RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 FCHSD2O94868 740 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 SIK1P57059 783 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 CABP4P57796 275 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 MTHFSDQ2M296 383 aaKnown RBP11.75□□□□□ -0.53
RNF4-203ENST00000503123 GAS2L2Q8NHY3 880 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 SLC16A10Q8TF71 515 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 MTFR1LQ9H019 292 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 ATG3Q9NT62 314 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 ASAP1Q9ULH1 1129 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 MAP3K5Q99683 1374 aa11.75□□□□□ -0.53
RNF4-203ENST00000503123 KCNQ4P56696 695 aa11.74□□□□□ -0.53
RNF4-203ENST00000503123 PDGFDQ9GZP0 370 aaPredicted RBP11.74□□□□□ -0.53
RNF4-203ENST00000503123 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
RNF4-203ENST00000503123 PNPLA7Q6ZV29 1317 aa11.74□□□□□ -0.53
RNF4-203ENST00000503123 RNMTO43148 476 aaKnown RBP11.73□□□□□ -0.53
RNF4-203ENST00000503123 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
RNF4-203ENST00000503123 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
RNF4-203ENST00000503123 CHD4Q14839 1912 aa11.73□□□□□ -0.53
RNF4-203ENST00000503123 NFATC2IPQ8NCF5 419 aa11.73□□□□□ -0.53
RNF4-203ENST00000503123 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
RNF4-203ENST00000503123 SLC52A2Q9HAB3 445 aa11.73□□□□□ -0.53
RNF4-203ENST00000503123 CEMIPQ8WUJ3 1361 aa11.72□□□□□ -0.53
RNF4-203ENST00000503123 MYBBP1AQ9BQG0 1328 aaKnown RBP11.72□□□□□ -0.53
RNF4-203ENST00000503123 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
RNF4-203ENST00000503123 PRKAR2BP31323 418 aa11.72□□□□□ -0.53
RNF4-203ENST00000503123 KCPQ6ZWJ8 1503 aa11.71□□□□□ -0.53
RNF4-203ENST00000503123 ZBTB7AO95365 584 aa11.71□□□□□ -0.53
RNF4-203ENST00000503123 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
RNF4-203ENST00000503123 PTGER2P43116 358 aa11.71□□□□□ -0.53
RNF4-203ENST00000503123 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
RNF4-203ENST00000503123 LGR6Q9HBX8 967 aa11.71□□□□□ -0.53
RNF4-203ENST00000503123 KDM3BQ7LBC6 1761 aa11.71□□□□□ -0.54
RNF4-203ENST00000503123 KIF13BQ9NQT8 1826 aa11.7□□□□□ -0.54
RNF4-203ENST00000503123 ITPK1Q13572 414 aa11.7□□□□□ -0.54
RNF4-203ENST00000503123 LINC00116Q8NCU8 138 aa11.7□□□□□ -0.54
RNF4-203ENST00000503123 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
RNF4-203ENST00000503123 AK7Q96M32 723 aa11.7□□□□□ -0.54
RNF4-203ENST00000503123 PNNQ9H307 717 aaKnown RBP11.7□□□□□ -0.54
RNF4-203ENST00000503123 LAMB4A4D0S4 1761 aa11.69□□□□□ -0.54
RNF4-203ENST00000503123 CNTNAP4Q9C0A0 1308 aa11.69□□□□□ -0.54
RNF4-203ENST00000503123 SSFA2P28290 1259 aa11.69□□□□□ -0.54
RNF4-203ENST00000503123 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
RNF4-203ENST00000503123 SLC4A9Q96Q91 983 aa11.69□□□□□ -0.54
RNF4-203ENST00000503123 PPP1R1BQ9UD71 204 aaPredicted RBP11.69□□□□□ -0.54
RNF4-203ENST00000503123 HTATSF1O43719 755 aaKnown RBP11.68□□□□□ -0.54
RNF4-203ENST00000503123 NEFMP07197 916 aa11.68□□□□□ -0.54
RNF4-203ENST00000503123 COL23A1Q86Y22 540 aaPredicted RBP11.68□□□□□ -0.54
RNF4-203ENST00000503123 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
RNF4-203ENST00000503123 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
RNF4-203ENST00000503123 PRKRIP1Q9H875 184 aaPredicted RBP11.68□□□□□ -0.54
RNF4-203ENST00000503123 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
RNF4-203ENST00000503123 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
RNF4-203ENST00000503123 TEFQ10587 303 aa11.67□□□□□ -0.54
RNF4-203ENST00000503123 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
RNF4-203ENST00000503123 PLEKHF1Q96S99 279 aa11.67□□□□□ -0.54
RNF4-203ENST00000503123 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.66□□□□□ -0.54
RNF4-203ENST00000503123 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
RNF4-203ENST00000503123 ADRA2BP18089 450 aa11.66□□□□□ -0.54
RNF4-203ENST00000503123 POLD1P28340 1107 aa11.66□□□□□ -0.54
RNF4-203ENST00000503123 RTF1Q92541 710 aaKnown RBP11.66□□□□□ -0.54
RNF4-203ENST00000503123 GNPATO15228 680 aa11.65□□□□□ -0.54
RNF4-203ENST00000503123 ARXQ96QS3 562 aa11.65□□□□□ -0.54
RNF4-203ENST00000503123 RTCBQ9Y3I0 505 aaKnown RBP11.65□□□□□ -0.54
RNF4-203ENST00000503123 AFDNP55196 1824 aaKnown RBP11.65□□□□□ -0.55
RNF4-203ENST00000503123 BRCA1P38398 1863 aaKnown RBP11.64□□□□□ -0.55
RNF4-203ENST00000503123 RPS6KA4O75676 772 aa11.64□□□□□ -0.55
RNF4-203ENST00000503123 SLC39A6Q13433 755 aa11.64□□□□□ -0.55
RNF4-203ENST00000503123 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
RNF4-203ENST00000503123 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
RNF4-203ENST00000503123 TTC5Q8N0Z6 440 aa11.64□□□□□ -0.55
RNF4-203ENST00000503123 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
RNF4-203ENST00000503123 MAPK8IP3Q9UPT6 1336 aa11.63□□□□□ -0.55
RNF4-203ENST00000503123 SCN7AQ01118 1682 aa11.63□□□□□ -0.55
RNF4-203ENST00000503123 MSH5O43196 834 aa11.63□□□□□ -0.55
RNF4-203ENST00000503123 CRKLP46109 303 aaKnown RBP11.63□□□□□ -0.55
RNF4-203ENST00000503123 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
RNF4-203ENST00000503123 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
RNF4-203ENST00000503123 PHF14O94880 888 aa11.62□□□□□ -0.55
RNF4-203ENST00000503123 TRAPPC3LQ5T215 181 aa11.62□□□□□ -0.55
RNF4-203ENST00000503123 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
RNF4-203ENST00000503123 CCDC87Q9NVE4 849 aa11.62□□□□□ -0.55
RNF4-203ENST00000503123 GOLGB1Q14789 3259 aaKnown RBP11.61□□□□□ -0.55
RNF4-203ENST00000503123 KIAA1551Q9HCM1 1747 aa11.61□□□□□ -0.55
RNF4-203ENST00000503123 NRXN2Q9P2S2 1712 aa11.61□□□□□ -0.55
RNF4-203ENST00000503123 BTBD11A6QL63 1104 aa11.61□□□□□ -0.55
RNF4-203ENST00000503123 CYP19A1P11511 503 aaPredicted RBP11.61□□□□□ -0.55
RNF4-203ENST00000503123 INTS5Q6P9B9 1019 aaKnown RBP11.61□□□□□ -0.55
RNF4-203ENST00000503123 MCM10Q7L590 875 aa11.61□□□□□ -0.55
RNF4-203ENST00000503123 DNAJC10Q8IXB1 793 aa11.61□□□□□ -0.55
RNF4-203ENST00000503123 ZNF496Q96IT1 587 aaPredicted RBP11.61□□□□□ -0.55
RNF4-203ENST00000503123 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
RNF4-203ENST00000503123 SYT17Q9BSW7 474 aa11.61□□□□□ -0.55
RNF4-203ENST00000503123 FHDC1Q9C0D6 1143 aaPredicted RBP11.61□□□□□ -0.55
RNF4-203ENST00000503123 NUP98P52948 1817 aa11.6□□□□□ -0.55
RNF4-203ENST00000503123 N4BP2Q86UW6 1770 aaPredicted RBP11.6□□□□□ -0.55
RNF4-203ENST00000503123 STARD3NLO95772 234 aa11.6□□□□□ -0.55
RNF4-203ENST00000503123 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
RNF4-203ENST00000503123 TAF7Q15545 349 aaPredicted RBP11.6□□□□□ -0.55
RNF4-203ENST00000503123 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms