RNA–Protein interactions for RNA: ENST00000497221.1

DUSP28-205, Transcript of dual specificity phosphatase 28, humanhuman

TSL 2

Gene DUSP28, Length 488 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-205ENST00000497221 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
DUSP28-205ENST00000497221 TMC1Q8TDI8 760 aa8.11□□□□□ -1.11
DUSP28-205ENST00000497221 USP6P35125 1406 aa8.11□□□□□ -1.11
DUSP28-205ENST00000497221 MON2Q7Z3U7 1717 aa8.1□□□□□ -1.11
DUSP28-205ENST00000497221 LCE2BO14633 110 aa8.1□□□□□ -1.11
DUSP28-205ENST00000497221 SF3B2Q13435 895 aaKnown RBP8.1□□□□□ -1.11
DUSP28-205ENST00000497221 KRT27Q7Z3Y8 459 aa8.1□□□□□ -1.11
DUSP28-205ENST00000497221 PCDHGA10Q9Y5H3 936 aa8.1□□□□□ -1.11
DUSP28-205ENST00000497221 PIK3C2AO00443 1686 aa8.1□□□□□ -1.11
DUSP28-205ENST00000497221 USP19O94966 1318 aa8.09□□□□□ -1.11
DUSP28-205ENST00000497221 SPATA31A5Q5VU36 1347 aa8.09□□□□□ -1.11
DUSP28-205ENST00000497221 SPATA31A7Q8IWB4 1347 aa8.09□□□□□ -1.11
DUSP28-205ENST00000497221 GCP02774 474 aa8.09□□□□□ -1.11
DUSP28-205ENST00000497221 PPP4R3BQ5MIZ7 849 aa8.09□□□□□ -1.11
DUSP28-205ENST00000497221 CCDC125Q86Z20 511 aa8.09□□□□□ -1.11
DUSP28-205ENST00000497221 EPAS1Q99814 870 aa8.09□□□□□ -1.11
DUSP28-205ENST00000497221 USP35Q9P2H5 1018 aa8.09□□□□□ -1.11
DUSP28-205ENST00000497221 KTN1Q86UP2 1357 aaKnown RBP8.09□□□□□ -1.12
DUSP28-205ENST00000497221 SBNO2Q9Y2G9 1366 aa8.09□□□□□ -1.12
DUSP28-205ENST00000497221 TTC21BQ7Z4L5 1316 aa8.08□□□□□ -1.12
DUSP28-205ENST00000497221 HDGFL2Q7Z4V5 671 aaPredicted RBP8.08□□□□□ -1.12
DUSP28-205ENST00000497221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.08□□□□□ -1.12
DUSP28-205ENST00000497221 FBXW7Q969H0 707 aa8.08□□□□□ -1.12
DUSP28-205ENST00000497221 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
DUSP28-205ENST00000497221 LTN1O94822 1766 aa8.07□□□□□ -1.12
DUSP28-205ENST00000497221 SPATA31A1Q5TZJ5 1347 aa8.07□□□□□ -1.12
DUSP28-205ENST00000497221 TTC21AQ8NDW8 1320 aa8.07□□□□□ -1.12
DUSP28-205ENST00000497221 ST20-MTHFSA0A0A6YYL1 179 aa8.07□□□□□ -1.12
DUSP28-205ENST00000497221 ONECUT3O60422 494 aaPredicted RBP8.07□□□□□ -1.12
DUSP28-205ENST00000497221 TYW1BQ6NUM6 668 aa8.07□□□□□ -1.12
DUSP28-205ENST00000497221 LMO7Q8WWI1 1683 aa8.07□□□□□ -1.12
DUSP28-205ENST00000497221 CAMTA1Q9Y6Y1 1673 aa8.07□□□□□ -1.12
DUSP28-205ENST00000497221 CPDO75976 1380 aa8.07□□□□□ -1.12
DUSP28-205ENST00000497221 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
DUSP28-205ENST00000497221 BLMP54132 1417 aaPredicted RBP8.06□□□□□ -1.12
DUSP28-205ENST00000497221 SSH2Q76I76 1423 aa8.06□□□□□ -1.12
DUSP28-205ENST00000497221 THSD7AQ9UPZ6 1657 aa8.06□□□□□ -1.12
DUSP28-205ENST00000497221 TESPA1A2RU30 521 aaPredicted RBP8.06□□□□□ -1.12
DUSP28-205ENST00000497221 LARP1Q6PKG0 1096 aaKnown RBP8.06□□□□□ -1.12
DUSP28-205ENST00000497221 ZNF454Q8N9F8 522 aa8.06□□□□□ -1.12
DUSP28-205ENST00000497221 KCNH5Q8NCM2 988 aa8.06□□□□□ -1.12
DUSP28-205ENST00000497221 ZDHHC16Q969W1 377 aa8.06□□□□□ -1.12
DUSP28-205ENST00000497221 TERF2IPQ9NYB0 399 aa8.06□□□□□ -1.12
DUSP28-205ENST00000497221 SLIT3O75094 1523 aa8.06□□□□□ -1.12
DUSP28-205ENST00000497221 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
DUSP28-205ENST00000497221 COL18A1P39060 1754 aa8.05□□□□□ -1.12
DUSP28-205ENST00000497221 PDE3BQ13370 1112 aa8.05□□□□□ -1.12
DUSP28-205ENST00000497221 FAM182BQ5T319 152 aa8.05□□□□□ -1.12
DUSP28-205ENST00000497221 THSD4Q6ZMP0 1018 aa8.05□□□□□ -1.12
DUSP28-205ENST00000497221 TCP11L2Q8N4U5 519 aa8.05□□□□□ -1.12
DUSP28-205ENST00000497221 CCER1Q8TC90 406 aaPredicted RBP8.05□□□□□ -1.12
DUSP28-205ENST00000497221 SLC12A5Q9H2X9 1139 aa8.05□□□□□ -1.12
DUSP28-205ENST00000497221 USP47Q96K76 1375 aa8.05□□□□□ -1.12
DUSP28-205ENST00000497221 CLSPNQ9HAW4 1339 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 WNK3Q9BYP7 1800 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 CSB-PGBD3P0DP91 1061 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 OSBPP22059 807 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 BAG6P46379 1132 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 TMF1P82094 1093 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 TOM1L2Q6ZVM7 507 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 DEFB132Q7Z7B7 95 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 ADAM33Q9BZ11 813 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 TIMELESSQ9UNS1 1208 aa8.04□□□□□ -1.12
DUSP28-205ENST00000497221 COL5A2P05997 1499 aaPredicted RBP8.04□□□□□ -1.12
DUSP28-205ENST00000497221 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
DUSP28-205ENST00000497221 USP54Q70EL1 1684 aa8.03□□□□□ -1.12
DUSP28-205ENST00000497221 A0A1W2PP64 1363 aa8.03□□□□□ -1.12
DUSP28-205ENST00000497221 AATKQ6ZMQ8 1374 aa8.03□□□□□ -1.12
DUSP28-205ENST00000497221 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
DUSP28-205ENST00000497221 BARGINQ6ZT62 677 aa8.03□□□□□ -1.12
DUSP28-205ENST00000497221 NME9Q86XW9 330 aa8.03□□□□□ -1.12
DUSP28-205ENST00000497221 PUS7Q96PZ0 661 aaKnown RBP8.03□□□□□ -1.12
DUSP28-205ENST00000497221 TESK2Q96S53 571 aa8.03□□□□□ -1.12
DUSP28-205ENST00000497221 SLC4A5Q9BY07 1137 aa8.03□□□□□ -1.12
DUSP28-205ENST00000497221 THRAP3Q9Y2W1 955 aaKnown RBP8.03□□□□□ -1.12
DUSP28-205ENST00000497221 CRB1P82279 1406 aa8.03□□□□□ -1.12
DUSP28-205ENST00000497221 EDC4Q6P2E9 1401 aaKnown RBP8.03□□□□□ -1.12
DUSP28-205ENST00000497221 CD163L1Q9NR16 1453 aa8.02□□□□□ -1.13
DUSP28-205ENST00000497221 NINLQ9Y2I6 1382 aa8.02□□□□□ -1.13
DUSP28-205ENST00000497221 SBF2Q86WG5 1849 aa8.02□□□□□ -1.13
DUSP28-205ENST00000497221 SEMA3EO15041 775 aa8.02□□□□□ -1.13
DUSP28-205ENST00000497221 EN1Q05925 392 aaPredicted RBP8.02□□□□□ -1.13
DUSP28-205ENST00000497221 FAM196AQ6ZSG2 479 aa8.02□□□□□ -1.13
DUSP28-205ENST00000497221 ARHGEF25Q86VW2 580 aa8.02□□□□□ -1.13
DUSP28-205ENST00000497221 DDX12PQ92771 950 aa8.02□□□□□ -1.13
DUSP28-205ENST00000497221 VPS9D1Q9Y2B5 631 aa8.02□□□□□ -1.13
DUSP28-205ENST00000497221 TNS1Q9HBL0 1735 aaKnown RBP8.02□□□□□ -1.13
DUSP28-205ENST00000497221 NFAT5O94916 1531 aa8.02□□□□□ -1.13
DUSP28-205ENST00000497221 KIF20BQ96Q89 1820 aa8.01□□□□□ -1.13
DUSP28-205ENST00000497221 USP31Q70CQ4 1352 aa8.01□□□□□ -1.13
DUSP28-205ENST00000497221 TRIM37O94972 964 aa8.01□□□□□ -1.13
DUSP28-205ENST00000497221 MLLT3P42568 568 aaPredicted RBP8.01□□□□□ -1.13
DUSP28-205ENST00000497221 PRIM1P49642 420 aaKnown RBP8.01□□□□□ -1.13
DUSP28-205ENST00000497221 CDCA8Q53HL2 280 aa8.01□□□□□ -1.13
DUSP28-205ENST00000497221 COG3Q96JB2 828 aa8.01□□□□□ -1.13
DUSP28-205ENST00000497221 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
DUSP28-205ENST00000497221 SRCAPQ6ZRS2 3230 aa8.01□□□□□ -1.13
DUSP28-205ENST00000497221 WDR17Q8IZU2 1322 aa8.01□□□□□ -1.13
DUSP28-205ENST00000497221 DDB1Q16531 1140 aa8□□□□□ -1.13
DUSP28-205ENST00000497221 LRRC37A3O60309 1634 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms