RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 NYAP1Q6ZVC0 841 aa8.42□□□□□ -1.06
SPTA1-209ENST00000498708 KIF1BO60333 1816 aa8.41□□□□□ -1.06
SPTA1-209ENST00000498708 SBF2Q86WG5 1849 aa8.41□□□□□ -1.06
SPTA1-209ENST00000498708 NRXN1Q9ULB1 1477 aa8.41□□□□□ -1.06
SPTA1-209ENST00000498708 PLSCR1O15162 318 aa8.41□□□□□ -1.06
SPTA1-209ENST00000498708 CHRNA2Q15822 529 aa8.41□□□□□ -1.06
SPTA1-209ENST00000498708 PMFBP1Q8TBY8 1022 aa8.41□□□□□ -1.06
SPTA1-209ENST00000498708 ARXQ96QS3 562 aa8.41□□□□□ -1.06
SPTA1-209ENST00000498708 PCNTO95613 3336 aa8.41□□□□□ -1.06
SPTA1-209ENST00000498708 RGPD3A6NKT7 1758 aaPredicted RBP8.4□□□□□ -1.06
SPTA1-209ENST00000498708 RGPD4Q7Z3J3 1758 aa8.4□□□□□ -1.06
SPTA1-209ENST00000498708 TRPM3Q9HCF6 1732 aaPredicted RBP8.4□□□□□ -1.06
SPTA1-209ENST00000498708 CRYBG1Q9Y4K1 1723 aa8.4□□□□□ -1.06
SPTA1-209ENST00000498708 BARGINQ6ZT62 677 aa8.4□□□□□ -1.06
SPTA1-209ENST00000498708 MTFR1LQ9H019 292 aa8.4□□□□□ -1.06
SPTA1-209ENST00000498708 PRDM11Q9NQV5 511 aa8.4□□□□□ -1.06
SPTA1-209ENST00000498708 SEPT9Q9UHD8 586 aaPredicted RBP8.4□□□□□ -1.06
SPTA1-209ENST00000498708 IFT172Q9UG01 1749 aa8.4□□□□□ -1.07
SPTA1-209ENST00000498708 ALS2Q96Q42 1657 aa8.4□□□□□ -1.07
SPTA1-209ENST00000498708 GRXCR2A6NFK2 248 aa8.39□□□□□ -1.07
SPTA1-209ENST00000498708 RGS20O76081 388 aa8.39□□□□□ -1.07
SPTA1-209ENST00000498708 BCAMP50895 628 aa8.39□□□□□ -1.07
SPTA1-209ENST00000498708 PRELPP51888 382 aa8.39□□□□□ -1.07
SPTA1-209ENST00000498708 TSR1Q2NL82 804 aaKnown RBP8.39□□□□□ -1.07
SPTA1-209ENST00000498708 DNAJC5GQ8N7S2 189 aa8.39□□□□□ -1.07
SPTA1-209ENST00000498708 ATP10DQ9P241 1426 aa8.38□□□□□ -1.07
SPTA1-209ENST00000498708 KIAA0232Q92628 1395 aa8.38□□□□□ -1.07
SPTA1-209ENST00000498708 MAP3K5Q99683 1374 aa8.38□□□□□ -1.07
SPTA1-209ENST00000498708 PEAK1Q9H792 1746 aa8.38□□□□□ -1.07
SPTA1-209ENST00000498708 SLC15A2Q16348 729 aa8.38□□□□□ -1.07
SPTA1-209ENST00000498708 TMEM132EQ6IEE7 984 aa8.38□□□□□ -1.07
SPTA1-209ENST00000498708 PRSS12P56730 875 aa8.37□□□□□ -1.07
SPTA1-209ENST00000498708 LARP1Q6PKG0 1096 aaKnown RBP8.37□□□□□ -1.07
SPTA1-209ENST00000498708 LRCH3Q96II8 777 aa8.37□□□□□ -1.07
SPTA1-209ENST00000498708 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.37□□□□□ -1.07
SPTA1-209ENST00000498708 STK32BQ9NY57 414 aa8.37□□□□□ -1.07
SPTA1-209ENST00000498708 PPLO60437 1756 aa8.37□□□□□ -1.07
SPTA1-209ENST00000498708 YBX3P16989 372 aaKnown RBP eCLIP8.36□□□□□ -1.07
SPTA1-209ENST00000498708 EVA1CP58658 441 aa8.36□□□□□ -1.07
SPTA1-209ENST00000498708 ZC3H6P61129 1189 aaKnown RBP8.36□□□□□ -1.07
SPTA1-209ENST00000498708 TCP11L2Q8N4U5 519 aa8.36□□□□□ -1.07
SPTA1-209ENST00000498708 NLGN2Q8NFZ4 835 aa8.36□□□□□ -1.07
SPTA1-209ENST00000498708 ZNF526Q8TF50 670 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-209ENST00000498708 CDCA7LQ96GN5 454 aa8.36□□□□□ -1.07
SPTA1-209ENST00000498708 GPBP1L1Q9HC44 474 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-209ENST00000498708 TSKSQ9UJT2 592 aa8.36□□□□□ -1.07
SPTA1-209ENST00000498708 ABCC11Q96J66 1382 aa8.35□□□□□ -1.07
SPTA1-209ENST00000498708 ADGRF5Q8IZF2 1346 aa8.35□□□□□ -1.07
SPTA1-209ENST00000498708 KNDC1Q76NI1 1749 aa8.35□□□□□ -1.07
SPTA1-209ENST00000498708 PARP4Q9UKK3 1724 aaKnown RBP8.35□□□□□ -1.07
SPTA1-209ENST00000498708 TNS4Q8IZW8 715 aa8.35□□□□□ -1.07
SPTA1-209ENST00000498708 SSH2Q76I76 1423 aa8.35□□□□□ -1.07
SPTA1-209ENST00000498708 RPGRIP1LQ68CZ1 1315 aa8.34□□□□□ -1.07
SPTA1-209ENST00000498708 ITGBL1O95965 494 aaPredicted RBP8.34□□□□□ -1.07
SPTA1-209ENST00000498708 OSBPP22059 807 aa8.34□□□□□ -1.07
SPTA1-209ENST00000498708 TXNRD1Q16881 649 aa8.34□□□□□ -1.07
SPTA1-209ENST00000498708 WBP1LQ9NX94 342 aa8.34□□□□□ -1.07
SPTA1-209ENST00000498708 TSR3Q9UJK0 312 aaKnown RBP8.34□□□□□ -1.07
SPTA1-209ENST00000498708 ROCK1Q13464 1354 aa8.34□□□□□ -1.07
SPTA1-209ENST00000498708 OVOS2A0A0G2JMS6 1433 aa8.33□□□□□ -1.08
SPTA1-209ENST00000498708 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
SPTA1-209ENST00000498708 NBPF26B4DH59 902 aa8.33□□□□□ -1.08
SPTA1-209ENST00000498708 SAFB2Q14151 953 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPTA1-209ENST00000498708 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
SPTA1-209ENST00000498708 ARHGEF1Q92888 912 aaKnown RBP8.33□□□□□ -1.08
SPTA1-209ENST00000498708 RBM27Q9P2N5 1060 aaKnown RBP8.33□□□□□ -1.08
SPTA1-209ENST00000498708 PHRF1Q9P1Y6 1649 aaKnown RBP8.32□□□□□ -1.08
SPTA1-209ENST00000498708 ACIN1Q9UKV3 1341 aaKnown RBP8.32□□□□□ -1.08
SPTA1-209ENST00000498708 C11orf95C9JLR9 678 aaPredicted RBP8.32□□□□□ -1.08
SPTA1-209ENST00000498708 APLP1P51693 650 aa8.32□□□□□ -1.08
SPTA1-209ENST00000498708 HPS5Q9UPZ3 1129 aa8.32□□□□□ -1.08
SPTA1-209ENST00000498708 GPRASP1Q5JY77 1395 aa8.32□□□□□ -1.08
SPTA1-209ENST00000498708 ATP7BP35670 1465 aa8.32□□□□□ -1.08
SPTA1-209ENST00000498708 YTHDC2Q9H6S0 1430 aaKnown RBP8.31□□□□□ -1.08
SPTA1-209ENST00000498708 GRIN3BO60391 1043 aa8.31□□□□□ -1.08
SPTA1-209ENST00000498708 PRIM1P49642 420 aaKnown RBP8.31□□□□□ -1.08
SPTA1-209ENST00000498708 NUTM2GQ5VZR2 741 aa8.31□□□□□ -1.08
SPTA1-209ENST00000498708 TSHZ2Q9NRE2 1034 aa8.31□□□□□ -1.08
SPTA1-209ENST00000498708 THRAP3Q9Y2W1 955 aaKnown RBP8.31□□□□□ -1.08
SPTA1-209ENST00000498708 ADCY9O60503 1353 aa8.31□□□□□ -1.08
SPTA1-209ENST00000498708 LRRC37A3O60309 1634 aa8.3□□□□□ -1.08
SPTA1-209ENST00000498708 HTRA3P83110 453 aa8.3□□□□□ -1.08
SPTA1-209ENST00000498708 MARCH10Q8NA82 808 aaPredicted RBP8.3□□□□□ -1.08
SPTA1-209ENST00000498708 TATDN2Q93075 761 aa8.3□□□□□ -1.08
SPTA1-209ENST00000498708 SIRT1Q96EB6 747 aa8.3□□□□□ -1.08
SPTA1-209ENST00000498708 PRR36Q9H6K5 1346 aa8.29□□□□□ -1.08
SPTA1-209ENST00000498708 PPP4CP60510 307 aa8.29□□□□□ -1.08
SPTA1-209ENST00000498708 KCNC4Q03721 635 aa8.29□□□□□ -1.08
SPTA1-209ENST00000498708 ZNF827Q17R98 1081 aa8.29□□□□□ -1.08
SPTA1-209ENST00000498708 LMO7Q8WWI1 1683 aa8.29□□□□□ -1.08
SPTA1-209ENST00000498708 COL24A1Q17RW2 1714 aa8.29□□□□□ -1.08
SPTA1-209ENST00000498708 ANKARQ7Z5J8 1434 aa8.29□□□□□ -1.08
SPTA1-209ENST00000498708 DHX57Q6P158 1386 aaKnown RBP8.28□□□□□ -1.08
SPTA1-209ENST00000498708 DDB1Q16531 1140 aa8.28□□□□□ -1.08
SPTA1-209ENST00000498708 PRAM1Q96QH2 718 aa8.28□□□□□ -1.08
SPTA1-209ENST00000498708 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
SPTA1-209ENST00000498708 PAPPAQ13219 1627 aa8.28□□□□□ -1.08
SPTA1-209ENST00000498708 SMAPO00193 183 aa8.27□□□□□ -1.09
SPTA1-209ENST00000498708 SAMD7Q7Z3H4 446 aa8.27□□□□□ -1.09
SPTA1-209ENST00000498708 JMYQ8N9B5 988 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms