RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 MAP4K5Q9Y4K4 846 aa9.49□□□□□ -0.89
PMPCB-208ENST00000498530 SLC19A1P41440 591 aa9.48□□□□□ -0.89
PMPCB-208ENST00000498530 ZC3H6P61129 1189 aaKnown RBP9.48□□□□□ -0.89
PMPCB-208ENST00000498530 TAGLNQ01995 201 aaKnown RBP9.48□□□□□ -0.89
PMPCB-208ENST00000498530 MTMR3Q13615 1198 aa9.48□□□□□ -0.89
PMPCB-208ENST00000498530 CAPN12Q6ZSI9 719 aa9.48□□□□□ -0.89
PMPCB-208ENST00000498530 SREK1Q8WXA9 508 aaKnown RBP9.48□□□□□ -0.89
PMPCB-208ENST00000498530 PURBQ96QR8 312 aaKnown RBP9.48□□□□□ -0.89
PMPCB-208ENST00000498530 TMEM229AB2RXF0 380 aa9.47□□□□□ -0.89
PMPCB-208ENST00000498530 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
PMPCB-208ENST00000498530 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
PMPCB-208ENST00000498530 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
PMPCB-208ENST00000498530 LGR5O75473 907 aa9.46□□□□□ -0.9
PMPCB-208ENST00000498530 ERVK-9P63128 1117 aa9.46□□□□□ -0.9
PMPCB-208ENST00000498530 PRR20EP86478 221 aa9.46□□□□□ -0.9
PMPCB-208ENST00000498530 PRR20CP86479 221 aa9.46□□□□□ -0.9
PMPCB-208ENST00000498530 PRR20DP86480 221 aa9.46□□□□□ -0.9
PMPCB-208ENST00000498530 PRR20BP86481 221 aa9.46□□□□□ -0.9
PMPCB-208ENST00000498530 PRR20AP86496 221 aa9.46□□□□□ -0.9
PMPCB-208ENST00000498530 MRPL58Q14197 206 aaKnown RBP9.46□□□□□ -0.9
PMPCB-208ENST00000498530 CITED4Q96RK1 184 aa9.46□□□□□ -0.9
PMPCB-208ENST00000498530 KCTD15Q96SI1 283 aaPredicted RBP9.46□□□□□ -0.9
PMPCB-208ENST00000498530 EPHA4P54764 986 aa9.45□□□□□ -0.9
PMPCB-208ENST00000498530 SH3BP2P78314 561 aa9.45□□□□□ -0.9
PMPCB-208ENST00000498530 FMR1Q06787 632 aaKnown RBP eCLIP9.45□□□□□ -0.9
PMPCB-208ENST00000498530 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
PMPCB-208ENST00000498530 SPRYD7Q5W111 196 aa9.45□□□□□ -0.9
PMPCB-208ENST00000498530 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
PMPCB-208ENST00000498530 FCF1Q9Y324 198 aaKnown RBP9.45□□□□□ -0.9
PMPCB-208ENST00000498530 BACH1O14867 736 aa9.44□□□□□ -0.9
PMPCB-208ENST00000498530 TREHO43280 583 aa9.44□□□□□ -0.9
PMPCB-208ENST00000498530 P4HBP07237 508 aaKnown RBP9.44□□□□□ -0.9
PMPCB-208ENST00000498530 SCNN1DP51172 638 aa9.44□□□□□ -0.9
PMPCB-208ENST00000498530 FGD1P98174 961 aa9.44□□□□□ -0.9
PMPCB-208ENST00000498530 INTS6LQ5JSJ4 861 aaKnown RBP9.44□□□□□ -0.9
PMPCB-208ENST00000498530 TMC7Q7Z402 723 aa9.44□□□□□ -0.9
PMPCB-208ENST00000498530 DRC1Q96MC2 740 aa9.44□□□□□ -0.9
PMPCB-208ENST00000498530 NDUFB5O43674 189 aa9.43□□□□□ -0.9
PMPCB-208ENST00000498530 SCTRP47872 440 aa9.43□□□□□ -0.9
PMPCB-208ENST00000498530 TREML4Q6UXN2 200 aa9.43□□□□□ -0.9
PMPCB-208ENST00000498530 ZNF598Q86UK7 904 aaKnown RBP9.43□□□□□ -0.9
PMPCB-208ENST00000498530 ERVH48-1M5A8F1 160 aa9.42□□□□□ -0.9
PMPCB-208ENST00000498530 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
PMPCB-208ENST00000498530 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
PMPCB-208ENST00000498530 FAM187AA6NFU0 413 aa9.41□□□□□ -0.9
PMPCB-208ENST00000498530 MPSTP25325 297 aa9.41□□□□□ -0.9
PMPCB-208ENST00000498530 GDF10P55107 478 aa9.41□□□□□ -0.9
PMPCB-208ENST00000498530 NAA30Q147X3 362 aaPredicted RBP9.41□□□□□ -0.9
PMPCB-208ENST00000498530 TSNAXIP1Q2TAA8 658 aa9.41□□□□□ -0.9
PMPCB-208ENST00000498530 C16orf46Q6P387 395 aa9.41□□□□□ -0.9
PMPCB-208ENST00000498530 SCG3Q8WXD2 468 aaKnown RBP9.41□□□□□ -0.9
PMPCB-208ENST00000498530 SCAMP3O14828 347 aaKnown RBP9.4□□□□□ -0.9
PMPCB-208ENST00000498530 S1PR4O95977 384 aa9.4□□□□□ -0.9
PMPCB-208ENST00000498530 HMGB1P09429 215 aaKnown RBP9.4□□□□□ -0.9
PMPCB-208ENST00000498530 VARSP26640 1264 aaKnown RBP9.4□□□□□ -0.9
PMPCB-208ENST00000498530 ITGAEP38570 1179 aa9.4□□□□□ -0.9
PMPCB-208ENST00000498530 DMRTB1Q96MA1 342 aa9.4□□□□□ -0.9
PMPCB-208ENST00000498530 SLC4A9Q96Q91 983 aa9.4□□□□□ -0.9
PMPCB-208ENST00000498530 OSBPL3Q9H4L5 887 aa9.4□□□□□ -0.9
PMPCB-208ENST00000498530 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■■■■□ 23.9
PMPCB-208ENST00000498530 ATAD2Q6PL18 1390 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 GDF9O60383 454 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 INHAP05111 366 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 FOXK2Q01167 660 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 DSC3Q14574 896 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 SF3A1Q15459 793 aaKnown RBP9.39□□□□□ -0.91
PMPCB-208ENST00000498530 ZNF697Q5TEC3 545 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 ALKBH2Q6NS38 261 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 LIAT1Q6ZQX7 453 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 ANKLE1Q8NAG6 615 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 PUS7Q96PZ0 661 aaKnown RBP9.39□□□□□ -0.91
PMPCB-208ENST00000498530 BACH2Q9BYV9 841 aa9.39□□□□□ -0.91
PMPCB-208ENST00000498530 IGHA2P01877 340 aa9.38□□□□□ -0.91
PMPCB-208ENST00000498530 WNT7BP56706 349 aa9.38□□□□□ -0.91
PMPCB-208ENST00000498530 NAALADL2Q58DX5 795 aa9.38□□□□□ -0.91
PMPCB-208ENST00000498530 VASH1Q7L8A9 365 aaPredicted RBP9.38□□□□□ -0.91
PMPCB-208ENST00000498530 TNS4Q8IZW8 715 aa9.38□□□□□ -0.91
PMPCB-208ENST00000498530 VTI1AQ96AJ9 217 aa9.38□□□□□ -0.91
PMPCB-208ENST00000498530 ALKBH8Q96BT7 664 aaKnown RBP9.38□□□□□ -0.91
PMPCB-208ENST00000498530 TSPAN10Q9H1Z9 355 aaPredicted RBP9.38□□□□□ -0.91
PMPCB-208ENST00000498530 BRPF3Q9ULD4 1205 aa9.38□□□□□ -0.91
PMPCB-208ENST00000498530 TNFRSF10AO00220 468 aa9.37□□□□□ -0.91
PMPCB-208ENST00000498530 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
PMPCB-208ENST00000498530 ST8SIA5O15466 376 aa9.37□□□□□ -0.91
PMPCB-208ENST00000498530 PRPF40AO75400 957 aaKnown RBP9.37□□□□□ -0.91
PMPCB-208ENST00000498530 LDLRAD1Q5T700 205 aa9.37□□□□□ -0.91
PMPCB-208ENST00000498530 POTEAQ6S8J7 498 aa9.37□□□□□ -0.91
PMPCB-208ENST00000498530 UBXN4Q92575 508 aa9.37□□□□□ -0.91
PMPCB-208ENST00000498530 FAM129BQ96TA1 746 aa9.37□□□□□ -0.91
PMPCB-208ENST00000498530 ESF1Q9H501 851 aaKnown RBP9.37□□□□□ -0.91
PMPCB-208ENST00000498530 TNFRSF10BO14763 440 aa9.36□□□□□ -0.91
PMPCB-208ENST00000498530 FZD6O60353 706 aa9.36□□□□□ -0.91
PMPCB-208ENST00000498530 HSP90B1P14625 803 aaKnown RBP9.36□□□□□ -0.91
PMPCB-208ENST00000498530 RAB15P59190 212 aa9.36□□□□□ -0.91
PMPCB-208ENST00000498530 DHX9Q08211 1270 aaKnown RBP9.36□□□□□ -0.91
PMPCB-208ENST00000498530 MTFR1Q15390 333 aa9.36□□□□□ -0.91
PMPCB-208ENST00000498530 CDK15Q96Q40 435 aa9.36□□□□□ -0.91
PMPCB-208ENST00000498530 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
PMPCB-208ENST00000498530 AAASQ9NRG9 546 aa9.36□□□□□ -0.91
PMPCB-208ENST00000498530 ERCC5P28715 1186 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms