RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 USP17L20D6RJB6 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 USP17L24Q0WX57 530 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 RNF217Q8TC41 542 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 NLRP3Q96P20 1036 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 SERTAD1Q9UHV2 236 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 DNMT3LQ9UJW3 386 aa11.71□□□□□ -0.53
ATP13A3-210ENST00000497567 ESCO1Q5FWF5 840 aa11.7□□□□□ -0.54
ATP13A3-210ENST00000497567 SIX5Q8N196 739 aa11.7□□□□□ -0.54
ATP13A3-210ENST00000497567 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
ATP13A3-210ENST00000497567 PBXIP1Q96AQ6 731 aa11.7□□□□□ -0.54
ATP13A3-210ENST00000497567 ZNF358Q9NW07 568 aa11.7□□□□□ -0.54
ATP13A3-210ENST00000497567 FAM196BA6NMK8 535 aa11.69□□□□□ -0.54
ATP13A3-210ENST00000497567 SFI1A8K8P3 1242 aa11.69□□□□□ -0.54
ATP13A3-210ENST00000497567 WASLO00401 505 aaPredicted RBP11.69□□□□□ -0.54
ATP13A3-210ENST00000497567 RNF144AP50876 292 aaPredicted RBP11.69□□□□□ -0.54
ATP13A3-210ENST00000497567 CENPCQ03188 943 aa11.69□□□□□ -0.54
ATP13A3-210ENST00000497567 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
ATP13A3-210ENST00000497567 GRIP2Q9C0E4 1043 aa11.68□□□□□ -0.54
ATP13A3-210ENST00000497567 DPYDQ12882 1025 aa11.67□□□□□ -0.54
ATP13A3-210ENST00000497567 ZNF787Q6DD87 383 aa11.67□□□□□ -0.54
ATP13A3-210ENST00000497567 ARXQ96QS3 562 aa11.67□□□□□ -0.54
ATP13A3-210ENST00000497567 MAN1A2O60476 641 aa11.66□□□□□ -0.54
ATP13A3-210ENST00000497567 GPC1P35052 558 aa11.66□□□□□ -0.54
ATP13A3-210ENST00000497567 PRICKLE2Q7Z3G6 844 aa11.66□□□□□ -0.54
ATP13A3-210ENST00000497567 ANKMY2Q8IV38 441 aa11.66□□□□□ -0.54
ATP13A3-210ENST00000497567 SLC4A9Q96Q91 983 aa11.66□□□□□ -0.54
ATP13A3-210ENST00000497567 TLR1Q15399 786 aa11.65□□□□□ -0.54
ATP13A3-210ENST00000497567 SLC27A3Q5K4L6 730 aa11.65□□□□□ -0.54
ATP13A3-210ENST00000497567 ZMIZ1Q9ULJ6 1067 aa11.65□□□□□ -0.54
ATP13A3-210ENST00000497567 ATG7O95352 703 aa11.64□□□□□ -0.55
ATP13A3-210ENST00000497567 SMTNP53814 917 aa11.64□□□□□ -0.55
ATP13A3-210ENST00000497567 NOVA2Q9UNW9 492 aaKnown RBP11.64□□□□□ -0.55
ATP13A3-210ENST00000497567 RHOQP17081 205 aa11.63□□□□□ -0.55
ATP13A3-210ENST00000497567 LYSMD3Q7Z3D4 306 aa11.63□□□□□ -0.55
ATP13A3-210ENST00000497567 TNS4Q8IZW8 715 aa11.63□□□□□ -0.55
ATP13A3-210ENST00000497567 TSEN2Q8NCE0 465 aaKnown RBP11.63□□□□□ -0.55
ATP13A3-210ENST00000497567 ZSCAN10Q96SZ4 725 aaPredicted RBP11.63□□□□□ -0.55
ATP13A3-210ENST00000497567 USP3Q9Y6I4 520 aa11.63□□□□□ -0.55
ATP13A3-210ENST00000497567 A6NJY4 79 aa11.62□□□□□ -0.55
ATP13A3-210ENST00000497567 LGR5O75473 907 aa11.62□□□□□ -0.55
ATP13A3-210ENST00000497567 EPHA4P54764 986 aa11.62□□□□□ -0.55
ATP13A3-210ENST00000497567 SEC13P55735 322 aa11.62□□□□□ -0.55
ATP13A3-210ENST00000497567 POU4F2Q12837 409 aa11.62□□□□□ -0.55
ATP13A3-210ENST00000497567 STK32AQ8WU08 396 aa11.62□□□□□ -0.55
ATP13A3-210ENST00000497567 BACH1O14867 736 aa11.61□□□□□ -0.55
ATP13A3-210ENST00000497567 MTFR1Q15390 333 aa11.61□□□□□ -0.55
ATP13A3-210ENST00000497567 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.61□□□□□ -0.55
ATP13A3-210ENST00000497567 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
ATP13A3-210ENST00000497567 ELOAQ14241 798 aaKnown RBP11.6□□□□□ -0.55
ATP13A3-210ENST00000497567 FAM200AQ8TCP9 573 aa11.6□□□□□ -0.55
ATP13A3-210ENST00000497567 IQSEC3Q9UPP2 1182 aaPredicted RBP11.6□□□□□ -0.55
ATP13A3-210ENST00000497567 M0R2N6 131 aa11.59□□□□□ -0.55
ATP13A3-210ENST00000497567 PPP1R15AO75807 674 aaPredicted RBP11.59□□□□□ -0.55
ATP13A3-210ENST00000497567 TBCELQ5QJ74 424 aa11.59□□□□□ -0.55
ATP13A3-210ENST00000497567 TMEM214Q6NUQ4 689 aaKnown RBP11.59□□□□□ -0.55
ATP13A3-210ENST00000497567 PPARGC1BQ86YN6 1023 aaKnown RBP11.59□□□□□ -0.55
ATP13A3-210ENST00000497567 SPATA31C2B4DYI2 1134 aa11.58□□□□□ -0.56
ATP13A3-210ENST00000497567 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
ATP13A3-210ENST00000497567 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
ATP13A3-210ENST00000497567 SCHIP1Q9P0W5 487 aaPredicted RBP11.58□□□□□ -0.56
ATP13A3-210ENST00000497567 CDK2AP1O14519 115 aa11.57□□□□□ -0.56
ATP13A3-210ENST00000497567 PHKA2P46019 1235 aa11.57□□□□□ -0.56
ATP13A3-210ENST00000497567 FOXK2Q01167 660 aa11.57□□□□□ -0.56
ATP13A3-210ENST00000497567 PTSQ03393 145 aa11.57□□□□□ -0.56
ATP13A3-210ENST00000497567 C4orf17Q53FE4 359 aa11.57□□□□□ -0.56
ATP13A3-210ENST00000497567 ZNF295-AS1Q8N0V1 137 aa11.57□□□□□ -0.56
ATP13A3-210ENST00000497567 SENP3-EIF4A1A0A087X0R7 540 aa11.56□□□□□ -0.56
ATP13A3-210ENST00000497567 TMEM164Q5U3C3 297 aa11.56□□□□□ -0.56
ATP13A3-210ENST00000497567 SLC9A9Q8IVB4 645 aa11.56□□□□□ -0.56
ATP13A3-210ENST00000497567 GAS2L2Q8NHY3 880 aa11.56□□□□□ -0.56
ATP13A3-210ENST00000497567 HINFPQ9BQA5 517 aa11.56□□□□□ -0.56
ATP13A3-210ENST00000497567 TSPAN10Q9H1Z9 355 aaPredicted RBP11.56□□□□□ -0.56
ATP13A3-210ENST00000497567 FAM69CQ0P6D2 419 aa11.55□□□□□ -0.56
ATP13A3-210ENST00000497567 TAS1R3Q7RTX0 852 aa11.55□□□□□ -0.56
ATP13A3-210ENST00000497567 RHBDD1Q8TEB9 315 aa11.55□□□□□ -0.56
ATP13A3-210ENST00000497567 GNASQ5JWF2 1037 aa11.54□□□□□ -0.56
ATP13A3-210ENST00000497567 SLC35F4A4IF30 521 aa11.53□□□□□ -0.56
ATP13A3-210ENST00000497567 C21orf2O43822 256 aa11.53□□□□□ -0.56
ATP13A3-210ENST00000497567 GTF2E1P29083 439 aaPredicted RBP11.53□□□□□ -0.56
ATP13A3-210ENST00000497567 CARNS1A5YM72 827 aa11.52□□□□□ -0.57
ATP13A3-210ENST00000497567 ZDHHC1Q8WTX9 485 aa11.52□□□□□ -0.57
ATP13A3-210ENST00000497567 CABP1Q9NZU7 370 aa11.52□□□□□ -0.57
ATP13A3-210ENST00000497567 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
ATP13A3-210ENST00000497567 ACIN1Q9UKV3 1341 aaKnown RBP11.52□□□□□ -0.57
ATP13A3-210ENST00000497567 PLA2G4AP47712 749 aa11.51□□□□□ -0.57
ATP13A3-210ENST00000497567 NIFKQ9BYG3 293 aaKnown RBP11.51□□□□□ -0.57
ATP13A3-210ENST00000497567 TIMMDC1Q9NPL8 285 aa11.51□□□□□ -0.57
ATP13A3-210ENST00000497567 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
ATP13A3-210ENST00000497567 VEGFBP49765 207 aa11.5□□□□□ -0.57
ATP13A3-210ENST00000497567 WDR44Q5JSH3 913 aa11.5□□□□□ -0.57
ATP13A3-210ENST00000497567 SH3PXD2AQ5TCZ1 1133 aa11.5□□□□□ -0.57
ATP13A3-210ENST00000497567 CCDC155Q8N6L0 562 aa11.5□□□□□ -0.57
ATP13A3-210ENST00000497567 SCG3Q8WXD2 468 aaKnown RBP11.5□□□□□ -0.57
ATP13A3-210ENST00000497567 ATAD2Q6PL18 1390 aa11.5□□□□□ -0.57
ATP13A3-210ENST00000497567 TMEM88BA6NKF7 163 aa11.48□□□□□ -0.57
ATP13A3-210ENST00000497567 PPFIA3O75145 1194 aa11.48□□□□□ -0.57
ATP13A3-210ENST00000497567 SWI5Q1ZZU3 235 aa11.48□□□□□ -0.57
ATP13A3-210ENST00000497567 PRIMPOLQ96LW4 560 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms