RNA–Protein interactions for RNA: ENST00000497947.6

LMO7-213, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-213ENST00000497947 SLC12A5Q9H2X9 1139 aa11.23□□□□□ -0.61
LMO7-213ENST00000497947 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
LMO7-213ENST00000497947 KCNQ2O43526 872 aa11.22□□□□□ -0.61
LMO7-213ENST00000497947 NEUROD2Q15784 382 aa11.22□□□□□ -0.61
LMO7-213ENST00000497947 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
LMO7-213ENST00000497947 TRAK1Q9UPV9 953 aa11.22□□□□□ -0.61
LMO7-213ENST00000497947 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.61
LMO7-213ENST00000497947 SPATA31A1Q5TZJ5 1347 aa11.21□□□□□ -0.61
LMO7-213ENST00000497947 TRAK2O60296 914 aa11.21□□□□□ -0.61
LMO7-213ENST00000497947 UBE2Q2Q8WVN8 375 aa11.21□□□□□ -0.61
LMO7-213ENST00000497947 GCC1Q96CN9 775 aa11.21□□□□□ -0.61
LMO7-213ENST00000497947 PRDM11Q9NQV5 511 aa11.21□□□□□ -0.61
LMO7-213ENST00000497947 TERF2IPQ9NYB0 399 aa11.21□□□□□ -0.61
LMO7-213ENST00000497947 RRP7AQ9Y3A4 280 aaKnown RBP11.21□□□□□ -0.61
LMO7-213ENST00000497947 TULP4Q9NRJ4 1543 aa11.2□□□□□ -0.62
LMO7-213ENST00000497947 PPIP5K1Q6PFW1 1433 aa11.2□□□□□ -0.62
LMO7-213ENST00000497947 ANKARQ7Z5J8 1434 aa11.2□□□□□ -0.62
LMO7-213ENST00000497947 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
LMO7-213ENST00000497947 CLCN1P35523 988 aa11.2□□□□□ -0.62
LMO7-213ENST00000497947 TMPOP42166 694 aaKnown RBP11.2□□□□□ -0.62
LMO7-213ENST00000497947 ARHGAP45Q92619 1136 aa11.2□□□□□ -0.62
LMO7-213ENST00000497947 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
LMO7-213ENST00000497947 NRAPQ86VF7 1730 aa11.19□□□□□ -0.62
LMO7-213ENST00000497947 ARHGEF28Q8N1W1 1705 aaKnown RBP11.19□□□□□ -0.62
LMO7-213ENST00000497947 NUCB1Q02818 461 aa11.19□□□□□ -0.62
LMO7-213ENST00000497947 BMP2KLQ5H9B9 411 aa11.19□□□□□ -0.62
LMO7-213ENST00000497947 ITPRIPQ8IWB1 547 aa11.19□□□□□ -0.62
LMO7-213ENST00000497947 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
LMO7-213ENST00000497947 PRAM1Q96QH2 718 aa11.19□□□□□ -0.62
LMO7-213ENST00000497947 PLEKHF1Q96S99 279 aa11.19□□□□□ -0.62
LMO7-213ENST00000497947 COL14A1Q05707 1796 aaKnown RBP11.18□□□□□ -0.62
LMO7-213ENST00000497947 ANKRD26Q9UPS8 1709 aa11.18□□□□□ -0.62
LMO7-213ENST00000497947 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
LMO7-213ENST00000497947 THSD7AQ9UPZ6 1657 aa11.18□□□□□ -0.62
LMO7-213ENST00000497947 TRIM27P14373 513 aa11.18□□□□□ -0.62
LMO7-213ENST00000497947 MFAP1P55081 439 aaKnown RBP11.18□□□□□ -0.62
LMO7-213ENST00000497947 EXOSC9Q06265 439 aaKnown RBP11.18□□□□□ -0.62
LMO7-213ENST00000497947 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
LMO7-213ENST00000497947 ZBTB40Q9NUA8 1239 aa11.18□□□□□ -0.62
LMO7-213ENST00000497947 ABCA3Q99758 1704 aa11.18□□□□□ -0.62
LMO7-213ENST00000497947 GOLGA6L22H0YM25 854 aa11.17□□□□□ -0.62
LMO7-213ENST00000497947 PYGBP11216 843 aa11.17□□□□□ -0.62
LMO7-213ENST00000497947 XRCC6P12956 609 aaKnown RBP eCLIP11.17□□□□□ -0.62
LMO7-213ENST00000497947 TNNT2P45379 298 aaPredicted RBP11.17□□□□□ -0.62
LMO7-213ENST00000497947 SAFB2Q14151 953 aaKnown RBP eCLIP11.17□□□□□ -0.62
LMO7-213ENST00000497947 GLIPR1L2Q4G1C9 344 aa11.17□□□□□ -0.62
LMO7-213ENST00000497947 SSH1Q8WYL5 1049 aa11.17□□□□□ -0.62
LMO7-213ENST00000497947 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
LMO7-213ENST00000497947 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
LMO7-213ENST00000497947 TNS1Q9HBL0 1735 aaKnown RBP11.17□□□□□ -0.62
LMO7-213ENST00000497947 DIAPH1O60610 1272 aaKnown RBP11.16□□□□□ -0.62
LMO7-213ENST00000497947 FCHSD2O94868 740 aa11.16□□□□□ -0.62
LMO7-213ENST00000497947 HSP90AB1P08238 724 aaKnown RBP11.16□□□□□ -0.62
LMO7-213ENST00000497947 DDIT3P35638 169 aa11.16□□□□□ -0.62
LMO7-213ENST00000497947 HDGFL2Q7Z4V5 671 aaPredicted RBP11.16□□□□□ -0.62
LMO7-213ENST00000497947 CHD1LQ86WJ1 897 aa11.16□□□□□ -0.62
LMO7-213ENST00000497947 ZNF784Q8NCA9 323 aaPredicted RBP11.16□□□□□ -0.62
LMO7-213ENST00000497947 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
LMO7-213ENST00000497947 STRN4Q9NRL3 753 aa11.16□□□□□ -0.62
LMO7-213ENST00000497947 NOB1Q9ULX3 412 aaKnown RBP11.16□□□□□ -0.62
LMO7-213ENST00000497947 EVA1CP58658 441 aa11.15□□□□□ -0.62
LMO7-213ENST00000497947 NGDNQ8NEJ9 315 aaKnown RBP11.15□□□□□ -0.62
LMO7-213ENST00000497947 GRPEL1Q9HAV7 217 aa11.15□□□□□ -0.62
LMO7-213ENST00000497947 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
LMO7-213ENST00000497947 RGPD8O14715 1765 aaPredicted RBP11.15□□□□□ -0.62
LMO7-213ENST00000497947 A0A1W2PP64 1363 aa11.15□□□□□ -0.63
LMO7-213ENST00000497947 KIAA0232Q92628 1395 aa11.15□□□□□ -0.63
LMO7-213ENST00000497947 IBTKQ9P2D0 1353 aaPredicted RBP11.15□□□□□ -0.63
LMO7-213ENST00000497947 U2SURPO15042 1029 aaKnown RBP11.14□□□□□ -0.63
LMO7-213ENST00000497947 LMOD3Q0VAK6 560 aa11.14□□□□□ -0.63
LMO7-213ENST00000497947 RAB3GAP1Q15042 981 aa11.14□□□□□ -0.63
LMO7-213ENST00000497947 CHRNA2Q15822 529 aa11.14□□□□□ -0.63
LMO7-213ENST00000497947 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
LMO7-213ENST00000497947 TMEM57Q8N5G2 664 aa11.14□□□□□ -0.63
LMO7-213ENST00000497947 RRAGDQ9NQL2 400 aaPredicted RBP11.14□□□□□ -0.63
LMO7-213ENST00000497947 TNNQ9UQP3 1299 aa11.14□□□□□ -0.63
LMO7-213ENST00000497947 MAP3K13O43283 966 aa11.13□□□□□ -0.63
LMO7-213ENST00000497947 RIPK4P57078 832 aa11.13□□□□□ -0.63
LMO7-213ENST00000497947 CLEC17AQ6ZS10 378 aa11.13□□□□□ -0.63
LMO7-213ENST00000497947 ANP32BQ92688 251 aaKnown RBP11.13□□□□□ -0.63
LMO7-213ENST00000497947 TRIM44Q96DX7 344 aaPredicted RBP11.13□□□□□ -0.63
LMO7-213ENST00000497947 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
LMO7-213ENST00000497947 WASLO00401 505 aaPredicted RBP11.12□□□□□ -0.63
LMO7-213ENST00000497947 PLSCR1O15162 318 aa11.12□□□□□ -0.63
LMO7-213ENST00000497947 ZC3H6P61129 1189 aaKnown RBP11.12□□□□□ -0.63
LMO7-213ENST00000497947 TSR2Q969E8 191 aaKnown RBP11.12□□□□□ -0.63
LMO7-213ENST00000497947 API5Q9BZZ5 524 aaKnown RBP11.12□□□□□ -0.63
LMO7-213ENST00000497947 THRAP3Q9Y2W1 955 aaKnown RBP11.12□□□□□ -0.63
LMO7-213ENST00000497947 DLC1Q96QB1 1528 aa11.12□□□□□ -0.63
LMO7-213ENST00000497947 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
LMO7-213ENST00000497947 PRR36Q9H6K5 1346 aa11.11□□□□□ -0.63
LMO7-213ENST00000497947 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
LMO7-213ENST00000497947 CDC45O75419 566 aa11.11□□□□□ -0.63
LMO7-213ENST00000497947 GABBR2O75899 941 aa11.11□□□□□ -0.63
LMO7-213ENST00000497947 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
LMO7-213ENST00000497947 CLCN6P51797 869 aa11.11□□□□□ -0.63
LMO7-213ENST00000497947 C1QTNF8P60827 252 aa11.11□□□□□ -0.63
LMO7-213ENST00000497947 GNAI1P63096 354 aa11.11□□□□□ -0.63
LMO7-213ENST00000497947 SRPK2P78362 688 aaKnown RBP11.11□□□□□ -0.63
LMO7-213ENST00000497947 CCDC173Q0VFZ6 552 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms