RNA–Protein interactions for RNA: ENST00000498035.5

HM13-224, Transcript of histocompatibility minor 13, human

TSL 2 BASIC

Gene HM13, Length 3,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-224	ENST00000498035	ATAD2	Q6PL18	1390 aa		10.62	□□□□□ -0.71
HM13-224	ENST00000498035	PRR12	Q9ULL5	1215 aa		10.62	□□□□□ -0.71
HM13-224	ENST00000498035	ZMYND10	O75800	440 aa		10.62	□□□□□ -0.71
HM13-224	ENST00000498035	SPOCK2	Q92563	424 aa		10.62	□□□□□ -0.71
HM13-224	ENST00000498035	RBM28	Q9NW13	759 aa	Known RBP	10.62	□□□□□ -0.71
HM13-224	ENST00000498035	TTC37	Q6PGP7	1564 aa		10.62	□□□□□ -0.71
HM13-224	ENST00000498035	USP5	P45974	858 aa		10.62	□□□□□ -0.71
HM13-224	ENST00000498035	PANK1	Q8TE04	598 aa		10.62	□□□□□ -0.71
HM13-224	ENST00000498035	IPO9	Q96P70	1041 aa	Known RBP	10.62	□□□□□ -0.71
HM13-224	ENST00000498035	ATP7A	Q04656	1500 aa		10.61	□□□□□ -0.71
HM13-224	ENST00000498035	NAALADL2	Q58DX5	795 aa		10.61	□□□□□ -0.71
HM13-224	ENST00000498035	BCAR3	O75815	825 aa		10.61	□□□□□ -0.71
HM13-224	ENST00000498035	UHRF1BP1L	A0JNW5	1464 aa		10.61	□□□□□ -0.71
HM13-224	ENST00000498035		A0A0G2JS52	829 aa		10.61	□□□□□ -0.71
HM13-224	ENST00000498035	COPB2	P35606	906 aa		10.61	□□□□□ -0.71
HM13-224	ENST00000498035	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.61	□□□□□ -0.71	8e-8	■■□□□ 13
HM13-224	ENST00000498035	PARD3	Q8TEW0	1356 aa		10.61	□□□□□ -0.71
HM13-224	ENST00000498035	NEUROD6	Q96NK8	337 aa		10.6	□□□□□ -0.71
HM13-224	ENST00000498035	SUDS3	Q9H7L9	328 aa	Predicted RBP	10.6	□□□□□ -0.71
HM13-224	ENST00000498035	MYO5C	Q9NQX4	1742 aa		10.6	□□□□□ -0.71
HM13-224	ENST00000498035	RFX1	P22670	979 aa		10.6	□□□□□ -0.71
HM13-224	ENST00000498035	PRKAR2B	P31323	418 aa		10.6	□□□□□ -0.71
HM13-224	ENST00000498035	SPDYE4	A6NLX3	237 aa		10.6	□□□□□ -0.71
HM13-224	ENST00000498035	ONECUT3	O60422	494 aa	Predicted RBP	10.6	□□□□□ -0.71
HM13-224	ENST00000498035	YY1AP1	Q9H869	796 aa		10.6	□□□□□ -0.71
HM13-224	ENST00000498035	L1TD1	Q5T7N2	865 aa	Known RBP	10.59	□□□□□ -0.71
HM13-224	ENST00000498035	DZIP1L	Q8IYY4	767 aa	Known RBP	10.59	□□□□□ -0.71
HM13-224	ENST00000498035	MAST1	Q9Y2H9	1570 aa		10.59	□□□□□ -0.71
HM13-224	ENST00000498035	ICE2	Q659A1	982 aa		10.59	□□□□□ -0.71
HM13-224	ENST00000498035	TTC30A	Q86WT1	665 aa		10.59	□□□□□ -0.71
HM13-224	ENST00000498035	RPS6KC1	Q96S38	1066 aa		10.59	□□□□□ -0.71
HM13-224	ENST00000498035	CDC42BPA	Q5VT25	1732 aa		10.59	□□□□□ -0.71
HM13-224	ENST00000498035	SLFN5	Q08AF3	891 aa		10.59	□□□□□ -0.71
HM13-224	ENST00000498035	HOXA2	O43364	376 aa		10.58	□□□□□ -0.72
HM13-224	ENST00000498035	CACTIN-AS1	Q8N1I8	211 aa		10.58	□□□□□ -0.72
HM13-224	ENST00000498035	STK31	Q9BXU1	1019 aa		10.58	□□□□□ -0.72
HM13-224	ENST00000498035	ANAPC4	Q9UJX5	808 aa		10.58	□□□□□ -0.72
HM13-224	ENST00000498035	CCDC61	Q9Y6R9	512 aa		10.58	□□□□□ -0.72
HM13-224	ENST00000498035	PREX2	Q70Z35	1606 aa		10.58	□□□□□ -0.72
HM13-224	ENST00000498035	NAT1	P18440	290 aa		10.58	□□□□□ -0.72
HM13-224	ENST00000498035	HSP90AB2P	Q58FF8	381 aa		10.58	□□□□□ -0.72
HM13-224	ENST00000498035	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.58	□□□□□ -0.72
HM13-224	ENST00000498035	TSR2	Q969E8	191 aa	Known RBP	10.58	□□□□□ -0.72
HM13-224	ENST00000498035	CCDC94	Q9BW85	323 aa	Predicted RBP	10.58	□□□□□ -0.72
HM13-224	ENST00000498035	CXorf56	Q9H5V9	222 aa		10.58	□□□□□ -0.72
HM13-224	ENST00000498035	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.57	□□□□□ -0.72
HM13-224	ENST00000498035	E2F5	Q15329	346 aa		10.57	□□□□□ -0.72
HM13-224	ENST00000498035	ENOX2	Q16206	610 aa	Known RBP	10.57	□□□□□ -0.72
HM13-224	ENST00000498035	SLC4A10	Q6U841	1118 aa		10.57	□□□□□ -0.72
HM13-224	ENST00000498035	SMC3	Q9UQE7	1217 aa		10.57	□□□□□ -0.72
HM13-224	ENST00000498035	GPRASP1	Q5JY77	1395 aa		10.57	□□□□□ -0.72
HM13-224	ENST00000498035	FAM161A	Q3B820	660 aa		10.57	□□□□□ -0.72
HM13-224	ENST00000498035	BSDC1	Q9NW68	430 aa	Predicted RBP	10.57	□□□□□ -0.72
HM13-224	ENST00000498035	MKRN1	Q9UHC7	482 aa	Known RBP	10.57	□□□□□ -0.72
HM13-224	ENST00000498035	CEBPA	P49715	358 aa	Predicted RBP	10.57	□□□□□ -0.72
HM13-224	ENST00000498035	EXOSC9	Q06265	439 aa	Known RBP	10.57	□□□□□ -0.72
HM13-224	ENST00000498035	IRF2BPL	Q9H1B7	796 aa		10.57	□□□□□ -0.72
HM13-224	ENST00000498035	FAM13B	Q9NYF5	915 aa		10.57	□□□□□ -0.72
HM13-224	ENST00000498035	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.57	□□□□□ -0.72
HM13-224	ENST00000498035	NLRP6	P59044	892 aa		10.56	□□□□□ -0.72
HM13-224	ENST00000498035	CFAP69	A5D8W1	941 aa		10.56	□□□□□ -0.72
HM13-224	ENST00000498035	NAT2	P11245	290 aa		10.56	□□□□□ -0.72
HM13-224	ENST00000498035	NUDT16	Q96DE0	195 aa	Known RBP	10.56	□□□□□ -0.72
HM13-224	ENST00000498035	PAGR1	Q9BTK6	254 aa		10.56	□□□□□ -0.72
HM13-224	ENST00000498035	DDX19B	Q9UMR2	479 aa		10.56	□□□□□ -0.72
HM13-224	ENST00000498035	CCT2	P78371	535 aa	Known RBP	10.56	□□□□□ -0.72
HM13-224	ENST00000498035	WDR63	Q8IWG1	891 aa		10.56	□□□□□ -0.72
HM13-224	ENST00000498035	MPHOSPH6	Q99547	160 aa	Known RBP	10.56	□□□□□ -0.72
HM13-224	ENST00000498035	ADCY10	Q96PN6	1610 aa		10.56	□□□□□ -0.72
HM13-224	ENST00000498035	CROCC2	H7BZ55	1655 aa		10.56	□□□□□ -0.72
HM13-224	ENST00000498035	GNAI1	P63096	354 aa		10.55	□□□□□ -0.72
HM13-224	ENST00000498035	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.55	□□□□□ -0.72
HM13-224	ENST00000498035	POLR1A	O95602	1720 aa	Predicted RBP	10.55	□□□□□ -0.72
HM13-224	ENST00000498035	CFAP65	Q6ZU64	1925 aa	Known RBP	10.55	□□□□□ -0.72
HM13-224	ENST00000498035	RSPH1	Q8WYR4	309 aa		10.55	□□□□□ -0.72
HM13-224	ENST00000498035	CARD14	Q9BXL6	1004 aa		10.55	□□□□□ -0.72
HM13-224	ENST00000498035	CEP83	Q9Y592	693 aa		10.55	□□□□□ -0.72
HM13-224	ENST00000498035	PSME1	Q06323	249 aa		10.55	□□□□□ -0.72
HM13-224	ENST00000498035	PDE3A	Q14432	1141 aa		10.55	□□□□□ -0.72
HM13-224	ENST00000498035	PTPRO	Q16827	1216 aa		10.55	□□□□□ -0.72
HM13-224	ENST00000498035	UTP14C	Q5TAP6	766 aa	Known RBP	10.55	□□□□□ -0.72
HM13-224	ENST00000498035	EVA1C	P58658	441 aa		10.54	□□□□□ -0.72
HM13-224	ENST00000498035	C20orf194	Q5TEA3	1177 aa		10.54	□□□□□ -0.72
HM13-224	ENST00000498035	DUSP27	Q5VZP5	1158 aa		10.54	□□□□□ -0.72
HM13-224	ENST00000498035	CCDC70	Q6NSX1	233 aa		10.54	□□□□□ -0.72
HM13-224	ENST00000498035	CEP126	Q9P2H0	1117 aa		10.54	□□□□□ -0.72
HM13-224	ENST00000498035	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.54	□□□□□ -0.72
HM13-224	ENST00000498035	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.54	□□□□□ -0.72
HM13-224	ENST00000498035	KIF16B	Q96L93	1317 aa		10.54	□□□□□ -0.72
HM13-224	ENST00000498035	ABCC1	P33527	1531 aa		10.54	□□□□□ -0.72
HM13-224	ENST00000498035	RRS1	Q15050	365 aa	Known RBP	10.54	□□□□□ -0.72
HM13-224	ENST00000498035	C4orf46	Q504U0	113 aa		10.54	□□□□□ -0.72
HM13-224	ENST00000498035	ENOX1	Q8TC92	643 aa	Known RBP	10.54	□□□□□ -0.72
HM13-224	ENST00000498035	ASXL1	Q8IXJ9	1541 aa		10.53	□□□□□ -0.72
HM13-224	ENST00000498035	BORCS6	Q96GS4	357 aa		10.53	□□□□□ -0.72
HM13-224	ENST00000498035	PLA2R1	Q13018	1463 aa		10.53	□□□□□ -0.72
HM13-224	ENST00000498035	ATXN8OS	P0DMR3	200 aa		10.53	□□□□□ -0.72
HM13-224	ENST00000498035	TMPO	P42166	694 aa	Known RBP	10.53	□□□□□ -0.72
HM13-224	ENST00000498035	GIPC2	Q8TF65	315 aa		10.53	□□□□□ -0.72
HM13-224	ENST00000498035	POGZ	Q7Z3K3	1410 aa		10.53	□□□□□ -0.72

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