RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 U2SURPO15042 1029 aaKnown RBP21.75■■□□□ 1.07
NR1H3-227ENST00000498548 MSL1Q68DK7 614 aa21.75■■□□□ 1.07
NR1H3-227ENST00000498548 AK7Q96M32 723 aa21.75■■□□□ 1.07
NR1H3-227ENST00000498548 RBM42Q9BTD8 480 aaKnown RBP21.75■■□□□ 1.07
NR1H3-227ENST00000498548 PHF14O94880 888 aa21.74■■□□□ 1.07
NR1H3-227ENST00000498548 KLHL34Q8N239 644 aa21.74■■□□□ 1.07
NR1H3-227ENST00000498548 COL3A1P02461 1466 aaPredicted RBP21.73■■□□□ 1.07
NR1H3-227ENST00000498548 POLD1P28340 1107 aa21.73■■□□□ 1.07
NR1H3-227ENST00000498548 NFATC2IPQ8NCF5 419 aa21.73■■□□□ 1.07
NR1H3-227ENST00000498548 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
NR1H3-227ENST00000498548 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
NR1H3-227ENST00000498548 MTHFSDQ2M296 383 aaKnown RBP21.72■■□□□ 1.07
NR1H3-227ENST00000498548 AKAP4Q5JQC9 854 aa21.72■■□□□ 1.07
NR1H3-227ENST00000498548 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
NR1H3-227ENST00000498548 UBR3Q6ZT12 1888 aa21.71■■□□□ 1.07
NR1H3-227ENST00000498548 SCN11AQ9UI33 1791 aa21.71■■□□□ 1.07
NR1H3-227ENST00000498548 PPP2R1AP30153 589 aa21.7■■□□□ 1.06
NR1H3-227ENST00000498548 VIRMAQ69YN4 1812 aaKnown RBP21.7■■□□□ 1.06
NR1H3-227ENST00000498548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.69■■□□□ 1.06
NR1H3-227ENST00000498548 DCAF8L1A6NGE4 600 aa21.69■■□□□ 1.06
NR1H3-227ENST00000498548 PTCD1O75127 700 aaKnown RBP21.69■■□□□ 1.06
NR1H3-227ENST00000498548 HMGB2P26583 209 aaKnown RBP21.69■■□□□ 1.06
NR1H3-227ENST00000498548 FLAD1Q8NFF5 587 aa21.69■■□□□ 1.06
NR1H3-227ENST00000498548 GNPATO15228 680 aa21.68■■□□□ 1.06
NR1H3-227ENST00000498548 RNMTO43148 476 aaKnown RBP21.68■■□□□ 1.06
NR1H3-227ENST00000498548 CFAP53Q96M91 514 aa21.67■■□□□ 1.06
NR1H3-227ENST00000498548 SLC52A2Q9HAB3 445 aa21.65■■□□□ 1.06
NR1H3-227ENST00000498548 SSFA2P28290 1259 aa21.64■■□□□ 1.05
NR1H3-227ENST00000498548 SLC39A6Q13433 755 aa21.64■■□□□ 1.05
NR1H3-227ENST00000498548 NLGN2Q8NFZ4 835 aa21.63■■□□□ 1.05
NR1H3-227ENST00000498548 MYH14Q7Z406 1995 aaKnown RBP21.61■■□□□ 1.05
NR1H3-227ENST00000498548 COL5A3P25940 1745 aaPredicted RBP21.61■■□□□ 1.05
NR1H3-227ENST00000498548 ZNF831Q5JPB2 1677 aa21.61■■□□□ 1.05
NR1H3-227ENST00000498548 PRKAR2BP31323 418 aa21.61■■□□□ 1.05
NR1H3-227ENST00000498548 PHACTR3Q96KR7 559 aa21.61■■□□□ 1.05
NR1H3-227ENST00000498548 NUDCQ9Y266 331 aa21.61■■□□□ 1.05
NR1H3-227ENST00000498548 MAP3K5Q99683 1374 aa21.61■■□□□ 1.05
NR1H3-227ENST00000498548 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
NR1H3-227ENST00000498548 YY1P25490 414 aa21.6■■□□□ 1.05
NR1H3-227ENST00000498548 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
NR1H3-227ENST00000498548 RSPH6AQ9H0K4 717 aa21.6■■□□□ 1.05
NR1H3-227ENST00000498548 RTCBQ9Y3I0 505 aaKnown RBP21.6■■□□□ 1.05
NR1H3-227ENST00000498548 TRAPPC3LQ5T215 181 aa21.59■■□□□ 1.05
NR1H3-227ENST00000498548 RC3H1Q5TC82 1133 aaKnown RBP21.59■■□□□ 1.05
NR1H3-227ENST00000498548 PELP1Q8IZL8 1130 aaKnown RBP21.59■■□□□ 1.05
NR1H3-227ENST00000498548 IL17REQ8NFR9 667 aa21.58■■□□□ 1.05
NR1H3-227ENST00000498548 GAS2L2Q8NHY3 880 aa21.58■■□□□ 1.05
NR1H3-227ENST00000498548 ARHGEF1Q92888 912 aaKnown RBP21.58■■□□□ 1.05
NR1H3-227ENST00000498548 TJP1Q07157 1748 aa21.58■■□□□ 1.04
NR1H3-227ENST00000498548 CNTNAP4Q9C0A0 1308 aa21.57■■□□□ 1.04
NR1H3-227ENST00000498548 ADAMTS7Q9UKP4 1686 aa21.57■■□□□ 1.04
NR1H3-227ENST00000498548 GNAT3A8MTJ3 354 aa21.57■■□□□ 1.04
NR1H3-227ENST00000498548 RPS6KA4O75676 772 aa21.57■■□□□ 1.04
NR1H3-227ENST00000498548 CRKLP46109 303 aaKnown RBP21.57■■□□□ 1.04
NR1H3-227ENST00000498548 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
NR1H3-227ENST00000498548 GPR162Q16538 588 aa21.57■■□□□ 1.04
NR1H3-227ENST00000498548 DNAJC10Q8IXB1 793 aa21.57■■□□□ 1.04
NR1H3-227ENST00000498548 MRC1P22897 1456 aa21.57■■□□□ 1.04
NR1H3-227ENST00000498548 INTS5Q6P9B9 1019 aaKnown RBP21.54■■□□□ 1.04
NR1H3-227ENST00000498548 RFC4P35249 363 aa21.53■■□□□ 1.04
NR1H3-227ENST00000498548 TEFQ10587 303 aa21.53■■□□□ 1.04
NR1H3-227ENST00000498548 KCPQ6ZWJ8 1503 aa21.52■■□□□ 1.04
NR1H3-227ENST00000498548 FCHSD2O94868 740 aa21.51■■□□□ 1.03
NR1H3-227ENST00000498548 MMP10P09238 476 aa21.51■■□□□ 1.03
NR1H3-227ENST00000498548 SRP68Q9UHB9 627 aaKnown RBP21.51■■□□□ 1.03
NR1H3-227ENST00000498548 CD2APQ9Y5K6 639 aa21.51■■□□□ 1.03
NR1H3-227ENST00000498548 C4AP0C0L4 1744 aa21.5■■□□□ 1.03
NR1H3-227ENST00000498548 CYP19A1P11511 503 aaPredicted RBP21.5■■□□□ 1.03
NR1H3-227ENST00000498548 GYS1P13807 737 aa21.5■■□□□ 1.03
NR1H3-227ENST00000498548 ADRA2BP18089 450 aa21.5■■□□□ 1.03
NR1H3-227ENST00000498548 WWC3Q9ULE0 1092 aa21.5■■□□□ 1.03
NR1H3-227ENST00000498548 SIPA1L3O60292 1781 aaPredicted RBP21.49■■□□□ 1.03
NR1H3-227ENST00000498548 TTC5Q8N0Z6 440 aa21.49■■□□□ 1.03
NR1H3-227ENST00000498548 CCDC87Q9NVE4 849 aa21.49■■□□□ 1.03
NR1H3-227ENST00000498548 CICQ96RK0 1608 aaPredicted RBP21.48■■□□□ 1.03
NR1H3-227ENST00000498548 KCNQ3O43525 872 aa21.48■■□□□ 1.03
NR1H3-227ENST00000498548 YBX3P16989 372 aaKnown RBP eCLIP21.48■■□□□ 1.03
NR1H3-227ENST00000498548 DCTN1Q14203 1278 aa21.48■■□□□ 1.03
NR1H3-227ENST00000498548 MCM10Q7L590 875 aa21.48■■□□□ 1.03
NR1H3-227ENST00000498548 NLGN1Q8N2Q7 840 aa21.48■■□□□ 1.03
NR1H3-227ENST00000498548 CHD4Q14839 1912 aa21.48■■□□□ 1.03
NR1H3-227ENST00000498548 UBR2Q8IWV8 1755 aa21.48■■□□□ 1.03
NR1H3-227ENST00000498548 ZNF496Q96IT1 587 aaPredicted RBP21.47■■□□□ 1.03
NR1H3-227ENST00000498548 ZNF790Q6PG37 636 aa21.46■■□□□ 1.03
NR1H3-227ENST00000498548 ZBTB1Q9Y2K1 713 aa21.46■■□□□ 1.03
NR1H3-227ENST00000498548 CEMIPQ8WUJ3 1361 aa21.46■■□□□ 1.03
NR1H3-227ENST00000498548 BTBD11A6QL63 1104 aa21.45■■□□□ 1.02
NR1H3-227ENST00000498548 FKBP8Q14318 412 aa21.45■■□□□ 1.02
NR1H3-227ENST00000498548 VSIG10Q8N0Z9 540 aa21.45■■□□□ 1.02
NR1H3-227ENST00000498548 RTF1Q92541 710 aaKnown RBP21.45■■□□□ 1.02
NR1H3-227ENST00000498548 UTRNP46939 3433 aa21.45■■□□□ 1.02
NR1H3-227ENST00000498548 CANXP27824 592 aaKnown RBP21.44■■□□□ 1.02
NR1H3-227ENST00000498548 SOS1Q07889 1333 aaPredicted RBP21.44■■□□□ 1.02
NR1H3-227ENST00000498548 USP42Q9H9J4 1324 aaKnown RBP21.44■■□□□ 1.02
NR1H3-227ENST00000498548 RALBP1Q15311 655 aa21.43■■□□□ 1.02
NR1H3-227ENST00000498548 USPL1Q5W0Q7 1092 aa21.43■■□□□ 1.02
NR1H3-227ENST00000498548 PARP3Q9Y6F1 533 aa21.43■■□□□ 1.02
NR1H3-227ENST00000498548 DLG5Q8TDM6 1919 aa21.42■■□□□ 1.02
NR1H3-227ENST00000498548 PLEKHF1Q96S99 279 aa21.42■■□□□ 1.02
NR1H3-227ENST00000498548 HEG1Q9ULI3 1381 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms