RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.17
CDK7-202ENST00000502604 SIK1P57059 783 aa16.14■□□□□ 0.17
CDK7-202ENST00000502604 SMIM5Q71RC9 77 aa16.14■□□□□ 0.17
CDK7-202ENST00000502604 SCN11AQ9UI33 1791 aa16.13■□□□□ 0.17
CDK7-202ENST00000502604 PER1O15534 1290 aaPredicted RBP16.13■□□□□ 0.17
CDK7-202ENST00000502604 LINC00116Q8NCU8 138 aa16.13■□□□□ 0.17
CDK7-202ENST00000502604 AK7Q96M32 723 aa16.13■□□□□ 0.17
CDK7-202ENST00000502604 KDRP35968 1356 aa16.13■□□□□ 0.17
CDK7-202ENST00000502604 COL5A3P25940 1745 aaPredicted RBP16.13■□□□□ 0.17
CDK7-202ENST00000502604 IL13P35225 146 aa16.12■□□□□ 0.17
CDK7-202ENST00000502604 PLEKHO1Q53GL0 409 aaPredicted RBP16.12■□□□□ 0.17
CDK7-202ENST00000502604 SULT6B1Q6IMI4 303 aa16.12■□□□□ 0.17
CDK7-202ENST00000502604 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
CDK7-202ENST00000502604 ATG3Q9NT62 314 aa16.12■□□□□ 0.17
CDK7-202ENST00000502604 ZNF831Q5JPB2 1677 aa16.12■□□□□ 0.17
CDK7-202ENST00000502604 PHF14O94880 888 aa16.11■□□□□ 0.17
CDK7-202ENST00000502604 ITPK1Q13572 414 aa16.11■□□□□ 0.17
CDK7-202ENST00000502604 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
CDK7-202ENST00000502604 MTHFSP49914 203 aa16.1■□□□□ 0.17
CDK7-202ENST00000502604 NLGN2Q8NFZ4 835 aa16.1■□□□□ 0.17
CDK7-202ENST00000502604 DCAF5Q96JK2 942 aa16.1■□□□□ 0.17
CDK7-202ENST00000502604 ERVV-2B6SEH9 535 aa16.1■□□□□ 0.17
CDK7-202ENST00000502604 HSP90AB1P08238 724 aaKnown RBP16.1■□□□□ 0.17
CDK7-202ENST00000502604 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
CDK7-202ENST00000502604 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
CDK7-202ENST00000502604 AMOTQ4VCS5 1084 aa16.1■□□□□ 0.17
CDK7-202ENST00000502604 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
CDK7-202ENST00000502604 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
CDK7-202ENST00000502604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
CDK7-202ENST00000502604 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.16
CDK7-202ENST00000502604 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
CDK7-202ENST00000502604 GNPATO15228 680 aa16.07■□□□□ 0.16
CDK7-202ENST00000502604 SSFA2P28290 1259 aa16.07■□□□□ 0.16
CDK7-202ENST00000502604 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
CDK7-202ENST00000502604 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
CDK7-202ENST00000502604 TJP1Q07157 1748 aa16.06■□□□□ 0.16
CDK7-202ENST00000502604 CABP4P57796 275 aa16.06■□□□□ 0.16
CDK7-202ENST00000502604 GPR162Q16538 588 aa16.06■□□□□ 0.16
CDK7-202ENST00000502604 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
CDK7-202ENST00000502604 HMOX1P09601 288 aa16.05■□□□□ 0.16
CDK7-202ENST00000502604 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
CDK7-202ENST00000502604 COL3A1P02461 1466 aaPredicted RBP16.05■□□□□ 0.16
CDK7-202ENST00000502604 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
CDK7-202ENST00000502604 NFATC2IPQ8NCF5 419 aa16.03■□□□□ 0.16
CDK7-202ENST00000502604 CICQ96RK0 1608 aaPredicted RBP16.03■□□□□ 0.16
CDK7-202ENST00000502604 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
CDK7-202ENST00000502604 DIAPH1O60610 1272 aaKnown RBP16.03■□□□□ 0.16
CDK7-202ENST00000502604 MRC1P22897 1456 aa16.02■□□□□ 0.16
CDK7-202ENST00000502604 PTCD1O75127 700 aaKnown RBP16.02■□□□□ 0.15
CDK7-202ENST00000502604 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.151e-6■■□□□ 12.8
CDK7-202ENST00000502604 AKAP4Q5JQC9 854 aa16.02■□□□□ 0.15
CDK7-202ENST00000502604 ZNF784Q8NCA9 323 aaPredicted RBP16.01■□□□□ 0.15
CDK7-202ENST00000502604 CD2APQ9Y5K6 639 aa16.01■□□□□ 0.15
CDK7-202ENST00000502604 CNTNAP4Q9C0A0 1308 aa16■□□□□ 0.15
CDK7-202ENST00000502604 KIF13BQ9NQT8 1826 aa16■□□□□ 0.15
CDK7-202ENST00000502604 LGR6Q9HBX8 967 aa16■□□□□ 0.15
CDK7-202ENST00000502604 RTCBQ9Y3I0 505 aaKnown RBP16■□□□□ 0.15
CDK7-202ENST00000502604 MTHFSDQ2M296 383 aaKnown RBP15.99■□□□□ 0.15
CDK7-202ENST00000502604 KIAA1551Q9HCM1 1747 aa15.99■□□□□ 0.15
CDK7-202ENST00000502604 TRAPPC3LQ5T215 181 aa15.98■□□□□ 0.15
CDK7-202ENST00000502604 RC3H1Q5TC82 1133 aaKnown RBP15.98■□□□□ 0.15
CDK7-202ENST00000502604 SLC52A2Q9HAB3 445 aa15.98■□□□□ 0.15
CDK7-202ENST00000502604 UBR2Q8IWV8 1755 aa15.98■□□□□ 0.15
CDK7-202ENST00000502604 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
CDK7-202ENST00000502604 RNMTO43148 476 aaKnown RBP15.97■□□□□ 0.15
CDK7-202ENST00000502604 ARHGEF1Q92888 912 aaKnown RBP15.97■□□□□ 0.15
CDK7-202ENST00000502604 KCPQ6ZWJ8 1503 aa15.97■□□□□ 0.15
CDK7-202ENST00000502604 SIPA1L3O60292 1781 aaPredicted RBP15.97■□□□□ 0.15
CDK7-202ENST00000502604 U2SURPO15042 1029 aaKnown RBP15.97■□□□□ 0.15
CDK7-202ENST00000502604 MMP10P09238 476 aa15.97■□□□□ 0.15
CDK7-202ENST00000502604 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
CDK7-202ENST00000502604 RPS6KA4O75676 772 aa15.96■□□□□ 0.14
CDK7-202ENST00000502604 SLC4A2P04920 1241 aa15.96■□□□□ 0.14
CDK7-202ENST00000502604 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.14
CDK7-202ENST00000502604 SLC39A6Q13433 755 aa15.96■□□□□ 0.14
CDK7-202ENST00000502604 WWC3Q9ULE0 1092 aa15.96■□□□□ 0.14
CDK7-202ENST00000502604 GRIN3BO60391 1043 aa15.94■□□□□ 0.14
CDK7-202ENST00000502604 GYS1P13807 737 aa15.94■□□□□ 0.14
CDK7-202ENST00000502604 RFC4P35249 363 aa15.94■□□□□ 0.14
CDK7-202ENST00000502604 BRCA1P38398 1863 aaKnown RBP15.94■□□□□ 0.14
CDK7-202ENST00000502604 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
CDK7-202ENST00000502604 DNAJC10Q8IXB1 793 aa15.93■□□□□ 0.14
CDK7-202ENST00000502604 INTS5Q6P9B9 1019 aaKnown RBP15.92■□□□□ 0.14
CDK7-202ENST00000502604 NLGN1Q8N2Q7 840 aa15.92■□□□□ 0.14
CDK7-202ENST00000502604 C10orf71Q711Q0 1435 aa15.92■□□□□ 0.14
CDK7-202ENST00000502604 PXDNLA1KZ92 1463 aa15.92■□□□□ 0.14
CDK7-202ENST00000502604 SRP68Q9UHB9 627 aaKnown RBP15.91■□□□□ 0.14
CDK7-202ENST00000502604 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
CDK7-202ENST00000502604 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
CDK7-202ENST00000502604 CFAP53Q96M91 514 aa15.9■□□□□ 0.14
CDK7-202ENST00000502604 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
CDK7-202ENST00000502604 CCDC87Q9NVE4 849 aa15.9■□□□□ 0.14
CDK7-202ENST00000502604 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
CDK7-202ENST00000502604 AFDNP55196 1824 aaKnown RBP15.89■□□□□ 0.13
CDK7-202ENST00000502604 GNAT3A8MTJ3 354 aa15.89■□□□□ 0.13
CDK7-202ENST00000502604 CYP19A1P11511 503 aaPredicted RBP15.89■□□□□ 0.13
CDK7-202ENST00000502604 PRKAR2BP31323 418 aa15.89■□□□□ 0.13
CDK7-202ENST00000502604 FKBP8Q14318 412 aa15.89■□□□□ 0.13
CDK7-202ENST00000502604 IL17REQ8NFR9 667 aa15.89■□□□□ 0.13
CDK7-202ENST00000502604 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms