RNA–Protein interactions for RNA: ENST00000497697.5

SMTN-220, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-220ENST00000497697 SYT17Q9BSW7 474 aa28.29■■■□□ 2.12
SMTN-220ENST00000497697 ATP6V1AP38606 617 aa28.28■■■□□ 2.12
SMTN-220ENST00000497697 SMIM5Q71RC9 77 aa28.28■■■□□ 2.12
SMTN-220ENST00000497697 AK7Q96M32 723 aa28.27■■■□□ 2.12
SMTN-220ENST00000497697 SLC4A9Q96Q91 983 aa28.27■■■□□ 2.12
SMTN-220ENST00000497697 POLD1P28340 1107 aa28.25■■■□□ 2.11
SMTN-220ENST00000497697 AKAP4Q5JQC9 854 aa28.25■■■□□ 2.11
SMTN-220ENST00000497697 NFATC2IPQ8NCF5 419 aa28.25■■■□□ 2.11
SMTN-220ENST00000497697 U2SURPO15042 1029 aaKnown RBP28.24■■■□□ 2.11
SMTN-220ENST00000497697 MTHFSDQ2M296 383 aaKnown RBP28.24■■■□□ 2.11
SMTN-220ENST00000497697 MSL1Q68DK7 614 aa28.24■■■□□ 2.11
SMTN-220ENST00000497697 FLAD1Q8NFF5 587 aa28.24■■■□□ 2.11
SMTN-220ENST00000497697 UBR3Q6ZT12 1888 aa28.23■■■□□ 2.11
SMTN-220ENST00000497697 RBM42Q9BTD8 480 aaKnown RBP28.23■■■□□ 2.11
SMTN-220ENST00000497697 LGR6Q9HBX8 967 aa28.23■■■□□ 2.11
SMTN-220ENST00000497697 PHF14O94880 888 aa28.22■■■□□ 2.11
SMTN-220ENST00000497697 SCN11AQ9UI33 1791 aa28.22■■■□□ 2.11
SMTN-220ENST00000497697 PPP2R1AP30153 589 aa28.21■■■□□ 2.11
SMTN-220ENST00000497697 MAP3K5Q99683 1374 aa28.21■■■□□ 2.11
SMTN-220ENST00000497697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.2■■■□□ 2.1
SMTN-220ENST00000497697 GNPATO15228 680 aa28.18■■■□□ 2.1
SMTN-220ENST00000497697 RNMTO43148 476 aaKnown RBP28.18■■■□□ 2.1
SMTN-220ENST00000497697 SSFA2P28290 1259 aa28.18■■■□□ 2.1
SMTN-220ENST00000497697 KLHL34Q8N239 644 aa28.18■■■□□ 2.1
SMTN-220ENST00000497697 ZNF831Q5JPB2 1677 aa28.17■■■□□ 2.1
SMTN-220ENST00000497697 DCAF8L1A6NGE4 600 aa28.17■■■□□ 2.1
SMTN-220ENST00000497697 PTCD1O75127 700 aaKnown RBP28.17■■■□□ 2.1
SMTN-220ENST00000497697 CFAP53Q96M91 514 aa28.17■■■□□ 2.1
SMTN-220ENST00000497697 SLC52A2Q9HAB3 445 aa28.17■■■□□ 2.1
SMTN-220ENST00000497697 MRC1P22897 1456 aa28.13■■■□□ 2.09
SMTN-220ENST00000497697 ADAMTS7Q9UKP4 1686 aa28.13■■■□□ 2.09
SMTN-220ENST00000497697 COL5A3P25940 1745 aaPredicted RBP28.12■■■□□ 2.09
SMTN-220ENST00000497697 VIRMAQ69YN4 1812 aaKnown RBP28.12■■■□□ 2.09
SMTN-220ENST00000497697 RC3H1Q5TC82 1133 aaKnown RBP28.11■■■□□ 2.09
SMTN-220ENST00000497697 NLGN2Q8NFZ4 835 aa28.11■■■□□ 2.09
SMTN-220ENST00000497697 RSPH6AQ9H0K4 717 aa28.11■■■□□ 2.09
SMTN-220ENST00000497697 CNTNAP4Q9C0A0 1308 aa28.11■■■□□ 2.09
SMTN-220ENST00000497697 SLC39A6Q13433 755 aa28.1■■■□□ 2.09
SMTN-220ENST00000497697 PHACTR3Q96KR7 559 aa28.1■■■□□ 2.09
SMTN-220ENST00000497697 PRKAR2BP31323 418 aa28.09■■■□□ 2.09
SMTN-220ENST00000497697 NUDCQ9Y266 331 aa28.09■■■□□ 2.09
SMTN-220ENST00000497697 RTCBQ9Y3I0 505 aaKnown RBP28.09■■■□□ 2.09
SMTN-220ENST00000497697 MYH14Q7Z406 1995 aaKnown RBP28.08■■■□□ 2.09
SMTN-220ENST00000497697 GAS2L2Q8NHY3 880 aa28.08■■■□□ 2.09
SMTN-220ENST00000497697 TJP1Q07157 1748 aa28.06■■■□□ 2.08
SMTN-220ENST00000497697 RPS6KA4O75676 772 aa28.06■■■□□ 2.08
SMTN-220ENST00000497697 U2AF1L5P0DN76 240 aaPredicted RBP28.06■■■□□ 2.08
SMTN-220ENST00000497697 YY1P25490 414 aa28.06■■■□□ 2.08
SMTN-220ENST00000497697 U2AF1Q01081 240 aaKnown RBP eCLIP28.06■■■□□ 2.08
SMTN-220ENST00000497697 TRAPPC3LQ5T215 181 aa28.06■■■□□ 2.08
SMTN-220ENST00000497697 IL17REQ8NFR9 667 aa28.06■■■□□ 2.08
SMTN-220ENST00000497697 GNAT3A8MTJ3 354 aa28.05■■■□□ 2.08
SMTN-220ENST00000497697 CRKLP46109 303 aaKnown RBP28.05■■■□□ 2.08
SMTN-220ENST00000497697 ARHGEF1Q92888 912 aaKnown RBP28.05■■■□□ 2.08
SMTN-220ENST00000497697 CICQ96RK0 1608 aaPredicted RBP28.03■■■□□ 2.08
SMTN-220ENST00000497697 DNAJC10Q8IXB1 793 aa28.03■■■□□ 2.08
SMTN-220ENST00000497697 KCPQ6ZWJ8 1503 aa28.02■■■□□ 2.08
SMTN-220ENST00000497697 ADRA2BP18089 450 aa28.02■■■□□ 2.08
SMTN-220ENST00000497697 GPR162Q16538 588 aa28.01■■■□□ 2.07
SMTN-220ENST00000497697 INTS5Q6P9B9 1019 aaKnown RBP28.01■■■□□ 2.07
SMTN-220ENST00000497697 FCHSD2O94868 740 aa28■■■□□ 2.07
SMTN-220ENST00000497697 CD2APQ9Y5K6 639 aa28■■■□□ 2.07
SMTN-220ENST00000497697 DDX10Q13206 875 aaKnown RBP27.99■■■□□ 2.07
SMTN-220ENST00000497697 RFC4P35249 363 aa27.98■■■□□ 2.07
SMTN-220ENST00000497697 TEFQ10587 303 aa27.98■■■□□ 2.07
SMTN-220ENST00000497697 PELP1Q8IZL8 1130 aaKnown RBP27.98■■■□□ 2.07
SMTN-220ENST00000497697 MMP10P09238 476 aa27.97■■■□□ 2.07
SMTN-220ENST00000497697 CYP19A1P11511 503 aaPredicted RBP27.97■■■□□ 2.07
SMTN-220ENST00000497697 GYS1P13807 737 aa27.97■■■□□ 2.07
SMTN-220ENST00000497697 UTRNP46939 3433 aa27.97■■■□□ 2.07
SMTN-220ENST00000497697 CEMIPQ8WUJ3 1361 aa27.97■■■□□ 2.07
SMTN-220ENST00000497697 C4AP0C0L4 1744 aa27.96■■■□□ 2.07
SMTN-220ENST00000497697 SIPA1L3O60292 1781 aaPredicted RBP27.96■■■□□ 2.07
SMTN-220ENST00000497697 UBR2Q8IWV8 1755 aa27.96■■■□□ 2.07
SMTN-220ENST00000497697 NLGN1Q8N2Q7 840 aa27.95■■■□□ 2.06
SMTN-220ENST00000497697 CCDC87Q9NVE4 849 aa27.95■■■□□ 2.06
SMTN-220ENST00000497697 YBX3P16989 372 aaKnown RBP eCLIP27.94■■■□□ 2.06
SMTN-220ENST00000497697 VSIG10Q8N0Z9 540 aa27.94■■■□□ 2.06
SMTN-220ENST00000497697 SRP68Q9UHB9 627 aaKnown RBP27.94■■■□□ 2.06
SMTN-220ENST00000497697 ZNF790Q6PG37 636 aa27.93■■■□□ 2.06
SMTN-220ENST00000497697 TTC5Q8N0Z6 440 aa27.93■■■□□ 2.06
SMTN-220ENST00000497697 ZNF496Q96IT1 587 aaPredicted RBP27.92■■■□□ 2.06
SMTN-220ENST00000497697 MCM10Q7L590 875 aa27.91■■■□□ 2.06
SMTN-220ENST00000497697 ZBTB1Q9Y2K1 713 aa27.91■■■□□ 2.06
SMTN-220ENST00000497697 SOS1Q07889 1333 aaPredicted RBP27.91■■■□□ 2.06
SMTN-220ENST00000497697 USP42Q9H9J4 1324 aaKnown RBP27.91■■■□□ 2.06
SMTN-220ENST00000497697 KCNQ3O43525 872 aa27.89■■■□□ 2.06
SMTN-220ENST00000497697 DCTN1Q14203 1278 aa27.89■■■□□ 2.06
SMTN-220ENST00000497697 RALBP1Q15311 655 aa27.89■■■□□ 2.06
SMTN-220ENST00000497697 CHD4Q14839 1912 aa27.88■■■□□ 2.05
SMTN-220ENST00000497697 FKBP8Q14318 412 aa27.88■■■□□ 2.05
SMTN-220ENST00000497697 RTF1Q92541 710 aaKnown RBP27.88■■■□□ 2.05
SMTN-220ENST00000497697 HEG1Q9ULI3 1381 aa27.87■■■□□ 2.05
SMTN-220ENST00000497697 GOLGB1Q14789 3259 aaKnown RBP27.87■■■□□ 2.05
SMTN-220ENST00000497697 BTBD11A6QL63 1104 aa27.87■■■□□ 2.05
SMTN-220ENST00000497697 PLEKHF1Q96S99 279 aa27.87■■■□□ 2.05
SMTN-220ENST00000497697 WWC3Q9ULE0 1092 aa27.85■■■□□ 2.05
SMTN-220ENST00000497697 HTATSF1O43719 755 aaKnown RBP27.84■■■□□ 2.05
SMTN-220ENST00000497697 CANXP27824 592 aaKnown RBP27.84■■■□□ 2.05
SMTN-220ENST00000497697 USPL1Q5W0Q7 1092 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms