RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	MARCH10	Q8NA82	808 aa	Predicted RBP	28.91	■■■□□ 2.22
RAP1B-213	ENST00000501412	KDM3B	Q7LBC6	1761 aa		28.9	■■■□□ 2.22
RAP1B-213	ENST00000501412	SLC52A2	Q9HAB3	445 aa		28.9	■■■□□ 2.22
RAP1B-213	ENST00000501412	TEF	Q10587	303 aa		28.89	■■■□□ 2.22
RAP1B-213	ENST00000501412	MIS18A	Q9NYP9	233 aa		28.89	■■■□□ 2.22
RAP1B-213	ENST00000501412	RGS12	O14924	1447 aa		28.89	■■■□□ 2.21
RAP1B-213	ENST00000501412	ERVV-2	B6SEH9	535 aa		28.88	■■■□□ 2.21
RAP1B-213	ENST00000501412	TSPYL4	Q9UJ04	414 aa		28.86	■■■□□ 2.21
RAP1B-213	ENST00000501412	EXOSC9	Q06265	439 aa	Known RBP	28.85	■■■□□ 2.21
RAP1B-213	ENST00000501412	SEPT12	Q8IYM1	358 aa		28.85	■■■□□ 2.21
RAP1B-213	ENST00000501412	NFATC2IP	Q8NCF5	419 aa		28.85	■■■□□ 2.21
RAP1B-213	ENST00000501412	ITGB4	P16144	1822 aa		28.83	■■■□□ 2.21
RAP1B-213	ENST00000501412	DOT1L	Q8TEK3	1739 aa		28.83	■■■□□ 2.21
RAP1B-213	ENST00000501412	BTBD11	A6QL63	1104 aa		28.82	■■■□□ 2.2
RAP1B-213	ENST00000501412	CABP4	P57796	275 aa		28.82	■■■□□ 2.2
RAP1B-213	ENST00000501412	PAPPA	Q13219	1627 aa		28.8	■■■□□ 2.2
RAP1B-213	ENST00000501412		A0A0G2JS52	829 aa		28.8	■■■□□ 2.2
RAP1B-213	ENST00000501412	MYT1	Q01538	1121 aa		28.8	■■■□□ 2.2
RAP1B-213	ENST00000501412	KCNQ3	O43525	872 aa		28.79	■■■□□ 2.2
RAP1B-213	ENST00000501412	CT47B1	P0C2W7	299 aa	Predicted RBP	28.79	■■■□□ 2.2
RAP1B-213	ENST00000501412	TSPYL6	Q8N831	410 aa		28.79	■■■□□ 2.2
RAP1B-213	ENST00000501412	C8orf58	Q8NAV2	365 aa		28.79	■■■□□ 2.2
RAP1B-213	ENST00000501412	BRWD3	Q6RI45	1802 aa		28.79	■■■□□ 2.2
RAP1B-213	ENST00000501412	BCL9	O00512	1426 aa		28.79	■■■□□ 2.2
RAP1B-213	ENST00000501412	KRT24	Q2M2I5	525 aa		28.78	■■■□□ 2.2
RAP1B-213	ENST00000501412	RCAN3	Q9UKA8	241 aa		28.78	■■■□□ 2.2
RAP1B-213	ENST00000501412	EIF4A1	P60842	406 aa	Known RBP	28.77	■■■□□ 2.2
RAP1B-213	ENST00000501412	HEG1	Q9ULI3	1381 aa		28.76	■■■□□ 2.19
RAP1B-213	ENST00000501412	VAMP4	O75379	141 aa		28.75	■■■□□ 2.19
RAP1B-213	ENST00000501412	ZNF790	Q6PG37	636 aa		28.75	■■■□□ 2.19
RAP1B-213	ENST00000501412	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
RAP1B-213	ENST00000501412	UBR2	Q8IWV8	1755 aa		28.75	■■■□□ 2.19
RAP1B-213	ENST00000501412	SLC39A6	Q13433	755 aa		28.74	■■■□□ 2.19
RAP1B-213	ENST00000501412	PIGB	Q92521	554 aa		28.74	■■■□□ 2.19
RAP1B-213	ENST00000501412	TMOD3	Q9NYL9	352 aa		28.74	■■■□□ 2.19
RAP1B-213	ENST00000501412	PRIM1	P49642	420 aa	Known RBP	28.72	■■■□□ 2.19
RAP1B-213	ENST00000501412	TWISTNB	Q3B726	338 aa	Predicted RBP	28.72	■■■□□ 2.19
RAP1B-213	ENST00000501412	RARS	P54136	660 aa	Known RBP	28.71	■■■□□ 2.19
RAP1B-213	ENST00000501412	KCP	Q6ZWJ8	1503 aa		28.71	■■■□□ 2.19
RAP1B-213	ENST00000501412	RNF123	Q5XPI4	1314 aa		28.71	■■■□□ 2.19
RAP1B-213	ENST00000501412	ELL2	O00472	640 aa	Predicted RBP	28.7	■■■□□ 2.18
RAP1B-213	ENST00000501412	ZNF428	Q96B54	188 aa		28.69	■■■□□ 2.18
RAP1B-213	ENST00000501412	ACSBG1	Q96GR2	724 aa		28.69	■■■□□ 2.18
RAP1B-213	ENST00000501412	SOS1	Q07889	1333 aa	Predicted RBP	28.69	■■■□□ 2.18
RAP1B-213	ENST00000501412	KAT6B	Q8WYB5	2073 aa		28.69	■■■□□ 2.18
RAP1B-213	ENST00000501412	SBF2	Q86WG5	1849 aa		28.69	■■■□□ 2.18
RAP1B-213	ENST00000501412	NHS	Q6T4R5	1651 aa		28.68	■■■□□ 2.18
RAP1B-213	ENST00000501412	FAM182B	Q5T319	152 aa		28.68	■■■□□ 2.18
RAP1B-213	ENST00000501412	SUPT16H	Q9Y5B9	1047 aa	Known RBP	28.68	■■■□□ 2.18
RAP1B-213	ENST00000501412	KRT27	Q7Z3Y8	459 aa		28.67	■■■□□ 2.18
RAP1B-213	ENST00000501412	ZNF496	Q96IT1	587 aa	Predicted RBP	28.67	■■■□□ 2.18
RAP1B-213	ENST00000501412	ATG3	Q9NT62	314 aa		28.66	■■■□□ 2.18
RAP1B-213	ENST00000501412	KCNQ2	O43526	872 aa		28.66	■■■□□ 2.18
RAP1B-213	ENST00000501412	GIGYF1	O75420	1035 aa	Predicted RBP	28.66	■■■□□ 2.18
RAP1B-213	ENST00000501412	HOXB7	P09629	217 aa		28.66	■■■□□ 2.18
RAP1B-213	ENST00000501412	SYTL4	Q96C24	671 aa	Predicted RBP	28.66	■■■□□ 2.18
RAP1B-213	ENST00000501412	ASAP1	Q9ULH1	1129 aa		28.66	■■■□□ 2.18
RAP1B-213	ENST00000501412	C5	P01031	1676 aa		28.65	■■■□□ 2.18
RAP1B-213	ENST00000501412	BCAR3	O75815	825 aa		28.65	■■■□□ 2.18
RAP1B-213	ENST00000501412	TTC5	Q8N0Z6	440 aa		28.65	■■■□□ 2.18
RAP1B-213	ENST00000501412	SSH1	Q8WYL5	1049 aa		28.65	■■■□□ 2.18
RAP1B-213	ENST00000501412	EP400	Q96L91	3159 aa		28.64	■■■□□ 2.18
RAP1B-213	ENST00000501412	ALDH1L2	Q3SY69	923 aa		28.64	■■■□□ 2.17
RAP1B-213	ENST00000501412	FMNL2	Q96PY5	1086 aa		28.63	■■■□□ 2.17
RAP1B-213	ENST00000501412	PRAMEF22	A3QJZ6	481 aa		28.6	■■■□□ 2.17
RAP1B-213	ENST00000501412	BRPF1	P55201	1214 aa	Predicted RBP	28.6	■■■□□ 2.17
RAP1B-213	ENST00000501412	PTF1A	Q7RTS3	328 aa		28.6	■■■□□ 2.17
RAP1B-213	ENST00000501412	BCL2L13	Q9BXK5	485 aa		28.59	■■■□□ 2.17
RAP1B-213	ENST00000501412	BTAF1	O14981	1849 aa		28.59	■■■□□ 2.17
RAP1B-213	ENST00000501412	RRP1	P56182	461 aa	Known RBP	28.59	■■■□□ 2.17
RAP1B-213	ENST00000501412	FAM196A	Q6ZSG2	479 aa		28.59	■■■□□ 2.17
RAP1B-213	ENST00000501412	LAMB4	A4D0S4	1761 aa		28.58	■■■□□ 2.17
RAP1B-213	ENST00000501412	SNRPA1	P09661	255 aa	Known RBP	28.57	■■■□□ 2.16
RAP1B-213	ENST00000501412	MRPL50	Q8N5N7	158 aa	Known RBP	28.57	■■■□□ 2.16
RAP1B-213	ENST00000501412	SMC4	Q9NTJ3	1288 aa		28.57	■■■□□ 2.16
RAP1B-213	ENST00000501412	PTCD1	O75127	700 aa	Known RBP	28.56	■■■□□ 2.16
RAP1B-213	ENST00000501412	TCERG1	O14776	1098 aa	Known RBP	28.55	■■■□□ 2.16
RAP1B-213	ENST00000501412	SLC4A9	Q96Q91	983 aa		28.55	■■■□□ 2.16
RAP1B-213	ENST00000501412	HDGFL1	Q5TGJ6	251 aa		28.54	■■■□□ 2.16
RAP1B-213	ENST00000501412	CCDC30	Q5VVM6	783 aa		28.54	■■■□□ 2.16
RAP1B-213	ENST00000501412	VSIG10	Q8N0Z9	540 aa		28.54	■■■□□ 2.16
RAP1B-213	ENST00000501412	CIC	Q96RK0	1608 aa	Predicted RBP	28.54	■■■□□ 2.16
RAP1B-213	ENST00000501412	CACNA1F	O60840	1977 aa		28.53	■■■□□ 2.16
RAP1B-213	ENST00000501412	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.53	■■■□□ 2.16
RAP1B-213	ENST00000501412	USP16	Q9Y5T5	823 aa		28.53	■■■□□ 2.16
RAP1B-213	ENST00000501412	PALLD	Q8WX93	1383 aa		28.52	■■■□□ 2.16
RAP1B-213	ENST00000501412	PLIN1	O60240	522 aa		28.52	■■■□□ 2.16
RAP1B-213	ENST00000501412	TJP1	Q07157	1748 aa		28.51	■■■□□ 2.16
RAP1B-213	ENST00000501412	ZNF831	Q5JPB2	1677 aa		28.51	■■■□□ 2.15
RAP1B-213	ENST00000501412	EIF2S2	P20042	333 aa	Known RBP	28.51	■■■□□ 2.15
RAP1B-213	ENST00000501412	NECTIN2	Q92692	538 aa		28.51	■■■□□ 2.15
RAP1B-213	ENST00000501412	SMARCC1	Q92922	1105 aa	Predicted RBP	28.51	■■■□□ 2.15
RAP1B-213	ENST00000501412	CHMP4A	Q9BY43	222 aa		28.5	■■■□□ 2.15
RAP1B-213	ENST00000501412	RBM42	Q9BTD8	480 aa	Known RBP	28.49	■■■□□ 2.15
RAP1B-213	ENST00000501412	KIF16B	Q96L93	1317 aa		28.49	■■■□□ 2.15
RAP1B-213	ENST00000501412	SLC4A2	P04920	1241 aa		28.48	■■■□□ 2.15
RAP1B-213	ENST00000501412	PDIA6	Q15084	440 aa		28.47	■■■□□ 2.15
RAP1B-213	ENST00000501412	STK31	Q9BXU1	1019 aa		28.47	■■■□□ 2.15
RAP1B-213	ENST00000501412	CHPF2	Q9P2E5	772 aa		28.47	■■■□□ 2.15
RAP1B-213	ENST00000501412	NOB1	Q9ULX3	412 aa	Known RBP	28.47	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms