RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 DCAF5Q96JK2 942 aa30.87■■■□□ 2.53
TNFRSF25-216ENST00000502588 HMOX1P09601 288 aa30.86■■■□□ 2.53
TNFRSF25-216ENST00000502588 MAP3K5Q99683 1374 aa30.86■■■□□ 2.53
TNFRSF25-216ENST00000502588 KLHL34Q8N239 644 aa30.85■■■□□ 2.53
TNFRSF25-216ENST00000502588 ERVV-2B6SEH9 535 aa30.84■■■□□ 2.53
TNFRSF25-216ENST00000502588 HSP90AB1P08238 724 aaKnown RBP30.84■■■□□ 2.53
TNFRSF25-216ENST00000502588 POLD1P28340 1107 aa30.84■■■□□ 2.53
TNFRSF25-216ENST00000502588 AK7Q96M32 723 aa30.84■■■□□ 2.53
TNFRSF25-216ENST00000502588 SLC4A9Q96Q91 983 aa30.84■■■□□ 2.53
TNFRSF25-216ENST00000502588 PHF14O94880 888 aa30.83■■■□□ 2.53
TNFRSF25-216ENST00000502588 ATP6V1AP38606 617 aa30.82■■■□□ 2.52
TNFRSF25-216ENST00000502588 C1orf141Q5JVX7 400 aa30.82■■■□□ 2.52
TNFRSF25-216ENST00000502588 DIAPH1O60610 1272 aaKnown RBP30.8■■■□□ 2.52
TNFRSF25-216ENST00000502588 TJP1Q07157 1748 aa30.8■■■□□ 2.52
TNFRSF25-216ENST00000502588 MYH14Q7Z406 1995 aaKnown RBP30.79■■■□□ 2.52
TNFRSF25-216ENST00000502588 DCAF8L1A6NGE4 600 aa30.79■■■□□ 2.52
TNFRSF25-216ENST00000502588 CABP4P57796 275 aa30.79■■■□□ 2.52
TNFRSF25-216ENST00000502588 ADAMTS7Q9UKP4 1686 aa30.78■■■□□ 2.52
TNFRSF25-216ENST00000502588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.78■■■□□ 2.52
TNFRSF25-216ENST00000502588 NLGN2Q8NFZ4 835 aa30.78■■■□□ 2.52
TNFRSF25-216ENST00000502588 YY1P25490 414 aa30.77■■■□□ 2.52
TNFRSF25-216ENST00000502588 RBM42Q9BTD8 480 aaKnown RBP30.77■■■□□ 2.52
TNFRSF25-216ENST00000502588 FLAD1Q8NFF5 587 aa30.76■■■□□ 2.51
TNFRSF25-216ENST00000502588 CHD4Q14839 1912 aa30.76■■■□□ 2.51
TNFRSF25-216ENST00000502588 GNPATO15228 680 aa30.75■■■□□ 2.51
TNFRSF25-216ENST00000502588 NFATC2IPQ8NCF5 419 aa30.75■■■□□ 2.51
TNFRSF25-216ENST00000502588 C4AP0C0L4 1744 aa30.75■■■□□ 2.51
TNFRSF25-216ENST00000502588 MRC1P22897 1456 aa30.74■■■□□ 2.51
TNFRSF25-216ENST00000502588 CICQ96RK0 1608 aaPredicted RBP30.73■■■□□ 2.51
TNFRSF25-216ENST00000502588 AKAP4Q5JQC9 854 aa30.73■■■□□ 2.51
TNFRSF25-216ENST00000502588 LGR6Q9HBX8 967 aa30.73■■■□□ 2.51
TNFRSF25-216ENST00000502588 UTRNP46939 3433 aa30.72■■■□□ 2.51
TNFRSF25-216ENST00000502588 HMGB2P26583 209 aaKnown RBP30.72■■■□□ 2.51
TNFRSF25-216ENST00000502588 SSFA2P28290 1259 aa30.72■■■□□ 2.51
TNFRSF25-216ENST00000502588 MTHFSDQ2M296 383 aaKnown RBP30.72■■■□□ 2.51
TNFRSF25-216ENST00000502588 PTCD1O75127 700 aaKnown RBP30.7■■■□□ 2.51
TNFRSF25-216ENST00000502588 U2SURPO15042 1029 aaKnown RBP30.69■■■□□ 2.5
TNFRSF25-216ENST00000502588 RNMTO43148 476 aaKnown RBP30.66■■■□□ 2.5
TNFRSF25-216ENST00000502588 SIPA1L3O60292 1781 aaPredicted RBP30.66■■■□□ 2.5
TNFRSF25-216ENST00000502588 UBR2Q8IWV8 1755 aa30.66■■■□□ 2.5
TNFRSF25-216ENST00000502588 SLC52A2Q9HAB3 445 aa30.65■■■□□ 2.5
TNFRSF25-216ENST00000502588 CNTNAP4Q9C0A0 1308 aa30.65■■■□□ 2.5
TNFRSF25-216ENST00000502588 KCPQ6ZWJ8 1503 aa30.64■■■□□ 2.5
TNFRSF25-216ENST00000502588 PELP1Q8IZL8 1130 aaKnown RBP30.64■■■□□ 2.5
TNFRSF25-216ENST00000502588 PPP2R1AP30153 589 aa30.63■■■□□ 2.49
TNFRSF25-216ENST00000502588 GPR162Q16538 588 aa30.63■■■□□ 2.49
TNFRSF25-216ENST00000502588 GOLGB1Q14789 3259 aaKnown RBP30.62■■■□□ 2.49
TNFRSF25-216ENST00000502588 RTCBQ9Y3I0 505 aaKnown RBP30.62■■■□□ 2.49
TNFRSF25-216ENST00000502588 SLC39A6Q13433 755 aa30.61■■■□□ 2.49
TNFRSF25-216ENST00000502588 RC3H1Q5TC82 1133 aaKnown RBP30.61■■■□□ 2.49
TNFRSF25-216ENST00000502588 YBX3P16989 372 aaKnown RBP eCLIP30.59■■■□□ 2.49
TNFRSF25-216ENST00000502588 ARHGEF1Q92888 912 aaKnown RBP30.59■■■□□ 2.49
TNFRSF25-216ENST00000502588 KIF13BQ9NQT8 1826 aa30.59■■■□□ 2.49
TNFRSF25-216ENST00000502588 KIAA1551Q9HCM1 1747 aa30.59■■■□□ 2.49
TNFRSF25-216ENST00000502588 CRKLP46109 303 aaKnown RBP30.58■■■□□ 2.49
TNFRSF25-216ENST00000502588 RPS6KA4O75676 772 aa30.57■■■□□ 2.48
TNFRSF25-216ENST00000502588 TRAPPC3LQ5T215 181 aa30.57■■■□□ 2.48
TNFRSF25-216ENST00000502588 DNAJC10Q8IXB1 793 aa30.56■■■□□ 2.48
TNFRSF25-216ENST00000502588 PHACTR3Q96KR7 559 aa30.56■■■□□ 2.48
TNFRSF25-216ENST00000502588 CFAP53Q96M91 514 aa30.56■■■□□ 2.48
TNFRSF25-216ENST00000502588 CD2APQ9Y5K6 639 aa30.56■■■□□ 2.48
TNFRSF25-216ENST00000502588 RSPH6AQ9H0K4 717 aa30.55■■■□□ 2.48
TNFRSF25-216ENST00000502588 N4BP2Q86UW6 1770 aaPredicted RBP30.54■■■□□ 2.48
TNFRSF25-216ENST00000502588 MMP10P09238 476 aa30.54■■■□□ 2.48
TNFRSF25-216ENST00000502588 PRKAR2BP31323 418 aa30.54■■■□□ 2.48
TNFRSF25-216ENST00000502588 IL17REQ8NFR9 667 aa30.53■■■□□ 2.48
TNFRSF25-216ENST00000502588 GYS1P13807 737 aa30.52■■■□□ 2.48
TNFRSF25-216ENST00000502588 ADRA2BP18089 450 aa30.52■■■□□ 2.48
TNFRSF25-216ENST00000502588 INTS5Q6P9B9 1019 aaKnown RBP30.52■■■□□ 2.48
TNFRSF25-216ENST00000502588 GAS2L2Q8NHY3 880 aa30.51■■■□□ 2.47
TNFRSF25-216ENST00000502588 SRP68Q9UHB9 627 aaKnown RBP30.51■■■□□ 2.47
TNFRSF25-216ENST00000502588 WWC3Q9ULE0 1092 aa30.51■■■□□ 2.47
TNFRSF25-216ENST00000502588 RFC4P35249 363 aa30.5■■■□□ 2.47
TNFRSF25-216ENST00000502588 GNAT3A8MTJ3 354 aa30.49■■■□□ 2.47
TNFRSF25-216ENST00000502588 U2AF1L5P0DN76 240 aaPredicted RBP30.48■■■□□ 2.47
TNFRSF25-216ENST00000502588 U2AF1Q01081 240 aaKnown RBP eCLIP30.48■■■□□ 2.47
TNFRSF25-216ENST00000502588 DLG5Q8TDM6 1919 aa30.47■■■□□ 2.47
TNFRSF25-216ENST00000502588 CYP19A1P11511 503 aaPredicted RBP30.47■■■□□ 2.47
TNFRSF25-216ENST00000502588 ZNF784Q8NCA9 323 aaPredicted RBP30.47■■■□□ 2.47
TNFRSF25-216ENST00000502588 CCDC87Q9NVE4 849 aa30.46■■■□□ 2.47
TNFRSF25-216ENST00000502588 NUDCQ9Y266 331 aa30.46■■■□□ 2.47
TNFRSF25-216ENST00000502588 NLGN1Q8N2Q7 840 aa30.45■■■□□ 2.47
TNFRSF25-216ENST00000502588 USP42Q9H9J4 1324 aaKnown RBP30.45■■■□□ 2.46
TNFRSF25-216ENST00000502588 CEMIPQ8WUJ3 1361 aa30.44■■■□□ 2.46
TNFRSF25-216ENST00000502588 C10orf71Q711Q0 1435 aa30.44■■■□□ 2.46
TNFRSF25-216ENST00000502588 BRCA1P38398 1863 aaKnown RBP30.44■■■□□ 2.46
TNFRSF25-216ENST00000502588 SOS1Q07889 1333 aaPredicted RBP30.44■■■□□ 2.46
TNFRSF25-216ENST00000502588 PXDNLA1KZ92 1463 aa30.44■■■□□ 2.46
TNFRSF25-216ENST00000502588 TEFQ10587 303 aa30.43■■■□□ 2.46
TNFRSF25-216ENST00000502588 ZBTB1Q9Y2K1 713 aa30.43■■■□□ 2.46
TNFRSF25-216ENST00000502588 FKBP8Q14318 412 aa30.42■■■□□ 2.46
TNFRSF25-216ENST00000502588 ZNF496Q96IT1 587 aaPredicted RBP30.41■■■□□ 2.46
TNFRSF25-216ENST00000502588 AFDNP55196 1824 aaKnown RBP30.4■■■□□ 2.46
TNFRSF25-216ENST00000502588 GRIN3BO60391 1043 aa30.39■■■□□ 2.46
TNFRSF25-216ENST00000502588 ZNF790Q6PG37 636 aa30.39■■■□□ 2.46
TNFRSF25-216ENST00000502588 TTC5Q8N0Z6 440 aa30.39■■■□□ 2.46
TNFRSF25-216ENST00000502588 KCNQ3O43525 872 aa30.38■■■□□ 2.45
TNFRSF25-216ENST00000502588 FCHSD2O94868 740 aa30.38■■■□□ 2.45
TNFRSF25-216ENST00000502588 DDR1Q08345 913 aa30.38■■■□□ 2.45
TNFRSF25-216ENST00000502588 VSIG10Q8N0Z9 540 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms