RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 LOC102724428A0A0B4J2F2 783 aa14.85□□□□□ -0.03
TOM1-217ENST00000497448 SLC34A2O95436 690 aa14.85□□□□□ -0.03
TOM1-217ENST00000497448 DPEP1P16444 411 aa14.85□□□□□ -0.03
TOM1-217ENST00000497448 SIK1P57059 783 aa14.85□□□□□ -0.03
TOM1-217ENST00000497448 PIGBQ92521 554 aa14.85□□□□□ -0.03
TOM1-217ENST00000497448 COL5A3P25940 1745 aaPredicted RBP14.85□□□□□ -0.03
TOM1-217ENST00000497448 KDM2BQ8NHM5 1336 aa14.85□□□□□ -0.03
TOM1-217ENST00000497448 ITPK1Q13572 414 aa14.84□□□□□ -0.03
TOM1-217ENST00000497448 RRS1Q15050 365 aaKnown RBP14.84□□□□□ -0.03
TOM1-217ENST00000497448 SMC1BQ8NDV3 1235 aa14.83□□□□□ -0.04
TOM1-217ENST00000497448 ZNF831Q5JPB2 1677 aa14.82□□□□□ -0.04
TOM1-217ENST00000497448 RRAGCQ9HB90 399 aa14.82□□□□□ -0.04
TOM1-217ENST00000497448 KIF20BQ96Q89 1820 aa14.82□□□□□ -0.04
TOM1-217ENST00000497448 TIAM2Q8IVF5 1701 aa14.81□□□□□ -0.04
TOM1-217ENST00000497448 CCDC87Q9NVE4 849 aa14.81□□□□□ -0.04
TOM1-217ENST00000497448 RNF181Q9P0P0 153 aa14.81□□□□□ -0.04
TOM1-217ENST00000497448 INSRP06213 1382 aa14.81□□□□□ -0.04
TOM1-217ENST00000497448 KDRP35968 1356 aa14.81□□□□□ -0.04
TOM1-217ENST00000497448 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
TOM1-217ENST00000497448 KCNA3P22001 575 aa14.8□□□□□ -0.04
TOM1-217ENST00000497448 DCAF5Q96JK2 942 aa14.8□□□□□ -0.04
TOM1-217ENST00000497448 FLT4P35916 1363 aa14.79□□□□□ -0.04
TOM1-217ENST00000497448 ATP6V1AP38606 617 aa14.79□□□□□ -0.04
TOM1-217ENST00000497448 NKX1-1Q15270 411 aaPredicted RBP14.79□□□□□ -0.04
TOM1-217ENST00000497448 ASAP1Q9ULH1 1129 aa14.79□□□□□ -0.04
TOM1-217ENST00000497448 TMF1P82094 1093 aa14.78□□□□□ -0.04
TOM1-217ENST00000497448 HSP90AB2PQ58FF8 381 aa14.78□□□□□ -0.04
TOM1-217ENST00000497448 NLGN1Q8N2Q7 840 aa14.78□□□□□ -0.04
TOM1-217ENST00000497448 ANKRD26Q9UPS8 1709 aa14.78□□□□□ -0.04
TOM1-217ENST00000497448 GYS1P13807 737 aa14.77□□□□□ -0.05
TOM1-217ENST00000497448 PUS7Q96PZ0 661 aaKnown RBP14.77□□□□□ -0.05
TOM1-217ENST00000497448 CARD11Q9BXL7 1154 aa14.77□□□□□ -0.05
TOM1-217ENST00000497448 TMOD3Q9NYL9 352 aa14.77□□□□□ -0.05
TOM1-217ENST00000497448 RTCBQ9Y3I0 505 aaKnown RBP14.77□□□□□ -0.05
TOM1-217ENST00000497448 MYH14Q7Z406 1995 aaKnown RBP14.76□□□□□ -0.05
TOM1-217ENST00000497448 KDM6AO15550 1401 aaPredicted RBP14.76□□□□□ -0.05
TOM1-217ENST00000497448 TRAPPC3LQ5T215 181 aa14.76□□□□□ -0.05
TOM1-217ENST00000497448 SIN3AQ96ST3 1273 aa14.76□□□□□ -0.05
TOM1-217ENST00000497448 PIM2Q9P1W9 311 aa14.76□□□□□ -0.05
TOM1-217ENST00000497448 PARP3Q9Y6F1 533 aa14.76□□□□□ -0.05
TOM1-217ENST00000497448 KIF24Q5T7B8 1368 aa14.75□□□□□ -0.05
TOM1-217ENST00000497448 DALRD3Q5D0E6 543 aaKnown RBP14.75□□□□□ -0.05
TOM1-217ENST00000497448 ARHGEF1Q92888 912 aaKnown RBP14.75□□□□□ -0.05
TOM1-217ENST00000497448 GGNBP2Q9H3C7 697 aa14.75□□□□□ -0.05
TOM1-217ENST00000497448 DLEC1Q9Y238 1755 aa14.75□□□□□ -0.05
TOM1-217ENST00000497448 ZC3H4Q9UPT8 1303 aaKnown RBP14.74□□□□□ -0.05
TOM1-217ENST00000497448 ADRA2BP18089 450 aa14.74□□□□□ -0.05
TOM1-217ENST00000497448 ATG3Q9NT62 314 aa14.74□□□□□ -0.05
TOM1-217ENST00000497448 CCDC88AQ3V6T2 1871 aa14.74□□□□□ -0.05
TOM1-217ENST00000497448 RASSF7Q02833 373 aa14.73□□□□□ -0.05
TOM1-217ENST00000497448 SLC4A9Q96Q91 983 aa14.73□□□□□ -0.05
TOM1-217ENST00000497448 CNTNAP4Q9C0A0 1308 aa14.72□□□□□ -0.05
TOM1-217ENST00000497448 FYB1O15117 783 aa14.72□□□□□ -0.05
TOM1-217ENST00000497448 SPG7Q9UQ90 795 aa14.72□□□□□ -0.05
TOM1-217ENST00000497448 ADAMTS7Q9UKP4 1686 aa14.71□□□□□ -0.05
TOM1-217ENST00000497448 CHRNA5P30532 468 aa14.71□□□□□ -0.05
TOM1-217ENST00000497448 RFC4P35249 363 aa14.71□□□□□ -0.05
TOM1-217ENST00000497448 TJP1Q07157 1748 aa14.7□□□□□ -0.06
TOM1-217ENST00000497448 GLTPD2A6NH11 291 aa14.7□□□□□ -0.06
TOM1-217ENST00000497448 VEGFAP15692 232 aaPredicted RBP14.7□□□□□ -0.06
TOM1-217ENST00000497448 PHKG2P15735 406 aa14.7□□□□□ -0.06
TOM1-217ENST00000497448 DDR1Q08345 913 aa14.7□□□□□ -0.06
TOM1-217ENST00000497448 NEUROD1Q13562 356 aa14.7□□□□□ -0.06
TOM1-217ENST00000497448 RC3H1Q5TC82 1133 aaKnown RBP14.7□□□□□ -0.06
TOM1-217ENST00000497448 AFDNP55196 1824 aaKnown RBP14.7□□□□□ -0.06
TOM1-217ENST00000497448 TONSLQ96HA7 1378 aa14.7□□□□□ -0.06
TOM1-217ENST00000497448 RPS6KA4O75676 772 aa14.69□□□□□ -0.06
TOM1-217ENST00000497448 TESK2Q96S53 571 aa14.69□□□□□ -0.06
TOM1-217ENST00000497448 FOXN1O15353 648 aa14.68□□□□□ -0.06
TOM1-217ENST00000497448 IFNL2Q8IZJ0 200 aa14.68□□□□□ -0.06
TOM1-217ENST00000497448 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
TOM1-217ENST00000497448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.68□□□□□ -0.06
TOM1-217ENST00000497448 SRP68Q9UHB9 627 aaKnown RBP14.68□□□□□ -0.06
TOM1-217ENST00000497448 EMILIN1Q9Y6C2 1016 aa14.68□□□□□ -0.06
TOM1-217ENST00000497448 NRXN2Q9P2S2 1712 aa14.68□□□□□ -0.06
TOM1-217ENST00000497448 USP42Q9H9J4 1324 aaKnown RBP14.67□□□□□ -0.06
TOM1-217ENST00000497448 LMNB1P20700 586 aa14.67□□□□□ -0.06
TOM1-217ENST00000497448 MKRN1Q9UHC7 482 aaKnown RBP14.67□□□□□ -0.06
TOM1-217ENST00000497448 DICER1Q9UPY3 1922 aaKnown RBP14.66□□□□□ -0.06
TOM1-217ENST00000497448 FKBP8Q14318 412 aa14.66□□□□□ -0.06
TOM1-217ENST00000497448 VIRMAQ69YN4 1812 aaKnown RBP14.66□□□□□ -0.06
TOM1-217ENST00000497448 POTECB2RU33 542 aa14.65□□□□□ -0.06
TOM1-217ENST00000497448 POLRMTO00411 1230 aaKnown RBP14.65□□□□□ -0.06
TOM1-217ENST00000497448 PRDM10Q9NQV6 1147 aa14.65□□□□□ -0.06
TOM1-217ENST00000497448 CREBZFQ9NS37 354 aa14.65□□□□□ -0.06
TOM1-217ENST00000497448 FAM161AQ3B820 660 aa14.64□□□□□ -0.07
TOM1-217ENST00000497448 EYA1Q99502 592 aa14.64□□□□□ -0.07
TOM1-217ENST00000497448 CNTNAP1P78357 1384 aa14.63□□□□□ -0.07
TOM1-217ENST00000497448 ST20-MTHFSA0A0A6YYL1 179 aa14.62□□□□□ -0.07
TOM1-217ENST00000497448 NFKBIEO00221 500 aa14.62□□□□□ -0.07
TOM1-217ENST00000497448 CRKLP46109 303 aaKnown RBP14.62□□□□□ -0.07
TOM1-217ENST00000497448 FER1L6Q2WGJ9 1857 aa14.61□□□□□ -0.07
TOM1-217ENST00000497448 ERVV-2B6SEH9 535 aa14.61□□□□□ -0.07
TOM1-217ENST00000497448 PCDH10Q9P2E7 1040 aa14.61□□□□□ -0.07
TOM1-217ENST00000497448 PPM1GO15355 546 aaPredicted RBP14.6□□□□□ -0.07
TOM1-217ENST00000497448 TM4SF1P30408 202 aa14.6□□□□□ -0.07
TOM1-217ENST00000497448 CTCFP49711 727 aaPredicted RBP14.6□□□□□ -0.07
TOM1-217ENST00000497448 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
TOM1-217ENST00000497448 COL11A2P13942 1736 aaPredicted RBP14.6□□□□□ -0.07
TOM1-217ENST00000497448 WASHC2AQ641Q2 1341 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms