RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 SHANK3Q9BYB0 1731 aa11.67□□□□□ -0.54
LINC01550-202ENST00000502187 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
LINC01550-202ENST00000502187 SLIT2O94813 1529 aa11.66□□□□□ -0.54
LINC01550-202ENST00000502187 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
LINC01550-202ENST00000502187 FNBP4Q8N3X1 1017 aaPredicted RBP11.66□□□□□ -0.54
LINC01550-202ENST00000502187 IL17REQ8NFR9 667 aa11.66□□□□□ -0.54
LINC01550-202ENST00000502187 AFF2P51816 1311 aa11.66□□□□□ -0.54
LINC01550-202ENST00000502187 CHL1O00533 1208 aa11.66□□□□□ -0.54
LINC01550-202ENST00000502187 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.66□□□□□ -0.54
LINC01550-202ENST00000502187 SIPA1L3O60292 1781 aaPredicted RBP11.66□□□□□ -0.54
LINC01550-202ENST00000502187 MPRIPQ6WCQ1 1025 aa11.65□□□□□ -0.54
LINC01550-202ENST00000502187 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.54
LINC01550-202ENST00000502187 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
LINC01550-202ENST00000502187 KDM3BQ7LBC6 1761 aa11.65□□□□□ -0.54
LINC01550-202ENST00000502187 PCDH11XQ9BZA7 1347 aa11.64□□□□□ -0.55
LINC01550-202ENST00000502187 PCDH11YQ9BZA8 1340 aa11.64□□□□□ -0.55
LINC01550-202ENST00000502187 RNMTO43148 476 aaKnown RBP11.64□□□□□ -0.55
LINC01550-202ENST00000502187 PHKG2P15735 406 aa11.64□□□□□ -0.55
LINC01550-202ENST00000502187 RARSP54136 660 aaKnown RBP11.64□□□□□ -0.55
LINC01550-202ENST00000502187 TEFQ10587 303 aa11.64□□□□□ -0.55
LINC01550-202ENST00000502187 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
LINC01550-202ENST00000502187 ZCRB1Q8TBF4 217 aaKnown RBP11.64□□□□□ -0.55
LINC01550-202ENST00000502187 LGR6Q9HBX8 967 aa11.64□□□□□ -0.55
LINC01550-202ENST00000502187 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.64□□□□□ -0.55
LINC01550-202ENST00000502187 BCAR3O75815 825 aa11.63□□□□□ -0.55
LINC01550-202ENST00000502187 BABAM1Q9NWV8 329 aa11.63□□□□□ -0.55
LINC01550-202ENST00000502187 SPATA31A1Q5TZJ5 1347 aa11.63□□□□□ -0.55
LINC01550-202ENST00000502187 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
LINC01550-202ENST00000502187 KDM6AO15550 1401 aaPredicted RBP11.63□□□□□ -0.55
LINC01550-202ENST00000502187 HSP90AB1P08238 724 aaKnown RBP11.63□□□□□ -0.55
LINC01550-202ENST00000502187 DDX54Q8TDD1 881 aaKnown RBP11.63□□□□□ -0.55
LINC01550-202ENST00000502187 ZNF428Q96B54 188 aa11.63□□□□□ -0.55
LINC01550-202ENST00000502187 BCL9LQ86UU0 1499 aa11.63□□□□□ -0.55
LINC01550-202ENST00000502187 SPATA31A5Q5VU36 1347 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 SPATA31A7Q8IWB4 1347 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 CYP27B1O15528 508 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 PLIN1O60240 522 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 VPS72Q15906 364 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 TWISTNBQ3B726 338 aaPredicted RBP11.62□□□□□ -0.55
LINC01550-202ENST00000502187 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 A0A0G2JS52 829 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 CANXP27824 592 aaKnown RBP11.62□□□□□ -0.55
LINC01550-202ENST00000502187 MYT1Q01538 1121 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 BCL2L13Q9BXK5 485 aa11.62□□□□□ -0.55
LINC01550-202ENST00000502187 QTRT2Q9H974 415 aaKnown RBP11.62□□□□□ -0.55
LINC01550-202ENST00000502187 MRC1P22897 1456 aa11.61□□□□□ -0.55
LINC01550-202ENST00000502187 FAM98CQ17RN3 349 aaKnown RBP11.61□□□□□ -0.55
LINC01550-202ENST00000502187 TSPYL6Q8N831 410 aa11.61□□□□□ -0.55
LINC01550-202ENST00000502187 C8orf58Q8NAV2 365 aa11.61□□□□□ -0.55
LINC01550-202ENST00000502187 DCAF5Q96JK2 942 aa11.61□□□□□ -0.55
LINC01550-202ENST00000502187 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
LINC01550-202ENST00000502187 ELL2O00472 640 aaPredicted RBP11.61□□□□□ -0.55
LINC01550-202ENST00000502187 VAMP4O75379 141 aa11.61□□□□□ -0.55
LINC01550-202ENST00000502187 ALDH1L2Q3SY69 923 aa11.61□□□□□ -0.55
LINC01550-202ENST00000502187 THRAP3Q9Y2W1 955 aaKnown RBP11.61□□□□□ -0.55
LINC01550-202ENST00000502187 EXOC5O00471 708 aa11.6□□□□□ -0.55
LINC01550-202ENST00000502187 ARID3AQ99856 593 aa11.6□□□□□ -0.55
LINC01550-202ENST00000502187 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
LINC01550-202ENST00000502187 SSH1Q8WYL5 1049 aa11.6□□□□□ -0.55
LINC01550-202ENST00000502187 FRAT1Q92837 279 aaPredicted RBP11.6□□□□□ -0.55
LINC01550-202ENST00000502187 GJD4Q96KN9 370 aaPredicted RBP11.6□□□□□ -0.55
LINC01550-202ENST00000502187 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
LINC01550-202ENST00000502187 ZNF219Q9P2Y4 722 aaPredicted RBP11.6□□□□□ -0.55
LINC01550-202ENST00000502187 TRPC5Q9UL62 973 aaPredicted RBP11.6□□□□□ -0.55
LINC01550-202ENST00000502187 TNS2Q63HR2 1409 aa11.59□□□□□ -0.55
LINC01550-202ENST00000502187 KRT24Q2M2I5 525 aa11.59□□□□□ -0.55
LINC01550-202ENST00000502187 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
LINC01550-202ENST00000502187 ILDR1Q86SU0 546 aaPredicted RBP11.59□□□□□ -0.55
LINC01550-202ENST00000502187 SLC52A2Q9HAB3 445 aa11.59□□□□□ -0.55
LINC01550-202ENST00000502187 KAT6BQ8WYB5 2073 aa11.59□□□□□ -0.55
LINC01550-202ENST00000502187 KIF16BQ96L93 1317 aa11.58□□□□□ -0.55
LINC01550-202ENST00000502187 TOGARAM1Q9Y4F4 1720 aa11.58□□□□□ -0.56
LINC01550-202ENST00000502187 DDB1Q16531 1140 aa11.58□□□□□ -0.56
LINC01550-202ENST00000502187 BARGINQ6ZT62 677 aa11.58□□□□□ -0.56
LINC01550-202ENST00000502187 SOS1Q07889 1333 aaPredicted RBP11.57□□□□□ -0.56
LINC01550-202ENST00000502187 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
LINC01550-202ENST00000502187 CABP4P57796 275 aa11.57□□□□□ -0.56
LINC01550-202ENST00000502187 ZKSCAN2Q63HK3 967 aa11.57□□□□□ -0.56
LINC01550-202ENST00000502187 ZNF772Q68DY9 489 aaPredicted RBP11.57□□□□□ -0.56
LINC01550-202ENST00000502187 ITGB4P16144 1822 aa11.56□□□□□ -0.56
LINC01550-202ENST00000502187 EIF4A1P60842 406 aaKnown RBP11.56□□□□□ -0.56
LINC01550-202ENST00000502187 C20orf194Q5TEA3 1177 aa11.56□□□□□ -0.56
LINC01550-202ENST00000502187 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
LINC01550-202ENST00000502187 PDE3AQ14432 1141 aa11.55□□□□□ -0.56
LINC01550-202ENST00000502187 MRPL50Q8N5N7 158 aaKnown RBP11.55□□□□□ -0.56
LINC01550-202ENST00000502187 NFATC2IPQ8NCF5 419 aa11.55□□□□□ -0.56
LINC01550-202ENST00000502187 CRBNQ96SW2 442 aa11.55□□□□□ -0.56
LINC01550-202ENST00000502187 ERVV-2B6SEH9 535 aa11.55□□□□□ -0.56
LINC01550-202ENST00000502187 TCERG1O14776 1098 aaKnown RBP11.55□□□□□ -0.56
LINC01550-202ENST00000502187 EXOC6Q8TAG9 804 aa11.55□□□□□ -0.56
LINC01550-202ENST00000502187 DOT1LQ8TEK3 1739 aa11.55□□□□□ -0.56
LINC01550-202ENST00000502187 PAPPAQ13219 1627 aa11.55□□□□□ -0.56
LINC01550-202ENST00000502187 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
LINC01550-202ENST00000502187 KCNQ3O43525 872 aa11.54□□□□□ -0.56
LINC01550-202ENST00000502187 MS4A1P11836 297 aa11.54□□□□□ -0.56
LINC01550-202ENST00000502187 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
LINC01550-202ENST00000502187 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
LINC01550-202ENST00000502187 HOXB7P09629 217 aa11.54□□□□□ -0.56
LINC01550-202ENST00000502187 FTSJ3Q8IY81 847 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms