RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-216ENST00000502848 LARP1Q6PKG0 1096 aaKnown RBP11.64□□□□□ -0.55
NR1I3-216ENST00000502848 SMC4Q9NTJ3 1288 aa11.64□□□□□ -0.55
NR1I3-216ENST00000502848 LAS1LQ9Y4W2 734 aaKnown RBP11.64□□□□□ -0.55
NR1I3-216ENST00000502848 TNS2Q63HR2 1409 aa11.63□□□□□ -0.55
NR1I3-216ENST00000502848 BCAR3O75815 825 aa11.63□□□□□ -0.55
NR1I3-216ENST00000502848 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
NR1I3-216ENST00000502848 SSH1Q8WYL5 1049 aa11.63□□□□□ -0.55
NR1I3-216ENST00000502848 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
NR1I3-216ENST00000502848 ERVV-2B6SEH9 535 aa11.62□□□□□ -0.55
NR1I3-216ENST00000502848 CYP27B1O15528 508 aa11.62□□□□□ -0.55
NR1I3-216ENST00000502848 BARGINQ6ZT62 677 aa11.62□□□□□ -0.55
NR1I3-216ENST00000502848 FNBP4Q8N3X1 1017 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-216ENST00000502848 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
NR1I3-216ENST00000502848 SLC52A2Q9HAB3 445 aa11.62□□□□□ -0.55
NR1I3-216ENST00000502848 STRN4Q9NRL3 753 aa11.62□□□□□ -0.55
NR1I3-216ENST00000502848 SPATA31A1Q5TZJ5 1347 aa11.61□□□□□ -0.55
NR1I3-216ENST00000502848 SPATA31A5Q5VU36 1347 aa11.61□□□□□ -0.55
NR1I3-216ENST00000502848 SPATA31A7Q8IWB4 1347 aa11.61□□□□□ -0.55
NR1I3-216ENST00000502848 SHANK3Q9BYB0 1731 aa11.61□□□□□ -0.55
NR1I3-216ENST00000502848 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
NR1I3-216ENST00000502848 ATF7IPQ6VMQ6 1270 aa11.61□□□□□ -0.55
NR1I3-216ENST00000502848 C8orf58Q8NAV2 365 aa11.61□□□□□ -0.55
NR1I3-216ENST00000502848 PTPRCP08575 1304 aa11.6□□□□□ -0.55
NR1I3-216ENST00000502848 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
NR1I3-216ENST00000502848 VPS72Q15906 364 aa11.6□□□□□ -0.55
NR1I3-216ENST00000502848 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
NR1I3-216ENST00000502848 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
NR1I3-216ENST00000502848 UNC5CLQ8IV45 518 aa11.6□□□□□ -0.55
NR1I3-216ENST00000502848 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
NR1I3-216ENST00000502848 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
NR1I3-216ENST00000502848 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
NR1I3-216ENST00000502848 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
NR1I3-216ENST00000502848 BCL9LQ86UU0 1499 aa11.59□□□□□ -0.55
NR1I3-216ENST00000502848 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
NR1I3-216ENST00000502848 DZIP1LQ8IYY4 767 aaKnown RBP11.59□□□□□ -0.55
NR1I3-216ENST00000502848 TSPYL6Q8N831 410 aa11.59□□□□□ -0.55
NR1I3-216ENST00000502848 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
NR1I3-216ENST00000502848 PAPPAQ13219 1627 aa11.58□□□□□ -0.56
NR1I3-216ENST00000502848 PLIN1O60240 522 aa11.58□□□□□ -0.56
NR1I3-216ENST00000502848 ADAMTS2O95450 1211 aa11.58□□□□□ -0.56
NR1I3-216ENST00000502848 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
NR1I3-216ENST00000502848 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
NR1I3-216ENST00000502848 TRIM27P14373 513 aa11.57□□□□□ -0.56
NR1I3-216ENST00000502848 ZNF790Q6PG37 636 aa11.57□□□□□ -0.56
NR1I3-216ENST00000502848 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
NR1I3-216ENST00000502848 FRAT1Q92837 279 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-216ENST00000502848 DDX19BQ9UMR2 479 aa11.57□□□□□ -0.56
NR1I3-216ENST00000502848 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
NR1I3-216ENST00000502848 ABCC4O15439 1325 aa11.57□□□□□ -0.56
NR1I3-216ENST00000502848 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-216ENST00000502848 NUTM2BA6NNL0 878 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-216ENST00000502848 NUTM2EB1AL46 878 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-216ENST00000502848 EXOC5O00471 708 aa11.56□□□□□ -0.56
NR1I3-216ENST00000502848 HSPA1LP34931 641 aa11.56□□□□□ -0.56
NR1I3-216ENST00000502848 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-216ENST00000502848 MVPQ14764 893 aaKnown RBP11.56□□□□□ -0.56
NR1I3-216ENST00000502848 NUTM2AQ8IVF1 878 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-216ENST00000502848 EXOC6Q8TAG9 804 aa11.56□□□□□ -0.56
NR1I3-216ENST00000502848 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
NR1I3-216ENST00000502848 NOB1Q9ULX3 412 aaKnown RBP11.56□□□□□ -0.56
NR1I3-216ENST00000502848 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
NR1I3-216ENST00000502848 BCL9O00512 1426 aa11.55□□□□□ -0.56
NR1I3-216ENST00000502848 UBR2Q8IWV8 1755 aa11.55□□□□□ -0.56
NR1I3-216ENST00000502848 CABP4P57796 275 aa11.55□□□□□ -0.56
NR1I3-216ENST00000502848 C20orf194Q5TEA3 1177 aa11.55□□□□□ -0.56
NR1I3-216ENST00000502848 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
NR1I3-216ENST00000502848 BCL2L13Q9BXK5 485 aa11.55□□□□□ -0.56
NR1I3-216ENST00000502848 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-216ENST00000502848 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
NR1I3-216ENST00000502848 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
NR1I3-216ENST00000502848 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
NR1I3-216ENST00000502848 FMNL2Q96PY5 1086 aa11.54□□□□□ -0.56
NR1I3-216ENST00000502848 MIS18AQ9NYP9 233 aa11.54□□□□□ -0.56
NR1I3-216ENST00000502848 THSD7AQ9UPZ6 1657 aa11.54□□□□□ -0.56
NR1I3-216ENST00000502848 GLI3P10071 1580 aa11.54□□□□□ -0.56
NR1I3-216ENST00000502848 RGS12O14924 1447 aa11.53□□□□□ -0.56
NR1I3-216ENST00000502848 ATRNO75882 1429 aa11.53□□□□□ -0.56
NR1I3-216ENST00000502848 TOGARAM1Q9Y4F4 1720 aa11.53□□□□□ -0.56
NR1I3-216ENST00000502848 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-216ENST00000502848 DDB1Q16531 1140 aa11.53□□□□□ -0.56
NR1I3-216ENST00000502848 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
NR1I3-216ENST00000502848 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
NR1I3-216ENST00000502848 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
NR1I3-216ENST00000502848 DBF4Q9UBU7 674 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-216ENST00000502848 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
NR1I3-216ENST00000502848 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-216ENST00000502848 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
NR1I3-216ENST00000502848 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
NR1I3-216ENST00000502848 CAPN15O75808 1086 aa11.52□□□□□ -0.57
NR1I3-216ENST00000502848 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.57
NR1I3-216ENST00000502848 KRT24Q2M2I5 525 aa11.52□□□□□ -0.57
NR1I3-216ENST00000502848 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.57
NR1I3-216ENST00000502848 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
NR1I3-216ENST00000502848 USP21Q9UK80 565 aa11.52□□□□□ -0.57
NR1I3-216ENST00000502848 RLBP1P12271 317 aa11.51□□□□□ -0.57
NR1I3-216ENST00000502848 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
NR1I3-216ENST00000502848 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
NR1I3-216ENST00000502848 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-216ENST00000502848 DDX54Q8TDD1 881 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms