RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 NAP1L2Q9ULW6 460 aaPredicted RBP14.53□□□□□ -0.08
USP46-204ENST00000503060 STRCP1A6NGW2 1772 aa14.53□□□□□ -0.08
USP46-204ENST00000503060 CERS3Q8IU89 383 aa14.53□□□□□ -0.08
USP46-204ENST00000503060 MST1RQ04912 1400 aa14.53□□□□□ -0.08
USP46-204ENST00000503060 NCOA3Q9Y6Q9 1424 aa14.52□□□□□ -0.08
USP46-204ENST00000503060 ATF3P18847 181 aa14.52□□□□□ -0.08
USP46-204ENST00000503060 BABAM1Q9NWV8 329 aa14.52□□□□□ -0.08
USP46-204ENST00000503060 DCCP43146 1447 aa14.52□□□□□ -0.09
USP46-204ENST00000503060 NUCB1Q02818 461 aa14.52□□□□□ -0.09
USP46-204ENST00000503060 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
USP46-204ENST00000503060 TEX2Q8IWB9 1127 aa14.51□□□□□ -0.09
USP46-204ENST00000503060 CNPY4Q8N129 248 aa14.51□□□□□ -0.09
USP46-204ENST00000503060 RGPD2P0DJD1 1756 aa14.51□□□□□ -0.09
USP46-204ENST00000503060 TAF7Q15545 349 aaPredicted RBP14.51□□□□□ -0.09
USP46-204ENST00000503060 LRRC59Q96AG4 307 aaKnown RBP14.51□□□□□ -0.09
USP46-204ENST00000503060 PRDM10Q9NQV6 1147 aa14.5□□□□□ -0.09
USP46-204ENST00000503060 NCAPD2Q15021 1401 aa14.5□□□□□ -0.09
USP46-204ENST00000503060 ALS2Q96Q42 1657 aa14.5□□□□□ -0.09
USP46-204ENST00000503060 SEC24BO95487 1268 aa14.5□□□□□ -0.09
USP46-204ENST00000503060 CHRM1P11229 460 aaPredicted RBP14.5□□□□□ -0.09
USP46-204ENST00000503060 SIRT2Q8IXJ6 389 aa14.5□□□□□ -0.09
USP46-204ENST00000503060 GCC1Q96CN9 775 aa14.5□□□□□ -0.09
USP46-204ENST00000503060 HSPA2P54652 639 aa14.49□□□□□ -0.09
USP46-204ENST00000503060 SOS1Q07889 1333 aaPredicted RBP14.49□□□□□ -0.09
USP46-204ENST00000503060 CHD1LQ86WJ1 897 aa14.49□□□□□ -0.09
USP46-204ENST00000503060 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
USP46-204ENST00000503060 CEMIPQ8WUJ3 1361 aa14.48□□□□□ -0.09
USP46-204ENST00000503060 G2E3Q7L622 706 aa14.48□□□□□ -0.09
USP46-204ENST00000503060 MED1Q15648 1581 aaPredicted RBP14.48□□□□□ -0.09
USP46-204ENST00000503060 PLEKHO1Q53GL0 409 aaPredicted RBP14.47□□□□□ -0.09
USP46-204ENST00000503060 STK31Q9BXU1 1019 aa14.47□□□□□ -0.09
USP46-204ENST00000503060 LNPKQ9C0E8 428 aa14.47□□□□□ -0.09
USP46-204ENST00000503060 CCDC30Q5VVM6 783 aa14.46□□□□□ -0.09
USP46-204ENST00000503060 CADPS2Q86UW7 1296 aa14.46□□□□□ -0.09
USP46-204ENST00000503060 CWC22Q9HCG8 908 aaKnown RBP14.46□□□□□ -0.09
USP46-204ENST00000503060 LMO7Q8WWI1 1683 aa14.46□□□□□ -0.09
USP46-204ENST00000503060 FAM208AQ9UK61 1670 aaKnown RBP14.46□□□□□ -0.09
USP46-204ENST00000503060 CAMTA1Q9Y6Y1 1673 aa14.46□□□□□ -0.09
USP46-204ENST00000503060 AMOTQ4VCS5 1084 aa14.46□□□□□ -0.09
USP46-204ENST00000503060 ANKRD45Q5TZF3 282 aa14.46□□□□□ -0.09
USP46-204ENST00000503060 ZNF530Q6P9A1 599 aaPredicted RBP14.46□□□□□ -0.09
USP46-204ENST00000503060 AXIN2Q9Y2T1 843 aa14.46□□□□□ -0.09
USP46-204ENST00000503060 AKAP4Q5JQC9 854 aa14.45□□□□□ -0.1
USP46-204ENST00000503060 LGR6Q9HBX8 967 aa14.45□□□□□ -0.1
USP46-204ENST00000503060 ATP10DQ9P241 1426 aa14.45□□□□□ -0.1
USP46-204ENST00000503060 CCT4P50991 539 aaKnown RBP14.44□□□□□ -0.1
USP46-204ENST00000503060 CC2D2BQ6DHV5 1058 aa14.44□□□□□ -0.1
USP46-204ENST00000503060 ANKRD44Q8N8A2 993 aa14.44□□□□□ -0.1
USP46-204ENST00000503060 DDX17Q92841 729 aaKnown RBP14.44□□□□□ -0.1
USP46-204ENST00000503060 NPHP3Q7Z494 1330 aa14.44□□□□□ -0.1
USP46-204ENST00000503060 MEIS3Q99687 375 aa14.44□□□□□ -0.1
USP46-204ENST00000503060 F6X3S4 739 aa14.43□□□□□ -0.1
USP46-204ENST00000503060 ZC3H6P61129 1189 aaKnown RBP14.43□□□□□ -0.1
USP46-204ENST00000503060 FLIIQ13045 1269 aa14.43□□□□□ -0.1
USP46-204ENST00000503060 RPAP2Q8IXW5 612 aaPredicted RBP14.43□□□□□ -0.1
USP46-204ENST00000503060 UPF2Q9HAU5 1272 aaKnown RBP14.43□□□□□ -0.1
USP46-204ENST00000503060 PXDNQ92626 1479 aa14.43□□□□□ -0.1
USP46-204ENST00000503060 DCTPP1Q9H773 170 aa14.43□□□□□ -0.1
USP46-204ENST00000503060 ERBB3P21860 1342 aa14.42□□□□□ -0.1
USP46-204ENST00000503060 KDM3BQ7LBC6 1761 aa14.42□□□□□ -0.1
USP46-204ENST00000503060 CEP85Q6P2H3 762 aa14.42□□□□□ -0.1
USP46-204ENST00000503060 SLC4A10Q6U841 1118 aa14.42□□□□□ -0.1
USP46-204ENST00000503060 RGPD5Q99666 1765 aa14.42□□□□□ -0.1
USP46-204ENST00000503060 TNS3Q68CZ2 1445 aa14.42□□□□□ -0.1
USP46-204ENST00000503060 MPRIPQ6WCQ1 1025 aa14.42□□□□□ -0.1
USP46-204ENST00000503060 IPO4Q8TEX9 1081 aaKnown RBP14.42□□□□□ -0.1
USP46-204ENST00000503060 OVOS2A0A0G2JMS6 1433 aa14.41□□□□□ -0.1
USP46-204ENST00000503060 CACNA1FO60840 1977 aa14.41□□□□□ -0.1
USP46-204ENST00000503060 RNMTO43148 476 aaKnown RBP14.41□□□□□ -0.1
USP46-204ENST00000503060 EIF4A1P60842 406 aaKnown RBP14.41□□□□□ -0.1
USP46-204ENST00000503060 TEFQ10587 303 aa14.41□□□□□ -0.1
USP46-204ENST00000503060 C1orf141Q5JVX7 400 aa14.41□□□□□ -0.1
USP46-204ENST00000503060 SLC4A3P48751 1232 aa14.41□□□□□ -0.1
USP46-204ENST00000503060 FKBP5Q13451 457 aaPredicted RBP14.41□□□□□ -0.1
USP46-204ENST00000503060 HDGFL1Q5TGJ6 251 aa14.41□□□□□ -0.1
USP46-204ENST00000503060 TBC1D32Q96NH3 1257 aa14.41□□□□□ -0.1
USP46-204ENST00000503060 PLCD4Q9BRC7 762 aa14.41□□□□□ -0.1
USP46-204ENST00000503060 XIRP1Q702N8 1843 aaKnown RBP14.4□□□□□ -0.1
USP46-204ENST00000503060 PRDM16Q9HAZ2 1276 aa14.4□□□□□ -0.1
USP46-204ENST00000503060 LMTK3Q96Q04 1460 aa14.4□□□□□ -0.1
USP46-204ENST00000503060 HOXB7P09629 217 aa14.4□□□□□ -0.1
USP46-204ENST00000503060 BMP2KLQ5H9B9 411 aa14.4□□□□□ -0.1
USP46-204ENST00000503060 BTBD11A6QL63 1104 aa14.39□□□□□ -0.11
USP46-204ENST00000503060 SPATA31A3Q5VYP0 1347 aa14.39□□□□□ -0.11
USP46-204ENST00000503060 COL18A1P39060 1754 aa14.39□□□□□ -0.11
USP46-204ENST00000503060 KCNQ3O43525 872 aa14.39□□□□□ -0.11
USP46-204ENST00000503060 STRCQ7RTU9 1775 aa14.38□□□□□ -0.11
USP46-204ENST00000503060 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
USP46-204ENST00000503060 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
USP46-204ENST00000503060 CABLES1Q8TDN4 633 aa14.37□□□□□ -0.11
USP46-204ENST00000503060 N4BP2Q86UW6 1770 aaPredicted RBP14.37□□□□□ -0.11
USP46-204ENST00000503060 ABCC6O95255 1503 aa14.37□□□□□ -0.11
USP46-204ENST00000503060 NLRP2Q9NX02 1062 aa14.37□□□□□ -0.11
USP46-204ENST00000503060 CRYBG1Q9Y4K1 1723 aa14.37□□□□□ -0.11
USP46-204ENST00000503060 HMMRO75330 724 aa14.36□□□□□ -0.11
USP46-204ENST00000503060 GNAI2P04899 355 aa14.36□□□□□ -0.11
USP46-204ENST00000503060 MFAP1P55081 439 aaKnown RBP14.36□□□□□ -0.11
USP46-204ENST00000503060 SECISBP2LQ93073 1101 aaKnown RBP14.36□□□□□ -0.11
USP46-204ENST00000503060 ADAMTS7Q9UKP4 1686 aa14.36□□□□□ -0.11
USP46-204ENST00000503060 GNAI3P08754 354 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms