 1686 aa17.77■□□□□ 0.43
TRIO-205ENST00000503399 TM4SF1P30408 202 aa17.76■□□□□ 0.43
TRIO-205ENST00000503399 AKAP4Q5JQC9 854 aa17.76■□□□□ 0.43
TRIO-205ENST00000503399 SBF1O95248 1867 aa17.75■□□□□ 0.43
TRIO-205ENST00000503399 SOS1Q07889 1333 aaPredicted RBP17.75■□□□□ 0.43
TRIO-205ENST00000503399 IL13P35225 146 aa17.75■□□□□ 0.43
TRIO-205ENST00000503399 SLC39A6Q13433 755 aa17.75■□□□□ 0.43
TRIO-205ENST00000503399 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms