RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
RNF8-208ENST00000498460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
RNF8-208ENST00000498460 C1orf141Q5JVX7 400 aa13.47□□□□□ -0.25
RNF8-208ENST00000498460 LINC00116Q8NCU8 138 aa13.47□□□□□ -0.25
RNF8-208ENST00000498460 ATG3Q9NT62 314 aa13.47□□□□□ -0.25
RNF8-208ENST00000498460 MYH14Q7Z406 1995 aaKnown RBP13.46□□□□□ -0.25
RNF8-208ENST00000498460 GNPATO15228 680 aa13.46□□□□□ -0.25
RNF8-208ENST00000498460 SSFA2P28290 1259 aa13.46□□□□□ -0.25
RNF8-208ENST00000498460 CABP4P57796 275 aa13.46□□□□□ -0.25
RNF8-208ENST00000498460 ITPK1Q13572 414 aa13.46□□□□□ -0.25
RNF8-208ENST00000498460 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
RNF8-208ENST00000498460 SMIM5Q71RC9 77 aa13.46□□□□□ -0.25
RNF8-208ENST00000498460 AEBP1Q8IUX7 1158 aa13.46□□□□□ -0.25
RNF8-208ENST00000498460 ZNF784Q8NCA9 323 aaPredicted RBP13.46□□□□□ -0.25
RNF8-208ENST00000498460 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
RNF8-208ENST00000498460 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.25
RNF8-208ENST00000498460 ZNF831Q5JPB2 1677 aa13.46□□□□□ -0.26
RNF8-208ENST00000498460 MTHFSP49914 203 aa13.45□□□□□ -0.26
RNF8-208ENST00000498460 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
RNF8-208ENST00000498460 AMIGO3Q86WK7 504 aa13.45□□□□□ -0.26
RNF8-208ENST00000498460 CD2APQ9Y5K6 639 aa13.44□□□□□ -0.26
RNF8-208ENST00000498460 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
RNF8-208ENST00000498460 IL13P35225 146 aa13.43□□□□□ -0.26
RNF8-208ENST00000498460 CC2D1BQ5T0F9 858 aaKnown RBP13.43□□□□□ -0.26
RNF8-208ENST00000498460 KDM6AO15550 1401 aaPredicted RBP13.42□□□□□ -0.26
RNF8-208ENST00000498460 YBX3P16989 372 aaKnown RBP eCLIP13.42□□□□□ -0.26
RNF8-208ENST00000498460 NFATC2IPQ8NCF5 419 aa13.42□□□□□ -0.26
RNF8-208ENST00000498460 RTCBQ9Y3I0 505 aaKnown RBP13.42□□□□□ -0.26
RNF8-208ENST00000498460 KDRP35968 1356 aa13.42□□□□□ -0.26
RNF8-208ENST00000498460 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
RNF8-208ENST00000498460 CNGB1Q14028 1251 aaPredicted RBP13.41□□□□□ -0.26
RNF8-208ENST00000498460 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
RNF8-208ENST00000498460 C4AP0C0L4 1744 aa13.4□□□□□ -0.26
RNF8-208ENST00000498460 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
RNF8-208ENST00000498460 HMOX1P09601 288 aa13.4□□□□□ -0.26
RNF8-208ENST00000498460 SLC4A9Q96Q91 983 aa13.4□□□□□ -0.26
RNF8-208ENST00000498460 N4BP2Q86UW6 1770 aaPredicted RBP13.4□□□□□ -0.26
RNF8-208ENST00000498460 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
RNF8-208ENST00000498460 AKAP4Q5JQC9 854 aa13.39□□□□□ -0.27
RNF8-208ENST00000498460 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
RNF8-208ENST00000498460 DIAPH1O60610 1272 aaKnown RBP13.38□□□□□ -0.27
RNF8-208ENST00000498460 RFC4P35249 363 aa13.38□□□□□ -0.27
RNF8-208ENST00000498460 TJP1Q07157 1748 aa13.38□□□□□ -0.27
RNF8-208ENST00000498460 CNTNAP4Q9C0A0 1308 aa13.38□□□□□ -0.27
RNF8-208ENST00000498460 RPS6KA4O75676 772 aa13.37□□□□□ -0.27
RNF8-208ENST00000498460 MMP10P09238 476 aa13.37□□□□□ -0.27
RNF8-208ENST00000498460 NLGN1Q8N2Q7 840 aa13.37□□□□□ -0.27
RNF8-208ENST00000498460 ARHGEF1Q92888 912 aaKnown RBP13.37□□□□□ -0.27
RNF8-208ENST00000498460 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
RNF8-208ENST00000498460 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
RNF8-208ENST00000498460 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
RNF8-208ENST00000498460 CRKLP46109 303 aaKnown RBP13.35□□□□□ -0.27
RNF8-208ENST00000498460 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
RNF8-208ENST00000498460 U2SURPO15042 1029 aaKnown RBP13.34□□□□□ -0.27
RNF8-208ENST00000498460 RNMTO43148 476 aaKnown RBP13.34□□□□□ -0.27
RNF8-208ENST00000498460 NPC1L1Q9UHC9 1359 aa13.33□□□□□ -0.27
RNF8-208ENST00000498460 GIGYF1O75420 1035 aaPredicted RBP13.33□□□□□ -0.28
RNF8-208ENST00000498460 GYS1P13807 737 aa13.33□□□□□ -0.28
RNF8-208ENST00000498460 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
RNF8-208ENST00000498460 PARP3Q9Y6F1 533 aa13.33□□□□□ -0.28
RNF8-208ENST00000498460 BRCA1P38398 1863 aaKnown RBP13.33□□□□□ -0.28
RNF8-208ENST00000498460 KIAA1551Q9HCM1 1747 aa13.33□□□□□ -0.28
RNF8-208ENST00000498460 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
RNF8-208ENST00000498460 ADAMTS7Q9UKP4 1686 aa13.32□□□□□ -0.28
RNF8-208ENST00000498460 C1QTNF8P60827 252 aa13.32□□□□□ -0.28
RNF8-208ENST00000498460 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
RNF8-208ENST00000498460 CCDC87Q9NVE4 849 aa13.32□□□□□ -0.28
RNF8-208ENST00000498460 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
RNF8-208ENST00000498460 MRC1P22897 1456 aa13.31□□□□□ -0.28
RNF8-208ENST00000498460 TGFB2P61812 414 aa13.31□□□□□ -0.28
RNF8-208ENST00000498460 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
RNF8-208ENST00000498460 COL3A1P02461 1466 aaPredicted RBP13.3□□□□□ -0.28
RNF8-208ENST00000498460 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
RNF8-208ENST00000498460 AFDNP55196 1824 aaKnown RBP13.3□□□□□ -0.28
RNF8-208ENST00000498460 ARFGEF1Q9Y6D6 1849 aa13.3□□□□□ -0.28
RNF8-208ENST00000498460 A0A0G2JLW4 131 aa13.3□□□□□ -0.28
RNF8-208ENST00000498460 ZPR1O75312 459 aa13.3□□□□□ -0.28
RNF8-208ENST00000498460 INTS5Q6P9B9 1019 aaKnown RBP13.3□□□□□ -0.28
RNF8-208ENST00000498460 CFAP53Q96M91 514 aa13.3□□□□□ -0.28
RNF8-208ENST00000498460 SRP68Q9UHB9 627 aaKnown RBP13.3□□□□□ -0.28
RNF8-208ENST00000498460 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
RNF8-208ENST00000498460 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
RNF8-208ENST00000498460 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
RNF8-208ENST00000498460 BCS1LQ9Y276 419 aa13.29□□□□□ -0.28
RNF8-208ENST00000498460 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
RNF8-208ENST00000498460 C10orf71Q711Q0 1435 aa13.29□□□□□ -0.28
RNF8-208ENST00000498460 KCPQ6ZWJ8 1503 aa13.29□□□□□ -0.28
RNF8-208ENST00000498460 GNAT3A8MTJ3 354 aa13.28□□□□□ -0.28
RNF8-208ENST00000498460 CYP19A1P11511 503 aaPredicted RBP13.28□□□□□ -0.28
RNF8-208ENST00000498460 TEFQ10587 303 aa13.28□□□□□ -0.28
RNF8-208ENST00000498460 FKBP8Q14318 412 aa13.28□□□□□ -0.28
RNF8-208ENST00000498460 TTC5Q8N0Z6 440 aa13.28□□□□□ -0.28
RNF8-208ENST00000498460 GAS2L2Q8NHY3 880 aa13.28□□□□□ -0.28
RNF8-208ENST00000498460 GPBP1L1Q9HC44 474 aaPredicted RBP13.28□□□□□ -0.28
RNF8-208ENST00000498460 DPEP1P16444 411 aa13.27□□□□□ -0.29
RNF8-208ENST00000498460 ZNF526Q8TF50 670 aaPredicted RBP13.27□□□□□ -0.29
RNF8-208ENST00000498460 NUDCQ9Y266 331 aa13.27□□□□□ -0.29
RNF8-208ENST00000498460 FCHSD2O94868 740 aa13.26□□□□□ -0.29
RNF8-208ENST00000498460 SOS1Q07889 1333 aaPredicted RBP13.26□□□□□ -0.29
RNF8-208ENST00000498460 USPL1Q5W0Q7 1092 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms