RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 EIF4A1P60842 406 aaKnown RBP23.09■■□□□ 1.29
LINC00535-201ENST00000501400 PDZRN3Q9UPQ7 1066 aa23.09■■□□□ 1.29
LINC00535-201ENST00000501400 KCNQ3O43525 872 aa23.08■■□□□ 1.29
LINC00535-201ENST00000501400 PARP4Q9UKK3 1724 aaKnown RBP23.08■■□□□ 1.29
LINC00535-201ENST00000501400 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.29
LINC00535-201ENST00000501400 TATP17735 454 aaPredicted RBP23.08■■□□□ 1.28
LINC00535-201ENST00000501400 CCDC30Q5VVM6 783 aa23.08■■□□□ 1.28
LINC00535-201ENST00000501400 C1orf115Q9H7X2 142 aa23.08■■□□□ 1.28
LINC00535-201ENST00000501400 CHMP4BQ9H444 224 aaKnown RBP23.07■■□□□ 1.28
LINC00535-201ENST00000501400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.07■■□□□ 1.28
LINC00535-201ENST00000501400 WDR17Q8IZU2 1322 aa23.07■■□□□ 1.28
LINC00535-201ENST00000501400 SMC5Q8IY18 1101 aa23.06■■□□□ 1.28
LINC00535-201ENST00000501400 STK31Q9BXU1 1019 aa23.06■■□□□ 1.28
LINC00535-201ENST00000501400 BTBD11A6QL63 1104 aa23.06■■□□□ 1.28
LINC00535-201ENST00000501400 MRC1P22897 1456 aa23.05■■□□□ 1.28
LINC00535-201ENST00000501400 PHKG2P15735 406 aa23.05■■□□□ 1.28
LINC00535-201ENST00000501400 NECTIN2Q92692 538 aa23.05■■□□□ 1.28
LINC00535-201ENST00000501400 C8orf34Q49A92 452 aa23.04■■□□□ 1.28
LINC00535-201ENST00000501400 HOXB7P09629 217 aa23.04■■□□□ 1.28
LINC00535-201ENST00000501400 FLIIQ13045 1269 aa23.04■■□□□ 1.28
LINC00535-201ENST00000501400 SPG7Q9UQ90 795 aa23.04■■□□□ 1.28
LINC00535-201ENST00000501400 ATP10DQ9P241 1426 aa23.04■■□□□ 1.28
LINC00535-201ENST00000501400 HEG1Q9ULI3 1381 aa23.03■■□□□ 1.28
LINC00535-201ENST00000501400 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
LINC00535-201ENST00000501400 SIRT2Q8IXJ6 389 aa23.03■■□□□ 1.28
LINC00535-201ENST00000501400 F6X3S4 739 aa23.02■■□□□ 1.28
LINC00535-201ENST00000501400 COL22A1Q8NFW1 1626 aaPredicted RBP23.02■■□□□ 1.28
LINC00535-201ENST00000501400 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
LINC00535-201ENST00000501400 FAM161AQ3B820 660 aa23.02■■□□□ 1.28
LINC00535-201ENST00000501400 CYP27B1O15528 508 aa23.01■■□□□ 1.27
LINC00535-201ENST00000501400 PXDNLA1KZ92 1463 aa23■■□□□ 1.27
LINC00535-201ENST00000501400 C5P01031 1676 aa23■■□□□ 1.27
LINC00535-201ENST00000501400 IFNL2Q8IZJ0 200 aa22.99■■□□□ 1.27
LINC00535-201ENST00000501400 COL16A1Q07092 1604 aaPredicted RBP22.99■■□□□ 1.27
LINC00535-201ENST00000501400 MEIS3Q99687 375 aa22.98■■□□□ 1.27
LINC00535-201ENST00000501400 FKBP5Q13451 457 aaPredicted RBP22.98■■□□□ 1.27
LINC00535-201ENST00000501400 TOM1L2Q6ZVM7 507 aa22.98■■□□□ 1.27
LINC00535-201ENST00000501400 SLC52A2Q9HAB3 445 aa22.98■■□□□ 1.27
LINC00535-201ENST00000501400 CCT4P50991 539 aaKnown RBP22.96■■□□□ 1.27
LINC00535-201ENST00000501400 EIF2S2P20042 333 aaKnown RBP22.96■■□□□ 1.27
LINC00535-201ENST00000501400 SLC4A10Q6U841 1118 aa22.96■■□□□ 1.27
LINC00535-201ENST00000501400 PHAXQ9H814 394 aaKnown RBP22.96■■□□□ 1.27
LINC00535-201ENST00000501400 CHPF2Q9P2E5 772 aa22.96■■□□□ 1.27
LINC00535-201ENST00000501400 COL14A1Q05707 1796 aaKnown RBP22.96■■□□□ 1.27
LINC00535-201ENST00000501400 GLI3P10071 1580 aa22.95■■□□□ 1.27
LINC00535-201ENST00000501400 GIGYF1O75420 1035 aaPredicted RBP22.95■■□□□ 1.26
LINC00535-201ENST00000501400 NUCB1Q02818 461 aa22.95■■□□□ 1.26
LINC00535-201ENST00000501400 CARD10Q9BWT7 1032 aa22.95■■□□□ 1.26
LINC00535-201ENST00000501400 MSH5O43196 834 aa22.94■■□□□ 1.26
LINC00535-201ENST00000501400 LARP1Q6PKG0 1096 aaKnown RBP22.94■■□□□ 1.26
LINC00535-201ENST00000501400 DCAF5Q96JK2 942 aa22.94■■□□□ 1.26
LINC00535-201ENST00000501400 PRAMEF22A3QJZ6 481 aa22.93■■□□□ 1.26
LINC00535-201ENST00000501400 CEP85Q6P2H3 762 aa22.92■■□□□ 1.26
LINC00535-201ENST00000501400 ANKRD44Q8N8A2 993 aa22.92■■□□□ 1.26
LINC00535-201ENST00000501400 GCC1Q96CN9 775 aa22.92■■□□□ 1.26
LINC00535-201ENST00000501400 SLC39A6Q13433 755 aa22.92■■□□□ 1.26
LINC00535-201ENST00000501400 ZNF790Q6PG37 636 aa22.92■■□□□ 1.26
LINC00535-201ENST00000501400 NFATC2IPQ8NCF5 419 aa22.92■■□□□ 1.26
LINC00535-201ENST00000501400 STRN4Q9NRL3 753 aa22.92■■□□□ 1.26
LINC00535-201ENST00000501400 PHLPP1O60346 1717 aa22.92■■□□□ 1.26
LINC00535-201ENST00000501400 PCDH11XQ9BZA7 1347 aa22.91■■□□□ 1.26
LINC00535-201ENST00000501400 PCDH11YQ9BZA8 1340 aa22.91■■□□□ 1.26
LINC00535-201ENST00000501400 ANXA1P04083 346 aa22.9■■□□□ 1.26
LINC00535-201ENST00000501400 HSP90AB1P08238 724 aaKnown RBP22.9■■□□□ 1.26
LINC00535-201ENST00000501400 CHD1LQ86WJ1 897 aa22.9■■□□□ 1.26
LINC00535-201ENST00000501400 ANP32AP39687 249 aaKnown RBP22.89■■□□□ 1.25
LINC00535-201ENST00000501400 ZCRB1Q8TBF4 217 aaKnown RBP22.89■■□□□ 1.25
LINC00535-201ENST00000501400 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.25
LINC00535-201ENST00000501400 LNPKQ9C0E8 428 aa22.89■■□□□ 1.25
LINC00535-201ENST00000501400 PAPPAQ13219 1627 aa22.89■■□□□ 1.25
LINC00535-201ENST00000501400 IL2RBP14784 551 aa22.88■■□□□ 1.25
LINC00535-201ENST00000501400 TOGARAM1Q9Y4F4 1720 aa22.88■■□□□ 1.25
LINC00535-201ENST00000501400 PROSER3Q2NL68 480 aa22.88■■□□□ 1.25
LINC00535-201ENST00000501400 RPAP2Q8IXW5 612 aaPredicted RBP22.88■■□□□ 1.25
LINC00535-201ENST00000501400 PLCH1Q4KWH8 1693 aa22.87■■□□□ 1.25
LINC00535-201ENST00000501400 ADCY9O60503 1353 aa22.87■■□□□ 1.25
LINC00535-201ENST00000501400 NPM2Q86SE8 214 aaKnown RBP22.87■■□□□ 1.25
LINC00535-201ENST00000501400 DBF4Q9UBU7 674 aaPredicted RBP22.87■■□□□ 1.25
LINC00535-201ENST00000501400 UBR2Q8IWV8 1755 aa22.87■■□□□ 1.25
LINC00535-201ENST00000501400 LAMB4A4D0S4 1761 aa22.87■■□□□ 1.25
LINC00535-201ENST00000501400 EVA1CP58658 441 aa22.86■■□□□ 1.25
LINC00535-201ENST00000501400 BTG4Q9NY30 223 aa22.86■■□□□ 1.25
LINC00535-201ENST00000501400 DCTPP1Q9H773 170 aa22.86■■□□□ 1.25
LINC00535-201ENST00000501400 ANKRD45Q5TZF3 282 aa22.85■■□□□ 1.25
LINC00535-201ENST00000501400 WNK3Q9BYP7 1800 aa22.85■■□□□ 1.25
LINC00535-201ENST00000501400 ZNF496Q96IT1 587 aaPredicted RBP22.84■■□□□ 1.25
LINC00535-201ENST00000501400 DISP2A7MBM2 1401 aa22.83■■□□□ 1.25
LINC00535-201ENST00000501400 PI4KAP2A4QPH2 592 aa22.83■■□□□ 1.25
LINC00535-201ENST00000501400 PDIA6Q15084 440 aa22.83■■□□□ 1.25
LINC00535-201ENST00000501400 NKX1-1Q15270 411 aaPredicted RBP22.83■■□□□ 1.25
LINC00535-201ENST00000501400 PI4KAP1Q8N8J0 262 aa22.83■■□□□ 1.25
LINC00535-201ENST00000501400 GNAI2P04899 355 aa22.82■■□□□ 1.24
LINC00535-201ENST00000501400 CABP4P57796 275 aa22.82■■□□□ 1.24
LINC00535-201ENST00000501400 USP44Q9H0E7 712 aa22.82■■□□□ 1.24
LINC00535-201ENST00000501400 NRAPQ86VF7 1730 aa22.82■■□□□ 1.24
LINC00535-201ENST00000501400 GNAI3P08754 354 aa22.82■■□□□ 1.24
LINC00535-201ENST00000501400 DNAAF4Q8WXU2 420 aa22.82■■□□□ 1.24
LINC00535-201ENST00000501400 BEND3Q5T5X7 828 aa22.81■■□□□ 1.24
LINC00535-201ENST00000501400 SEC24BO95487 1268 aa22.8■■□□□ 1.24
LINC00535-201ENST00000501400 IPO9Q96P70 1041 aaKnown RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms