RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CCDC181Q5TID7 509 aa8.53□□□□□ -1.04
BRCA1-224ENST00000497488 JAZF1Q86VZ6 243 aa8.53□□□□□ -1.04
BRCA1-224ENST00000497488 CITED4Q96RK1 184 aa8.53□□□□□ -1.04
BRCA1-224ENST00000497488 KCNK17Q96T54 332 aa8.53□□□□□ -1.04
BRCA1-224ENST00000497488 IBSPP21815 317 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-224ENST00000497488 PSME1Q06323 249 aa8.52□□□□□ -1.05
BRCA1-224ENST00000497488 EHHADHQ08426 723 aa8.52□□□□□ -1.05
BRCA1-224ENST00000497488 SPNS2Q8IVW8 549 aa8.52□□□□□ -1.05
BRCA1-224ENST00000497488 GPKOWQ92917 476 aaPredicted RBP eCLIP8.52□□□□□ -1.05
BRCA1-224ENST00000497488 PRKD2Q9BZL6 878 aa8.52□□□□□ -1.05
BRCA1-224ENST00000497488 KIAA1468Q9P260 1216 aa8.52□□□□□ -1.05
BRCA1-224ENST00000497488 SLC27A5Q9Y2P5 690 aa8.52□□□□□ -1.05
BRCA1-224ENST00000497488 PCDHGA11Q9Y5H2 935 aa8.52□□□□□ -1.05
BRCA1-224ENST00000497488 NAA30Q147X3 362 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-224ENST00000497488 ANKRD13DQ6ZTN6 518 aa8.51□□□□□ -1.05
BRCA1-224ENST00000497488 VTI1AQ96AJ9 217 aa8.51□□□□□ -1.05
BRCA1-224ENST00000497488 SLC52A1Q9NWF4 448 aa8.51□□□□□ -1.05
BRCA1-224ENST00000497488 INPP5FQ9Y2H2 1132 aa8.51□□□□□ -1.05
BRCA1-224ENST00000497488 MPSTP25325 297 aa8.5□□□□□ -1.05
BRCA1-224ENST00000497488 HSD3B2P26439 372 aa8.5□□□□□ -1.05
BRCA1-224ENST00000497488 ANAPC15P60006 121 aa8.5□□□□□ -1.05
BRCA1-224ENST00000497488 PDE3BQ13370 1112 aa8.5□□□□□ -1.05
BRCA1-224ENST00000497488 ADAM32Q8TC27 787 aa8.5□□□□□ -1.05
BRCA1-224ENST00000497488 TMC1Q8TDI8 760 aa8.5□□□□□ -1.05
BRCA1-224ENST00000497488 DMRTB1Q96MA1 342 aa8.5□□□□□ -1.05
BRCA1-224ENST00000497488 DMGDHQ9UI17 866 aaKnown RBP8.5□□□□□ -1.05
BRCA1-224ENST00000497488 WWC3Q9ULE0 1092 aa8.5□□□□□ -1.05
BRCA1-224ENST00000497488 NOP58Q9Y2X3 529 aaKnown RBP8.5□□□□□ -1.05
BRCA1-224ENST00000497488 EMILIN1Q9Y6C2 1016 aa8.5□□□□□ -1.05
BRCA1-224ENST00000497488 M0R2N6 131 aa8.49□□□□□ -1.05
BRCA1-224ENST00000497488 IGHA2P01877 340 aa8.49□□□□□ -1.05
BRCA1-224ENST00000497488 HDGFP51858 240 aaKnown RBP8.49□□□□□ -1.05
BRCA1-224ENST00000497488 ATP2B2Q01814 1243 aa8.49□□□□□ -1.05
BRCA1-224ENST00000497488 BMS1Q14692 1282 aaKnown RBP8.49□□□□□ -1.05
BRCA1-224ENST00000497488 PTPRNQ16849 979 aa8.49□□□□□ -1.05
BRCA1-224ENST00000497488 TSEN2Q8NCE0 465 aaKnown RBP8.49□□□□□ -1.05
BRCA1-224ENST00000497488 ZCRB1Q8TBF4 217 aaKnown RBP8.49□□□□□ -1.05
BRCA1-224ENST00000497488 UBE2Q2Q8WVN8 375 aa8.49□□□□□ -1.05
BRCA1-224ENST00000497488 CTHP32929 405 aa8.48□□□□□ -1.05
BRCA1-224ENST00000497488 RNF19BQ6ZMZ0 732 aa8.48□□□□□ -1.05
BRCA1-224ENST00000497488 MCF2L2Q86YR7 1114 aa8.48□□□□□ -1.05
BRCA1-224ENST00000497488 ARMC2Q8NEN0 867 aa8.48□□□□□ -1.05
BRCA1-224ENST00000497488 ZNF526Q8TF50 670 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-224ENST00000497488 USB1Q9BQ65 265 aaKnown RBP8.48□□□□□ -1.05
BRCA1-224ENST00000497488 MYH16Q9H6N6 1097 aa8.48□□□□□ -1.05
BRCA1-224ENST00000497488 DDX41Q9UJV9 622 aaKnown RBP8.48□□□□□ -1.05
BRCA1-224ENST00000497488 TPD52L2O43399 206 aaKnown RBP8.47□□□□□ -1.05
BRCA1-224ENST00000497488 STK10O94804 968 aaKnown RBP8.47□□□□□ -1.05
BRCA1-224ENST00000497488 CLSTN1O94985 981 aa8.47□□□□□ -1.05
BRCA1-224ENST00000497488 PARNO95453 639 aaKnown RBP8.47□□□□□ -1.05
BRCA1-224ENST00000497488 RNF187Q5TA31 235 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-224ENST00000497488 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
BRCA1-224ENST00000497488 SETDB2Q96T68 719 aa8.47□□□□□ -1.05
BRCA1-224ENST00000497488 MRPL42Q9Y6G3 142 aaKnown RBP8.47□□□□□ -1.05
BRCA1-224ENST00000497488 GPR182O15218 404 aa8.46□□□□□ -1.06
BRCA1-224ENST00000497488 PUS10Q3MIT2 529 aaKnown RBP8.46□□□□□ -1.06
BRCA1-224ENST00000497488 KMT5BQ4FZB7 885 aa8.46□□□□□ -1.06
BRCA1-224ENST00000497488 NBPF14Q5TI25 921 aa8.46□□□□□ -1.06
BRCA1-224ENST00000497488 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.06
BRCA1-224ENST00000497488 ALKBH8Q96BT7 664 aaKnown RBP8.46□□□□□ -1.06
BRCA1-224ENST00000497488 FAM129BQ96TA1 746 aa8.46□□□□□ -1.06
BRCA1-224ENST00000497488 ZBED2Q9BTP6 218 aa8.46□□□□□ -1.06
BRCA1-224ENST00000497488 CYLDQ9NQC7 956 aa8.46□□□□□ -1.06
BRCA1-224ENST00000497488 FOXO3O43524 673 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 FZD6O60353 706 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 FGRP09769 529 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 JUNDP17535 347 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 IGFBP4P22692 258 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 RACK1P63244 317 aaKnown RBP8.45□□□□□ -1.06
BRCA1-224ENST00000497488 ZNF394Q53GI3 561 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 BLOC1S3Q6QNY0 202 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 VPS37DQ86XT2 251 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 GAS2L2Q8NHY3 880 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 ARHGAP9Q9BRR9 750 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 CCDC87Q9NVE4 849 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 COL4A3BPQ9Y5P4 624 aa8.45□□□□□ -1.06
BRCA1-224ENST00000497488 TK2O00142 265 aa8.44□□□□□ -1.06
BRCA1-224ENST00000497488 HRO43593 1189 aa8.44□□□□□ -1.06
BRCA1-224ENST00000497488 MMRN1Q13201 1228 aa8.44□□□□□ -1.06
BRCA1-224ENST00000497488 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
BRCA1-224ENST00000497488 NFE2L2Q16236 605 aa8.44□□□□□ -1.06
BRCA1-224ENST00000497488 TMED8Q6PL24 325 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-224ENST00000497488 DZIP3Q86Y13 1208 aaKnown RBP8.44□□□□□ -1.06
BRCA1-224ENST00000497488 CRELD1Q96HD1 420 aa8.44□□□□□ -1.06
BRCA1-224ENST00000497488 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
BRCA1-224ENST00000497488 PCDHGB7Q9Y5F8 929 aa8.44□□□□□ -1.06
BRCA1-224ENST00000497488 XRCC5P13010 732 aaKnown RBP8.43□□□□□ -1.06
BRCA1-224ENST00000497488 GNA15P30679 374 aa8.43□□□□□ -1.06
BRCA1-224ENST00000497488 EIF1AXP47813 144 aaKnown RBP8.43□□□□□ -1.06
BRCA1-224ENST00000497488 GORABQ5T7V8 394 aa8.43□□□□□ -1.06
BRCA1-224ENST00000497488 RNF20Q5VTR2 975 aa8.43□□□□□ -1.06
BRCA1-224ENST00000497488 ALG1LQ6GMV1 187 aa8.43□□□□□ -1.06
BRCA1-224ENST00000497488 MRFAP1L1Q96HT8 127 aa8.43□□□□□ -1.06
BRCA1-224ENST00000497488 KCNH8Q96L42 1107 aa8.43□□□□□ -1.06
BRCA1-224ENST00000497488 SLC4A5Q9BY07 1137 aa8.43□□□□□ -1.06
BRCA1-224ENST00000497488 SEPT9Q9UHD8 586 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-224ENST00000497488 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-224ENST00000497488 ESPNB1AK53 854 aa8.42□□□□□ -1.06
BRCA1-224ENST00000497488 ACTN4O43707 911 aaKnown RBP8.42□□□□□ -1.06
BRCA1-224ENST00000497488 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms