RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 UNC5CLQ8IV45 518 aa11.48□□□□□ -0.57
PUDP-205ENST00000498474 GJD4Q96KN9 370 aaPredicted RBP11.48□□□□□ -0.57
PUDP-205ENST00000498474 SLIT2O94813 1529 aa11.48□□□□□ -0.57
PUDP-205ENST00000498474 GLI3P10071 1580 aa11.48□□□□□ -0.57
PUDP-205ENST00000498474 PLCH1Q4KWH8 1693 aa11.48□□□□□ -0.57
PUDP-205ENST00000498474 ALS2Q96Q42 1657 aa11.48□□□□□ -0.57
PUDP-205ENST00000498474 KIAA1210Q9ULL0 1709 aa11.48□□□□□ -0.57
PUDP-205ENST00000498474 BRWD3Q6RI45 1802 aa11.48□□□□□ -0.57
PUDP-205ENST00000498474 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.47□□□□□ -0.57
PUDP-205ENST00000498474 ATP7BP35670 1465 aa11.47□□□□□ -0.57
PUDP-205ENST00000498474 FAM83GA6ND36 823 aa11.47□□□□□ -0.57
PUDP-205ENST00000498474 NBPF26B4DH59 902 aa11.47□□□□□ -0.57
PUDP-205ENST00000498474 NUTM2GQ5VZR2 741 aa11.47□□□□□ -0.57
PUDP-205ENST00000498474 PADI6Q6TGC4 694 aa11.47□□□□□ -0.57
PUDP-205ENST00000498474 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
PUDP-205ENST00000498474 RALGAPBQ86X10 1494 aa11.46□□□□□ -0.57
PUDP-205ENST00000498474 KCNC4Q03721 635 aa11.46□□□□□ -0.57
PUDP-205ENST00000498474 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
PUDP-205ENST00000498474 ITSN1Q15811 1721 aa11.46□□□□□ -0.58
PUDP-205ENST00000498474 ARHGEF10O15013 1369 aa11.45□□□□□ -0.58
PUDP-205ENST00000498474 GPRASP1Q5JY77 1395 aa11.45□□□□□ -0.58
PUDP-205ENST00000498474 RGS20O76081 388 aa11.45□□□□□ -0.58
PUDP-205ENST00000498474 TTC13Q8NBP0 860 aa11.45□□□□□ -0.58
PUDP-205ENST00000498474 CRYBG1Q9Y4K1 1723 aa11.44□□□□□ -0.58
PUDP-205ENST00000498474 ACEP12821 1306 aa11.44□□□□□ -0.58
PUDP-205ENST00000498474 RBM27Q9P2N5 1060 aaKnown RBP11.44□□□□□ -0.58
PUDP-205ENST00000498474 NWD2Q9ULI1 1742 aa11.43□□□□□ -0.58
PUDP-205ENST00000498474 EIF3AQ14152 1382 aaKnown RBP11.43□□□□□ -0.58
PUDP-205ENST00000498474 ATAD2Q6PL18 1390 aa11.43□□□□□ -0.58
PUDP-205ENST00000498474 TOPAZ1Q8N9V7 1692 aa11.43□□□□□ -0.58
PUDP-205ENST00000498474 QRICH2Q9H0J4 1663 aa11.43□□□□□ -0.58
PUDP-205ENST00000498474 BTG4Q9NY30 223 aa11.43□□□□□ -0.58
PUDP-205ENST00000498474 NRAPQ86VF7 1730 aa11.43□□□□□ -0.58
PUDP-205ENST00000498474 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
PUDP-205ENST00000498474 RNF40O75150 1001 aa11.42□□□□□ -0.58
PUDP-205ENST00000498474 SRPK2P78362 688 aaKnown RBP11.42□□□□□ -0.58
PUDP-205ENST00000498474 CHRNA2Q15822 529 aa11.42□□□□□ -0.58
PUDP-205ENST00000498474 VPS72Q15906 364 aa11.42□□□□□ -0.58
PUDP-205ENST00000498474 NBPF8Q3BBV2 869 aa11.42□□□□□ -0.58
PUDP-205ENST00000498474 SEPT12Q8IYM1 358 aa11.42□□□□□ -0.58
PUDP-205ENST00000498474 TRPM1Q7Z4N2 1603 aa11.42□□□□□ -0.58
PUDP-205ENST00000498474 ZC3H6P61129 1189 aaKnown RBP11.41□□□□□ -0.58
PUDP-205ENST00000498474 PHRF1Q9P1Y6 1649 aaKnown RBP11.4□□□□□ -0.58
PUDP-205ENST00000498474 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
PUDP-205ENST00000498474 COL14A1Q05707 1796 aaKnown RBP11.4□□□□□ -0.58
PUDP-205ENST00000498474 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
PUDP-205ENST00000498474 MYT1Q01538 1121 aa11.39□□□□□ -0.59
PUDP-205ENST00000498474 FAM182BQ5T319 152 aa11.39□□□□□ -0.59
PUDP-205ENST00000498474 PPIP5K1Q6PFW1 1433 aa11.39□□□□□ -0.59
PUDP-205ENST00000498474 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
PUDP-205ENST00000498474 POLR3AO14802 1390 aaPredicted RBP11.39□□□□□ -0.59
PUDP-205ENST00000498474 KIAA0232Q92628 1395 aa11.39□□□□□ -0.59
PUDP-205ENST00000498474 SWT1Q5T5J6 900 aaKnown RBP11.38□□□□□ -0.59
PUDP-205ENST00000498474 ABTB2Q8N961 1025 aa11.38□□□□□ -0.59
PUDP-205ENST00000498474 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
PUDP-205ENST00000498474 CABP1Q9NZU7 370 aa11.38□□□□□ -0.59
PUDP-205ENST00000498474 ROCK2O75116 1388 aaKnown RBP11.38□□□□□ -0.59
PUDP-205ENST00000498474 APLP1P51693 650 aa11.37□□□□□ -0.59
PUDP-205ENST00000498474 DEFB132Q7Z7B7 95 aa11.37□□□□□ -0.59
PUDP-205ENST00000498474 EYA1Q99502 592 aa11.37□□□□□ -0.59
PUDP-205ENST00000498474 MTRQ99707 1265 aa11.37□□□□□ -0.59
PUDP-205ENST00000498474 STRN4Q9NRL3 753 aa11.37□□□□□ -0.59
PUDP-205ENST00000498474 ZBTB7CA1YPR0 619 aa11.36□□□□□ -0.59
PUDP-205ENST00000498474 PTGDRQ13258 359 aa11.35□□□□□ -0.59
PUDP-205ENST00000498474 KRT27Q7Z3Y8 459 aa11.35□□□□□ -0.59
PUDP-205ENST00000498474 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
PUDP-205ENST00000498474 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
PUDP-205ENST00000498474 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
PUDP-205ENST00000498474 NRKQ7Z2Y5 1582 aa11.34□□□□□ -0.59
PUDP-205ENST00000498474 SEMA3EO15041 775 aa11.34□□□□□ -0.59
PUDP-205ENST00000498474 ZNF516Q92618 1163 aa11.34□□□□□ -0.59
PUDP-205ENST00000498474 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
PUDP-205ENST00000498474 EVC2Q86UK5 1308 aa11.33□□□□□ -0.6
PUDP-205ENST00000498474 GCP02774 474 aa11.32□□□□□ -0.6
PUDP-205ENST00000498474 EVA1CP58658 441 aa11.32□□□□□ -0.6
PUDP-205ENST00000498474 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
PUDP-205ENST00000498474 LARP1Q6PKG0 1096 aaKnown RBP11.32□□□□□ -0.6
PUDP-205ENST00000498474 USP6P35125 1406 aa11.32□□□□□ -0.6
PUDP-205ENST00000498474 BLMP54132 1417 aaPredicted RBP11.32□□□□□ -0.6
PUDP-205ENST00000498474 USP19O94966 1318 aa11.32□□□□□ -0.6
PUDP-205ENST00000498474 SPATA31A1Q5TZJ5 1347 aa11.32□□□□□ -0.6
PUDP-205ENST00000498474 AKAP12Q02952 1782 aa11.31□□□□□ -0.6
PUDP-205ENST00000498474 PIK3C2AO00443 1686 aa11.31□□□□□ -0.6
PUDP-205ENST00000498474 TRIM26Q12899 539 aaPredicted RBP11.31□□□□□ -0.6
PUDP-205ENST00000498474 NLRP13Q86W25 1043 aa11.31□□□□□ -0.6
PUDP-205ENST00000498474 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
PUDP-205ENST00000498474 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
PUDP-205ENST00000498474 LMO7Q8WWI1 1683 aa11.3□□□□□ -0.6
PUDP-205ENST00000498474 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
PUDP-205ENST00000498474 TONSLQ96HA7 1378 aa11.3□□□□□ -0.6
PUDP-205ENST00000498474 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
PUDP-205ENST00000498474 IL21Q9HBE4 155 aa11.3□□□□□ -0.6
PUDP-205ENST00000498474 SSH2Q76I76 1423 aa11.29□□□□□ -0.6
PUDP-205ENST00000498474 SF3B2Q13435 895 aaKnown RBP11.29□□□□□ -0.6
PUDP-205ENST00000498474 NKX2-3Q8TAU0 364 aa11.29□□□□□ -0.6
PUDP-205ENST00000498474 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
PUDP-205ENST00000498474 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
PUDP-205ENST00000498474 SLF2Q8IX21 1173 aa11.28□□□□□ -0.6
PUDP-205ENST00000498474 COPS2P61201 443 aa11.27□□□□□ -0.61
PUDP-205ENST00000498474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms