RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 ATP1A2P50993 1020 aa8.36□□□□□ -1.07
CDC42SE2-204ENST00000502639 GDF10P55107 478 aa8.36□□□□□ -1.07
CDC42SE2-204ENST00000502639 DPYDQ12882 1025 aa8.36□□□□□ -1.07
CDC42SE2-204ENST00000502639 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-204ENST00000502639 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
CDC42SE2-204ENST00000502639 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDC42SE2-204ENST00000502639 STK32AQ8WU08 396 aa8.36□□□□□ -1.07
CDC42SE2-204ENST00000502639 XAGE2Q96GT9 111 aa8.36□□□□□ -1.07
CDC42SE2-204ENST00000502639 ESF1Q9H501 851 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-204ENST00000502639 SPINT1O43278 529 aa8.35□□□□□ -1.07
CDC42SE2-204ENST00000502639 ELOAQ14241 798 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-204ENST00000502639 ANKMY2Q8IV38 441 aa8.35□□□□□ -1.07
CDC42SE2-204ENST00000502639 INSM2Q96T92 566 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-204ENST00000502639 TSEN34Q9BSV6 310 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-204ENST00000502639 ZNF358Q9NW07 568 aa8.35□□□□□ -1.07
CDC42SE2-204ENST00000502639 NOVA2Q9UNW9 492 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-204ENST00000502639 CARNS1A5YM72 827 aa8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 WASLO00401 505 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 INHAP05111 366 aa8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 CTSOP43234 321 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 PSME1Q06323 249 aa8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 FAM69CQ0P6D2 419 aa8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 CLN3Q13286 438 aa8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 C6orf118Q5T5N4 469 aa8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 SLC16A10Q8TF71 515 aa8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 PURBQ96QR8 312 aaKnown RBP8.34□□□□□ -1.07
CDC42SE2-204ENST00000502639 ERBB4Q15303 1308 aa8.33□□□□□ -1.08
CDC42SE2-204ENST00000502639 TMEM164Q5U3C3 297 aa8.33□□□□□ -1.08
CDC42SE2-204ENST00000502639 ZSCAN1Q8NBB4 408 aa8.33□□□□□ -1.08
CDC42SE2-204ENST00000502639 CNKSR1Q969H4 720 aa8.33□□□□□ -1.08
CDC42SE2-204ENST00000502639 TRIM52Q96A61 297 aa8.33□□□□□ -1.08
CDC42SE2-204ENST00000502639 ZFP42Q96MM3 310 aa8.33□□□□□ -1.08
CDC42SE2-204ENST00000502639 SLAIN2Q9P270 581 aa8.33□□□□□ -1.08
CDC42SE2-204ENST00000502639 SERTAD1Q9UHV2 236 aa8.33□□□□□ -1.08
CDC42SE2-204ENST00000502639 MEN1O00255 615 aa8.32□□□□□ -1.08
CDC42SE2-204ENST00000502639 LGR5O75473 907 aa8.32□□□□□ -1.08
CDC42SE2-204ENST00000502639 BMP2P12643 396 aa8.32□□□□□ -1.08
CDC42SE2-204ENST00000502639 EPHA4P54764 986 aa8.32□□□□□ -1.08
CDC42SE2-204ENST00000502639 FOXD4L5Q5VV16 416 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE2-204ENST00000502639 RETREG2Q8NC44 543 aa8.32□□□□□ -1.08
CDC42SE2-204ENST00000502639 SLC4A9Q96Q91 983 aa8.32□□□□□ -1.08
CDC42SE2-204ENST00000502639 ESYT1Q9BSJ8 1104 aa8.32□□□□□ -1.08
CDC42SE2-204ENST00000502639 FHDC1Q9C0D6 1143 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE2-204ENST00000502639 TMEM88BA6NKF7 163 aa8.31□□□□□ -1.08
CDC42SE2-204ENST00000502639 SEC13P55735 322 aa8.31□□□□□ -1.08
CDC42SE2-204ENST00000502639 CENPCQ03188 943 aa8.31□□□□□ -1.08
CDC42SE2-204ENST00000502639 TSEN2Q8NCE0 465 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-204ENST00000502639 USP3Q9Y6I4 520 aa8.31□□□□□ -1.08
CDC42SE2-204ENST00000502639 SOS2Q07890 1332 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE2-204ENST00000502639 TNS4Q8IZW8 715 aa8.3□□□□□ -1.08
CDC42SE2-204ENST00000502639 FAM200AQ8TCP9 573 aa8.3□□□□□ -1.08
CDC42SE2-204ENST00000502639 ACIN1Q9UKV3 1341 aaKnown RBP8.29□□□□□ -1.08
CDC42SE2-204ENST00000502639 FAM181BA6NEQ2 426 aa8.29□□□□□ -1.08
CDC42SE2-204ENST00000502639 H3BM21 787 aa8.29□□□□□ -1.08
CDC42SE2-204ENST00000502639 RNF144AP50876 292 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE2-204ENST00000502639 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
CDC42SE2-204ENST00000502639 ZNF295-AS1Q8N0V1 137 aa8.29□□□□□ -1.08
CDC42SE2-204ENST00000502639 GAS2L2Q8NHY3 880 aa8.29□□□□□ -1.08
CDC42SE2-204ENST00000502639 IRF7Q92985 503 aa8.29□□□□□ -1.08
CDC42SE2-204ENST00000502639 GRIP2Q9C0E4 1043 aa8.29□□□□□ -1.08
CDC42SE2-204ENST00000502639 M0R2N6 131 aa8.28□□□□□ -1.08
CDC42SE2-204ENST00000502639 UPP2O95045 317 aa8.28□□□□□ -1.08
CDC42SE2-204ENST00000502639 SMTNP53814 917 aa8.28□□□□□ -1.08
CDC42SE2-204ENST00000502639 FOXK2Q01167 660 aa8.28□□□□□ -1.08
CDC42SE2-204ENST00000502639 SCARF1Q14162 830 aa8.28□□□□□ -1.08
CDC42SE2-204ENST00000502639 MTFR1Q15390 333 aa8.28□□□□□ -1.08
CDC42SE2-204ENST00000502639 RNF217Q8TC41 542 aa8.28□□□□□ -1.08
CDC42SE2-204ENST00000502639 IQSEC3Q9UPP2 1182 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE2-204ENST00000502639 A6NJY4 79 aa8.27□□□□□ -1.09
CDC42SE2-204ENST00000502639 NLRP3Q96P20 1036 aa8.27□□□□□ -1.09
CDC42SE2-204ENST00000502639 POLMQ9NP87 494 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE2-204ENST00000502639 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.09
CDC42SE2-204ENST00000502639 FIGNL2A6NMB9 653 aa8.26□□□□□ -1.09
CDC42SE2-204ENST00000502639 TTLL8A6PVC2 850 aa8.26□□□□□ -1.09
CDC42SE2-204ENST00000502639 SOBPA7XYQ1 873 aa8.26□□□□□ -1.09
CDC42SE2-204ENST00000502639 C21orf2O43822 256 aa8.26□□□□□ -1.09
CDC42SE2-204ENST00000502639 GPC1P35052 558 aa8.26□□□□□ -1.09
CDC42SE2-204ENST00000502639 TLR1Q15399 786 aa8.26□□□□□ -1.09
CDC42SE2-204ENST00000502639 TBCELQ5QJ74 424 aa8.26□□□□□ -1.09
CDC42SE2-204ENST00000502639 NPAS3Q8IXF0 933 aa8.26□□□□□ -1.09
CDC42SE2-204ENST00000502639 SCHIP1Q9P0W5 487 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE2-204ENST00000502639 BACH1O14867 736 aa8.25□□□□□ -1.09
CDC42SE2-204ENST00000502639 TSPAN10Q9H1Z9 355 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE2-204ENST00000502639 CDK2AP1O14519 115 aa8.24□□□□□ -1.09
CDC42SE2-204ENST00000502639 CSB-PGBD3P0DP91 1061 aa8.24□□□□□ -1.09
CDC42SE2-204ENST00000502639 OCLNQ16625 522 aa8.24□□□□□ -1.09
CDC42SE2-204ENST00000502639 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-204ENST00000502639 HINFPQ9BQA5 517 aa8.24□□□□□ -1.09
CDC42SE2-204ENST00000502639 WEE1P30291 646 aa8.23□□□□□ -1.09
CDC42SE2-204ENST00000502639 SWI5Q1ZZU3 235 aa8.23□□□□□ -1.09
CDC42SE2-204ENST00000502639 PRICKLE2Q7Z3G6 844 aa8.23□□□□□ -1.09
CDC42SE2-204ENST00000502639 SLC9A9Q8IVB4 645 aa8.23□□□□□ -1.09
CDC42SE2-204ENST00000502639 CLP1Q92989 425 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-204ENST00000502639 PRIMPOLQ96LW4 560 aa8.23□□□□□ -1.09
CDC42SE2-204ENST00000502639 ZSCAN10Q96SZ4 725 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE2-204ENST00000502639 RBM19Q9Y4C8 960 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-204ENST00000502639 PRMT3O60678 531 aa8.22□□□□□ -1.09
CDC42SE2-204ENST00000502639 POU4F2Q12837 409 aa8.22□□□□□ -1.09
CDC42SE2-204ENST00000502639 SLC27A3Q5K4L6 730 aa8.22□□□□□ -1.09
CDC42SE2-204ENST00000502639 PHLDB3Q6NSJ2 640 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms